RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 NHEJ1Q9H9Q4 299 aaPredicted RBP13.88□□□□□ -0.19
SNX3-204ENST00000426155 OSGEPQ9NPF4 335 aa13.88□□□□□ -0.19
SNX3-204ENST00000426155 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.88□□□□□ -0.19
SNX3-204ENST00000426155 ZNHIT6Q9NWK9 470 aaKnown RBP13.88□□□□□ -0.19
SNX3-204ENST00000426155 CWC15Q9P013 229 aaKnown RBP13.88□□□□□ -0.19
SNX3-204ENST00000426155 CTTNBP2NLQ9P2B4 639 aa13.88□□□□□ -0.19
SNX3-204ENST00000426155 SUSD2Q9UGT4 822 aa13.88□□□□□ -0.19
SNX3-204ENST00000426155 IL36AQ9UHA7 158 aa13.88□□□□□ -0.19
SNX3-204ENST00000426155 CNOT1A5YKK6 2376 aaKnown RBP13.88□□□□□ -0.19
SNX3-204ENST00000426155 A0A1B0GVT2 93 aa13.87□□□□□ -0.19
SNX3-204ENST00000426155 MED19A0JLT2 244 aaPredicted RBP13.87□□□□□ -0.19
SNX3-204ENST00000426155 LRRC72A6NJI9 287 aa13.87□□□□□ -0.19
SNX3-204ENST00000426155 C10orf142B7Z368 130 aa13.87□□□□□ -0.19
SNX3-204ENST00000426155 AKR1B15C9JRZ8 316 aaPredicted RBP13.87□□□□□ -0.19
SNX3-204ENST00000426155 J3KR12 359 aa13.87□□□□□ -0.19
SNX3-204ENST00000426155 ARHGAP33O14559 1287 aa13.87□□□□□ -0.19
SNX3-204ENST00000426155 TM4SF5O14894 197 aa13.87□□□□□ -0.19
SNX3-204ENST00000426155 WNT9AO14904 365 aa13.87□□□□□ -0.19
SNX3-204ENST00000426155 BCAT2O15382 392 aaPredicted RBP13.87□□□□□ -0.19
SNX3-204ENST00000426155 DAPK3O43293 454 aa13.87□□□□□ -0.19
SNX3-204ENST00000426155 PLRG1O43660 514 aaKnown RBP13.87□□□□□ -0.19
SNX3-204ENST00000426155 BUB1O43683 1085 aa13.87□□□□□ -0.19
SNX3-204ENST00000426155 TMCC1O94876 653 aa13.87□□□□□ -0.19
SNX3-204ENST00000426155 GNSP15586 552 aa13.87□□□□□ -0.19
SNX3-204ENST00000426155 SDHBP21912 280 aa13.87□□□□□ -0.19
SNX3-204ENST00000426155 MAT2AP31153 395 aaKnown RBP13.87□□□□□ -0.19
SNX3-204ENST00000426155 SSR1P43307 286 aaKnown RBP13.87□□□□□ -0.19
SNX3-204ENST00000426155 RECQLP46063 649 aaPredicted RBP13.87□□□□□ -0.19
SNX3-204ENST00000426155 CSNK1EP49674 416 aaKnown RBP13.87□□□□□ -0.19
SNX3-204ENST00000426155 ZNF75DP51815 510 aa13.87□□□□□ -0.19
SNX3-204ENST00000426155 TAS2R38P59533 333 aa13.87□□□□□ -0.19
SNX3-204ENST00000426155 SERINC3Q13530 473 aa13.87□□□□□ -0.19
SNX3-204ENST00000426155 DPYSQ14117 519 aa13.87□□□□□ -0.19
SNX3-204ENST00000426155 PIGHQ14442 188 aaPredicted RBP13.87□□□□□ -0.19
SNX3-204ENST00000426155 PARP15Q460N3 678 aa13.87□□□□□ -0.19
SNX3-204ENST00000426155 CARD16Q5EG05 197 aa13.87□□□□□ -0.19
SNX3-204ENST00000426155 PIP5KL1Q5T9C9 394 aa13.87□□□□□ -0.19
SNX3-204ENST00000426155 FAM46CQ5VWP2 391 aa13.87□□□□□ -0.19
SNX3-204ENST00000426155 ARHGAP36Q6ZRI8 547 aa13.87□□□□□ -0.19
SNX3-204ENST00000426155 RABEPKQ7Z6M1 372 aa13.87□□□□□ -0.19
SNX3-204ENST00000426155 CNGA4Q8IV77 575 aa13.87□□□□□ -0.19
SNX3-204ENST00000426155 ARHGAP12Q8IWW6 846 aa13.87□□□□□ -0.19
SNX3-204ENST00000426155 RYBPQ8N488 228 aaPredicted RBP13.87□□□□□ -0.19
SNX3-204ENST00000426155 TC2NQ8N9U0 490 aa13.87□□□□□ -0.19
SNX3-204ENST00000426155 OR2T34Q8NGX1 318 aa13.87□□□□□ -0.19
SNX3-204ENST00000426155 CTNNBL1Q8WYA6 563 aaPredicted RBP13.87□□□□□ -0.19
SNX3-204ENST00000426155 SLC39A8Q9C0K1 460 aa13.87□□□□□ -0.19
SNX3-204ENST00000426155 TM9SF3Q9HD45 589 aa13.87□□□□□ -0.19
SNX3-204ENST00000426155 ETNK2Q9NVF9 386 aa13.87□□□□□ -0.19
SNX3-204ENST00000426155 KLHL11Q9NVR0 708 aa13.87□□□□□ -0.19
SNX3-204ENST00000426155 IP6K2Q9UHH9 426 aa13.87□□□□□ -0.19
SNX3-204ENST00000426155 HPCAL4Q9UM19 191 aa13.87□□□□□ -0.19
SNX3-204ENST00000426155 LRRK1Q38SD2 2015 aa13.86□□□□□ -0.19
SNX3-204ENST00000426155 NCOR2Q9Y618 2525 aa13.86□□□□□ -0.19
SNX3-204ENST00000426155 TBC1D3DA0A087WVF3 549 aa13.86□□□□□ -0.19
SNX3-204ENST00000426155 TBC1D3IA0A087WXS9 549 aa13.86□□□□□ -0.19
SNX3-204ENST00000426155 TBC1D3EA0A087X179 549 aa13.86□□□□□ -0.19
SNX3-204ENST00000426155 TBC1D3KA0A087X1G2 549 aa13.86□□□□□ -0.19
SNX3-204ENST00000426155 TBC1D3FA6NER0 549 aaPredicted RBP13.86□□□□□ -0.19
SNX3-204ENST00000426155 TMEM110-MUSTN1A8MSY1 372 aa13.86□□□□□ -0.19
SNX3-204ENST00000426155 TBC1D3LB9A6J9 549 aa13.86□□□□□ -0.19
SNX3-204ENST00000426155 CD48P09326 243 aa13.86□□□□□ -0.19
SNX3-204ENST00000426155 H2AFZP0C0S5 128 aa13.86□□□□□ -0.19
SNX3-204ENST00000426155 TBC1D3HP0C7X1 549 aa13.86□□□□□ -0.19
SNX3-204ENST00000426155 CD27P26842 260 aa13.86□□□□□ -0.19
SNX3-204ENST00000426155 PAPOLAP51003 745 aaKnown RBP13.86□□□□□ -0.19
SNX3-204ENST00000426155 ATXN3P54252 364 aaPredicted RBP13.86□□□□□ -0.19
SNX3-204ENST00000426155 YBEYP58557 167 aaPredicted RBP13.86□□□□□ -0.19
SNX3-204ENST00000426155 SLC20A2Q08357 652 aa13.86□□□□□ -0.19
SNX3-204ENST00000426155 SFSWAPQ12872 951 aaKnown RBP13.86□□□□□ -0.19
SNX3-204ENST00000426155 ACAP1Q15027 740 aa13.86□□□□□ -0.19
SNX3-204ENST00000426155 DPYSL2Q16555 572 aa13.86□□□□□ -0.19
SNX3-204ENST00000426155 TSR1Q2NL82 804 aaKnown RBP13.86□□□□□ -0.19
SNX3-204ENST00000426155 ATP13A4Q4VNC1 1196 aa13.86□□□□□ -0.19
SNX3-204ENST00000426155 TBC1D3GQ6DHY5 549 aa13.86□□□□□ -0.19
SNX3-204ENST00000426155 TBC1D3CQ6IPX1 549 aa13.86□□□□□ -0.19
SNX3-204ENST00000426155 H2AFVQ71UI9 128 aa13.86□□□□□ -0.19
SNX3-204ENST00000426155 TBC1D3Q8IZP1 549 aaPredicted RBP13.86□□□□□ -0.19
SNX3-204ENST00000426155 TMIEQ8NEW7 156 aa13.86□□□□□ -0.19
SNX3-204ENST00000426155 OR2AP1Q8NGE2 309 aa13.86□□□□□ -0.19
SNX3-204ENST00000426155 CCDC42Q96M95 316 aa13.86□□□□□ -0.19
SNX3-204ENST00000426155 HEPHQ9BQS7 1158 aa13.86□□□□□ -0.19
SNX3-204ENST00000426155 IL21RQ9HBE5 538 aa13.86□□□□□ -0.19
SNX3-204ENST00000426155 PDFQ9HBH1 243 aa13.86□□□□□ -0.19
SNX3-204ENST00000426155 PCDH18Q9HCL0 1135 aa13.86□□□□□ -0.19
SNX3-204ENST00000426155 LHX3Q9UBR4 397 aa13.86□□□□□ -0.19
SNX3-204ENST00000426155 KNL1Q8NG31 2342 aa13.86□□□□□ -0.19
SNX3-204ENST00000426155 TRPM6Q9BX84 2022 aa13.85□□□□□ -0.19
SNX3-204ENST00000426155 A0A1W2PPC4 97 aa13.85□□□□□ -0.19
SNX3-204ENST00000426155 MYO1FO00160 1098 aa13.85□□□□□ -0.19
SNX3-204ENST00000426155 DFFAO00273 331 aa13.85□□□□□ -0.19
SNX3-204ENST00000426155 KRIT1O00522 736 aa13.85□□□□□ -0.19
SNX3-204ENST00000426155 GIPC1O14908 333 aa13.85□□□□□ -0.19
SNX3-204ENST00000426155 GSRP00390 522 aa13.85□□□□□ -0.19
SNX3-204ENST00000426155 PRNPP04156 253 aa13.85□□□□□ -0.19
SNX3-204ENST00000426155 WNT1P04628 370 aa13.85□□□□□ -0.19
SNX3-204ENST00000426155 TMEM253P0C7T8 217 aa13.85□□□□□ -0.19
SNX3-204ENST00000426155 AMPD1P23109 780 aa13.85□□□□□ -0.19
SNX3-204ENST00000426155 HTR7P34969 479 aa13.85□□□□□ -0.19
SNX3-204ENST00000426155 GEMIN4P57678 1058 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms