RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 CCNHP51946 323 aaPredicted RBP24.87■■□□□ 1.57
VEGFA-209ENST00000425836 ZBTB16Q05516 673 aa24.87■■□□□ 1.57
VEGFA-209ENST00000425836 PPIDQ08752 370 aaKnown RBP24.87■■□□□ 1.57
VEGFA-209ENST00000425836 CST6Q15828 149 aa24.87■■□□□ 1.57
VEGFA-209ENST00000425836 TIGD7Q6NT04 549 aaPredicted RBP24.87■■□□□ 1.57
VEGFA-209ENST00000425836 BZW1Q7L1Q6 419 aaKnown RBP24.87■■□□□ 1.57
VEGFA-209ENST00000425836 DSG4Q86SJ6 1040 aa24.87■■□□□ 1.57
VEGFA-209ENST00000425836 NSMCE1Q8WV22 266 aa24.87■■□□□ 1.57
VEGFA-209ENST00000425836 RLN3Q8WXF3 142 aa24.87■■□□□ 1.57
VEGFA-209ENST00000425836 MAML1Q92585 1016 aa24.87■■□□□ 1.57
VEGFA-209ENST00000425836 FATE1Q969F0 183 aa24.87■■□□□ 1.57
VEGFA-209ENST00000425836 CD93Q9NPY3 652 aa24.87■■□□□ 1.57
VEGFA-209ENST00000425836 ITM2CQ9NQX7 267 aa24.87■■□□□ 1.57
VEGFA-209ENST00000425836 KCND1Q9NSA2 647 aa24.87■■□□□ 1.57
VEGFA-209ENST00000425836 SEPT3Q9UH03 358 aa24.87■■□□□ 1.57
VEGFA-209ENST00000425836 SARDHQ9UL12 918 aa24.87■■□□□ 1.57
VEGFA-209ENST00000425836 NUP205Q92621 2012 aa24.87■■□□□ 1.57
VEGFA-209ENST00000425836 CKAP5Q14008 2032 aa24.86■■□□□ 1.57
VEGFA-209ENST00000425836 WDFY4Q6ZS81 3184 aa24.86■■□□□ 1.57
VEGFA-209ENST00000425836 APOC4-APOC2K7ER74 178 aa24.86■■□□□ 1.57
VEGFA-209ENST00000425836 ENC1O14682 589 aa24.86■■□□□ 1.57
VEGFA-209ENST00000425836 IL1BP01584 269 aa24.86■■□□□ 1.57
VEGFA-209ENST00000425836 APOC2P02655 101 aa24.86■■□□□ 1.57
VEGFA-209ENST00000425836 PSMD8P48556 350 aa24.86■■□□□ 1.57
VEGFA-209ENST00000425836 HNRNPDQ14103 355 aaKnown RBP24.86■■□□□ 1.57
VEGFA-209ENST00000425836 MYLK3Q32MK0 819 aa24.86■■□□□ 1.57
VEGFA-209ENST00000425836 CCDC181Q5TID7 509 aa24.86■■□□□ 1.57
VEGFA-209ENST00000425836 CCDC13Q8IYE1 715 aa24.86■■□□□ 1.57
VEGFA-209ENST00000425836 RYBPQ8N488 228 aaPredicted RBP24.86■■□□□ 1.57
VEGFA-209ENST00000425836 TEX26Q8N6G2 289 aa24.86■■□□□ 1.57
VEGFA-209ENST00000425836 OR6K2Q8NGY2 324 aa24.86■■□□□ 1.57
VEGFA-209ENST00000425836 VOPP1Q96AW1 172 aa24.86■■□□□ 1.57
VEGFA-209ENST00000425836 EXOC2Q96KP1 924 aa24.86■■□□□ 1.57
VEGFA-209ENST00000425836 GDAP1L1Q96MZ0 367 aa24.86■■□□□ 1.57
VEGFA-209ENST00000425836 PSKH2Q96QS6 385 aa24.86■■□□□ 1.57
VEGFA-209ENST00000425836 HEPHQ9BQS7 1158 aa24.86■■□□□ 1.57
VEGFA-209ENST00000425836 CINPQ9BW66 212 aaPredicted RBP24.86■■□□□ 1.57
VEGFA-209ENST00000425836 IRF2BPLQ9H1B7 796 aa24.86■■□□□ 1.57
VEGFA-209ENST00000425836 CARD9Q9H257 536 aa24.86■■□□□ 1.57
VEGFA-209ENST00000425836 WASF2Q9Y6W5 498 aa24.86■■□□□ 1.57
VEGFA-209ENST00000425836 NYNRINQ9P2P1 1898 aaKnown RBP24.85■■□□□ 1.57
VEGFA-209ENST00000425836 RNF103O00237 685 aa24.85■■□□□ 1.57
VEGFA-209ENST00000425836 PPP1R12AO14974 1030 aaPredicted RBP24.85■■□□□ 1.57
VEGFA-209ENST00000425836 MUSKO15146 869 aa24.85■■□□□ 1.57
VEGFA-209ENST00000425836 HRO43593 1189 aa24.85■■□□□ 1.57
VEGFA-209ENST00000425836 LILRB5O75023 590 aa24.85■■□□□ 1.57
VEGFA-209ENST00000425836 IGSF6O95976 241 aa24.85■■□□□ 1.57
VEGFA-209ENST00000425836 DNTTP04053 509 aa24.85■■□□□ 1.57
VEGFA-209ENST00000425836 ACADMP11310 421 aa24.85■■□□□ 1.57
VEGFA-209ENST00000425836 SLC8A1P32418 973 aa24.85■■□□□ 1.57
VEGFA-209ENST00000425836 SRSF5Q13243 272 aaKnown RBP24.85■■□□□ 1.57
VEGFA-209ENST00000425836 MAP7D1Q3KQU3 841 aa24.85■■□□□ 1.57
VEGFA-209ENST00000425836 USP39Q53GS9 565 aaKnown RBP24.85■■□□□ 1.57
VEGFA-209ENST00000425836 MARC1Q5VT66 337 aa24.85■■□□□ 1.57
VEGFA-209ENST00000425836 B4GALNT4Q76KP1 1039 aa24.85■■□□□ 1.57
VEGFA-209ENST00000425836 TMIEQ8NEW7 156 aa24.85■■□□□ 1.57
VEGFA-209ENST00000425836 BRD8Q9H0E9 1235 aa24.85■■□□□ 1.57
VEGFA-209ENST00000425836 USP36Q9P275 1121 aaKnown RBP24.85■■□□□ 1.57
VEGFA-209ENST00000425836 IL36AQ9UHA7 158 aa24.85■■□□□ 1.57
VEGFA-209ENST00000425836 INVSQ9Y283 1065 aa24.85■■□□□ 1.57
VEGFA-209ENST00000425836 R4GN57 208 aa24.85■■□□□ 1.57
VEGFA-209ENST00000425836 MID1O15344 667 aa24.84■■□□□ 1.57
VEGFA-209ENST00000425836 ZNF217O75362 1048 aa24.84■■□□□ 1.57
VEGFA-209ENST00000425836 POP4O95707 220 aaKnown RBP24.84■■□□□ 1.57
VEGFA-209ENST00000425836 P2RY2P41231 377 aa24.84■■□□□ 1.57
VEGFA-209ENST00000425836 MMP13P45452 471 aa24.84■■□□□ 1.57
VEGFA-209ENST00000425836 RGRP47804 291 aa24.84■■□□□ 1.57
VEGFA-209ENST00000425836 TPMTP51580 245 aa24.84■■□□□ 1.57
VEGFA-209ENST00000425836 RENBPP51606 427 aa24.84■■□□□ 1.57
VEGFA-209ENST00000425836 ZNF33AQ06730 810 aa24.84■■□□□ 1.57
VEGFA-209ENST00000425836 AP1B1Q10567 949 aa24.84■■□□□ 1.57
VEGFA-209ENST00000425836 KLF1Q13351 362 aaPredicted RBP24.84■■□□□ 1.57
VEGFA-209ENST00000425836 ARSIQ5FYB1 569 aa24.84■■□□□ 1.57
VEGFA-209ENST00000425836 SEL1L2Q5TEA6 688 aa24.84■■□□□ 1.57
VEGFA-209ENST00000425836 C17orf53Q8N3J3 647 aaPredicted RBP24.84■■□□□ 1.57
VEGFA-209ENST00000425836 PGBD5Q8N414 524 aa24.84■■□□□ 1.57
VEGFA-209ENST00000425836 FRMD1Q8N878 549 aa24.84■■□□□ 1.57
VEGFA-209ENST00000425836 PIP4K2CQ8TBX8 421 aa24.84■■□□□ 1.57
VEGFA-209ENST00000425836 ZNF419Q96HQ0 510 aaPredicted RBP24.84■■□□□ 1.57
VEGFA-209ENST00000425836 PABPC3Q9H361 631 aaKnown RBP24.84■■□□□ 1.57
VEGFA-209ENST00000425836 EVLQ9UI08 416 aaPredicted RBP24.84■■□□□ 1.57
VEGFA-209ENST00000425836 LEFTY1O75610 366 aa24.84■■□□□ 1.57
VEGFA-209ENST00000425836 ADH1BP00325 375 aa24.84■■□□□ 1.57
VEGFA-209ENST00000425836 PRNPP04156 253 aa24.84■■□□□ 1.57
VEGFA-209ENST00000425836 CCNB1P14635 433 aa24.84■■□□□ 1.57
VEGFA-209ENST00000425836 GKP32189 559 aa24.84■■□□□ 1.57
VEGFA-209ENST00000425836 METAP1P53582 386 aa24.84■■□□□ 1.57
VEGFA-209ENST00000425836 NSUN2Q08J23 767 aaKnown RBP eCLIP24.84■■□□□ 1.57
VEGFA-209ENST00000425836 ZNF235Q14590 738 aa24.84■■□□□ 1.57
VEGFA-209ENST00000425836 FAM46CQ5VWP2 391 aa24.84■■□□□ 1.57
VEGFA-209ENST00000425836 ACTL9Q8TC94 416 aa24.84■■□□□ 1.57
VEGFA-209ENST00000425836 GRIN3AQ8TCU5 1115 aa24.84■■□□□ 1.57
VEGFA-209ENST00000425836 GAB3Q8WWW8 586 aa24.84■■□□□ 1.57
VEGFA-209ENST00000425836 ATOH1Q92858 354 aaPredicted RBP24.84■■□□□ 1.57
VEGFA-209ENST00000425836 ZDHHC6Q9H6R6 413 aa24.84■■□□□ 1.57
VEGFA-209ENST00000425836 RAPGEFL1Q9UHV5 662 aa24.84■■□□□ 1.57
VEGFA-209ENST00000425836 SCML1Q9UN30 329 aa24.84■■□□□ 1.57
VEGFA-209ENST00000425836 CYP8B1Q9UNU6 501 aa24.84■■□□□ 1.57
VEGFA-209ENST00000425836 TCRBV7S2A1N4TA0A589 114 aa24.83■■□□□ 1.57
VEGFA-209ENST00000425836 C1QTNF3-AMACRE9PGA6 284 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms