RNA–Protein interactions for RNA: ENST00000425695.5

HTATSF1-202, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 3

Gene HTATSF1, Length 885 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-202ENST00000425695 TBC1D3KA0A087X1G2 549 aa25.45■■□□□ 1.66
HTATSF1-202ENST00000425695 TBC1D3FA6NER0 549 aaPredicted RBP25.45■■□□□ 1.66
HTATSF1-202ENST00000425695 TBC1D3LB9A6J9 549 aa25.45■■□□□ 1.66
HTATSF1-202ENST00000425695 J3KR12 359 aa25.45■■□□□ 1.66
HTATSF1-202ENST00000425695 DFFAO00273 331 aa25.45■■□□□ 1.66
HTATSF1-202ENST00000425695 LEFTY1O75610 366 aa25.45■■□□□ 1.66
HTATSF1-202ENST00000425695 TMCC1O94876 653 aa25.45■■□□□ 1.66
HTATSF1-202ENST00000425695 SERPINF2P08697 491 aa25.45■■□□□ 1.66
HTATSF1-202ENST00000425695 TBC1D3HP0C7X1 549 aa25.45■■□□□ 1.66
HTATSF1-202ENST00000425695 GKP32189 559 aa25.45■■□□□ 1.66
HTATSF1-202ENST00000425695 MAPK8P45983 427 aa25.45■■□□□ 1.66
HTATSF1-202ENST00000425695 ZNF135P52742 658 aaPredicted RBP25.45■■□□□ 1.66
HTATSF1-202ENST00000425695 ADPRHP54922 357 aa25.45■■□□□ 1.66
HTATSF1-202ENST00000425695 TAS2R40P59535 323 aa25.45■■□□□ 1.66
HTATSF1-202ENST00000425695 ATXN7L2Q5T6C5 722 aaPredicted RBP25.45■■□□□ 1.66
HTATSF1-202ENST00000425695 TBC1D3GQ6DHY5 549 aa25.45■■□□□ 1.66
HTATSF1-202ENST00000425695 TBC1D3CQ6IPX1 549 aa25.45■■□□□ 1.66
HTATSF1-202ENST00000425695 RABEPKQ7Z6M1 372 aa25.45■■□□□ 1.66
HTATSF1-202ENST00000425695 TBC1D3Q8IZP1 549 aaPredicted RBP25.45■■□□□ 1.66
HTATSF1-202ENST00000425695 OR2T34Q8NGX1 318 aa25.45■■□□□ 1.66
HTATSF1-202ENST00000425695 ISG20Q96AZ6 181 aaKnown RBP25.45■■□□□ 1.66
HTATSF1-202ENST00000425695 ARRDC3Q96B67 414 aa25.45■■□□□ 1.66
HTATSF1-202ENST00000425695 ZDHHC6Q9H6R6 413 aa25.45■■□□□ 1.66
HTATSF1-202ENST00000425695 DLL3Q9NYJ7 618 aa25.45■■□□□ 1.66
HTATSF1-202ENST00000425695 SUSD2Q9UGT4 822 aa25.45■■□□□ 1.66
HTATSF1-202ENST00000425695 SLCO1B1Q9Y6L6 691 aa25.45■■□□□ 1.66
HTATSF1-202ENST00000425695 WASF2Q9Y6W5 498 aa25.45■■□□□ 1.66
HTATSF1-202ENST00000425695 CXorf51AA0A1B0GTR3 108 aa25.44■■□□□ 1.66
HTATSF1-202ENST00000425695 ARHGAP42A6NI28 874 aa25.44■■□□□ 1.66
HTATSF1-202ENST00000425695 C4orf47A7E2U8 309 aa25.44■■□□□ 1.66
HTATSF1-202ENST00000425695 IGHV4-34P06331 123 aa25.44■■□□□ 1.66
HTATSF1-202ENST00000425695 ENGP17813 658 aa25.44■■□□□ 1.66
HTATSF1-202ENST00000425695 SDHBP21912 280 aa25.44■■□□□ 1.66
HTATSF1-202ENST00000425695 MAGEA1P43355 309 aa25.44■■□□□ 1.66
HTATSF1-202ENST00000425695 CDH6P55285 790 aa25.44■■□□□ 1.66
HTATSF1-202ENST00000425695 PUM1Q14671 1186 aaKnown RBP eCLIP25.44■■□□□ 1.662e-6■□□□□ 10.4
HTATSF1-202ENST00000425695 ARHGAP12Q8IWW6 846 aa25.44■■□□□ 1.66
HTATSF1-202ENST00000425695 TP53INP2Q8IXH6 220 aa25.44■■□□□ 1.66
HTATSF1-202ENST00000425695 NPWQ8N729 165 aa25.44■■□□□ 1.66
HTATSF1-202ENST00000425695 CSPG4P5Q96PW8 444 aa25.44■■□□□ 1.66
HTATSF1-202ENST00000425695 GTPBP2Q9BX10 602 aaKnown RBP25.44■■□□□ 1.66
HTATSF1-202ENST00000425695 CAPN10Q9HC96 672 aa25.44■■□□□ 1.66
HTATSF1-202ENST00000425695 DYRK4Q9NR20 520 aa25.44■■□□□ 1.66
HTATSF1-202ENST00000425695 ETNK2Q9NVF9 386 aa25.44■■□□□ 1.66
HTATSF1-202ENST00000425695 A0A1B0GTW7 788 aa25.43■■□□□ 1.66
HTATSF1-202ENST00000425695 SLC30A4O14863 429 aa25.43■■□□□ 1.66
HTATSF1-202ENST00000425695 BCAT2O15382 392 aaPredicted RBP25.43■■□□□ 1.66
HTATSF1-202ENST00000425695 CD48P09326 243 aa25.43■■□□□ 1.66
HTATSF1-202ENST00000425695 SNRPD1P62314 119 aaKnown RBP25.43■■□□□ 1.66
HTATSF1-202ENST00000425695 MMRN1Q13201 1228 aa25.43■■□□□ 1.66
HTATSF1-202ENST00000425695 AGBL4Q5VU57 503 aa25.43■■□□□ 1.66
HTATSF1-202ENST00000425695 KLHL11Q9NVR0 708 aa25.43■■□□□ 1.66
HTATSF1-202ENST00000425695 UBA2Q9UBT2 640 aaPredicted RBP25.43■■□□□ 1.66
HTATSF1-202ENST00000425695 DCDC2BA2VCK2 349 aa25.42■■□□□ 1.66
HTATSF1-202ENST00000425695 KRIT1O00522 736 aa25.42■■□□□ 1.66
HTATSF1-202ENST00000425695 GSRP00390 522 aa25.42■■□□□ 1.66
HTATSF1-202ENST00000425695 CD27P26842 260 aa25.42■■□□□ 1.66
HTATSF1-202ENST00000425695 RHOAP61586 193 aa25.42■■□□□ 1.66
HTATSF1-202ENST00000425695 CYTH1Q15438 398 aa25.42■■□□□ 1.66
HTATSF1-202ENST00000425695 MYLK3Q32MK0 819 aa25.42■■□□□ 1.66
HTATSF1-202ENST00000425695 INO80DQ53TQ3 878 aaPredicted RBP25.42■■□□□ 1.66
HTATSF1-202ENST00000425695 ZFYVE27Q5T4F4 411 aa25.42■■□□□ 1.66
HTATSF1-202ENST00000425695 AFMIDQ63HM1 303 aa25.42■■□□□ 1.66
HTATSF1-202ENST00000425695 ARHGAP36Q6ZRI8 547 aa25.42■■□□□ 1.66
HTATSF1-202ENST00000425695 OR2AP1Q8NGE2 309 aa25.42■■□□□ 1.66
HTATSF1-202ENST00000425695 C1orf216Q8TAB5 229 aa25.42■■□□□ 1.66
HTATSF1-202ENST00000425695 PANX2Q96RD6 677 aa25.42■■□□□ 1.66
HTATSF1-202ENST00000425695 ANP32EQ9BTT0 268 aa25.42■■□□□ 1.66
HTATSF1-202ENST00000425695 TMEM9BQ9NQ34 198 aa25.42■■□□□ 1.66
HTATSF1-202ENST00000425695 LCMT1Q9UIC8 334 aa25.42■■□□□ 1.66
HTATSF1-202ENST00000425695 CDX4O14627 284 aaPredicted RBP25.41■■□□□ 1.66
HTATSF1-202ENST00000425695 SLC7A4O43246 635 aa25.41■■□□□ 1.66
HTATSF1-202ENST00000425695 PRAMEF11O60813 436 aa25.41■■□□□ 1.66
HTATSF1-202ENST00000425695 LIMK1P53667 647 aa25.41■■□□□ 1.66
HTATSF1-202ENST00000425695 ATXN3P54252 364 aaPredicted RBP25.41■■□□□ 1.66
HTATSF1-202ENST00000425695 UAP1L1Q3KQV9 507 aa25.41■■□□□ 1.66
HTATSF1-202ENST00000425695 PIP5KL1Q5T9C9 394 aa25.41■■□□□ 1.66
HTATSF1-202ENST00000425695 TMCO3Q6UWJ1 677 aa25.41■■□□□ 1.66
HTATSF1-202ENST00000425695 RHOT2Q8IXI1 618 aa25.41■■□□□ 1.66
HTATSF1-202ENST00000425695 PLPP6Q8IY26 295 aa25.41■■□□□ 1.66
HTATSF1-202ENST00000425695 LZTR1Q8N653 840 aa25.41■■□□□ 1.66
HTATSF1-202ENST00000425695 KCTD6Q8NC69 237 aa25.41■■□□□ 1.66
HTATSF1-202ENST00000425695 OR2I1PQ8NGU4 316 aa25.41■■□□□ 1.66
HTATSF1-202ENST00000425695 CASKIN2Q8WXE0 1202 aa25.41■■□□□ 1.66
HTATSF1-202ENST00000425695 RFFLQ8WZ73 363 aa25.41■■□□□ 1.66
HTATSF1-202ENST00000425695 FAM131CQ96AQ9 280 aa25.41■■□□□ 1.66
HTATSF1-202ENST00000425695 RTKNQ9BST9 563 aa25.41■■□□□ 1.66
HTATSF1-202ENST00000425695 CALN1Q9BXU9 219 aa25.41■■□□□ 1.66
HTATSF1-202ENST00000425695 INTUQ9ULD6 942 aa25.41■■□□□ 1.66
HTATSF1-202ENST00000425695 TFR2Q9UP52 801 aa25.41■■□□□ 1.66
HTATSF1-202ENST00000425695 ARHGAP33O14559 1287 aa25.4■■□□□ 1.66
HTATSF1-202ENST00000425695 PLRG1O43660 514 aaKnown RBP25.4■■□□□ 1.66
HTATSF1-202ENST00000425695 POP4O95707 220 aaKnown RBP25.4■■□□□ 1.66
HTATSF1-202ENST00000425695 IL4RP24394 825 aa25.4■■□□□ 1.66
HTATSF1-202ENST00000425695 MAT2AP31153 395 aaKnown RBP25.4■■□□□ 1.66
HTATSF1-202ENST00000425695 MAN1A1P33908 653 aa25.4■■□□□ 1.66
HTATSF1-202ENST00000425695 CSNK1EP49674 416 aaKnown RBP25.4■■□□□ 1.66
HTATSF1-202ENST00000425695 TAS2R38P59533 333 aa25.4■■□□□ 1.66
HTATSF1-202ENST00000425695 PPP2CBP62714 309 aa25.4■■□□□ 1.66
HTATSF1-202ENST00000425695 PPP2CAP67775 309 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms