RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 SV2CQ496J9 727 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 ANKRD20A4Q4UJ75 823 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 AGKQ53H12 422 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 AGAP9Q5VTM2 703 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 PPP4R4Q6NUP7 873 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 DRAXINQ8NBI3 349 aaPredicted RBP8.18□□□□□ -1.1
HPS4-205ENST00000429411 DNAJC1Q96KC8 554 aaKnown RBP8.18□□□□□ -1.1
HPS4-205ENST00000429411 FCRL3Q96P31 734 aaPredicted RBP8.18□□□□□ -1.1
HPS4-205ENST00000429411 CPNE1Q99829 537 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 NACA2Q9H009 215 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 UNC93B1Q9H1C4 597 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 MMADHCQ9H3L0 296 aaPredicted RBP8.18□□□□□ -1.1
HPS4-205ENST00000429411 ARHGEF38Q9NXL2 777 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 KCNH4Q9UQ05 1017 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 ACOT9Q9Y305 439 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 HMX2A2RU54 273 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 BIRC5O15392 142 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 RNASEH1O60930 286 aaKnown RBP8.18□□□□□ -1.1
HPS4-205ENST00000429411 OR6B1O95007 311 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 THRAP10827 490 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 TPSB2P20231 275 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 PIK3R1P27986 724 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 ALDH1A3P47895 512 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 ARHGAP1Q07960 439 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 RALGDSQ12967 914 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 PTK2BQ14289 1009 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 PDK3Q15120 406 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 TPSAB1Q15661 275 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 TBCCQ15814 346 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 DPYSL2Q16555 572 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 GRTP1Q5TC63 336 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 EGFLAMQ63HQ2 1017 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 SDE2Q6IQ49 451 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 LRRC8BQ6P9F7 803 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 SLC26A9Q7LBE3 791 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 SATL1Q86VE3 508 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 NUP93Q8N1F7 819 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 ACVR1CQ8NER5 493 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 NAT9Q9BTE0 207 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 FTHL17Q9BXU8 183 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 SLC4A5Q9BY07 1137 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 MORF4L1Q9UBU8 362 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 SRRDQ9UH36 339 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 A0A088AWK7 358 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 NRP1O14786 923 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 ADCY6O43306 1168 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 AKAP10O43572 662 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 PFDN1O60925 122 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 CLPTM1O96005 669 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 STMN1P16949 149 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 NPR3P17342 541 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 PROZP22891 400 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 NOS2P35228 1153 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 GRM5P41594 1212 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 CHRNA4P43681 627 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 STX1BP61266 288 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 FOLH1Q04609 750 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 NSUN2Q08J23 767 aaKnown RBP eCLIP8.17□□□□□ -1.1
HPS4-205ENST00000429411 SEMA5AQ13591 1074 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 KYAT1Q16773 422 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 SLC25A52Q3SY17 297 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 NOMO2Q5JPE7 1267 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 C4orf22Q6V702 233 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 GK5Q6ZS86 529 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 AMIGO2Q86SJ2 522 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 LRRC43Q8N309 656 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 AFAP1L2Q8N4X5 818 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 MAPK15Q8TD08 544 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 PDCD6IPQ8WUM4 868 aaKnown RBP8.17□□□□□ -1.1
HPS4-205ENST00000429411 HHIPL1Q96JK4 782 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 CCDC106Q9BWC9 280 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 MROH8Q9H579 483 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 FAM96AQ9H5X1 160 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 CNTN3Q9P232 1028 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 ADAMTS6Q9UKP5 1117 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 TTC24A2A3L6 582 aaPredicted RBP8.17□□□□□ -1.1
HPS4-205ENST00000429411 MYBPHLA2RUH7 354 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 PABPN1LA6NDY0 278 aaKnown RBP8.17□□□□□ -1.1
HPS4-205ENST00000429411 A6NHS1 94 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 MSI1O43347 362 aaKnown RBP8.17□□□□□ -1.1
HPS4-205ENST00000429411 ZBTB14O43829 449 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 PIRTP0C851 137 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 VCLP18206 1134 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 ADRA1BP35368 520 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 FAM110CQ1W6H9 321 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 LSM12Q3MHD2 195 aaKnown RBP8.17□□□□□ -1.1
HPS4-205ENST00000429411 TMEM259Q4ZIN3 620 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 LRRC23Q53EV4 343 aaPredicted RBP8.17□□□□□ -1.1
HPS4-205ENST00000429411 PITRM1Q5JRX3 1037 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 C6orf52Q5T4I8 152 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 SDHAF4Q5VUM1 108 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 BTBD8Q5XKL5 378 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 NAPEPLDQ6IQ20 393 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 CYP4V2Q6ZWL3 525 aaPredicted RBP8.17□□□□□ -1.1
HPS4-205ENST00000429411 ZNF534Q76KX8 674 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 MIPOL1Q8TD10 442 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 NXNL1Q96CM4 212 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 HIC2Q96JB3 615 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 SENP8Q96LD8 212 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 MRPL1Q9BYD6 325 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms