RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 MED22Q15528 200 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 TWISTNBQ3B726 338 aaPredicted RBP3.84□□□□□ -1.79
SF3B1-205ENST00000424674 ANKRD20A4Q4UJ75 823 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 ANKRD20A8PQ5CZ79 823 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 ZRANB3Q5FWF4 1079 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 ANKRD20A2Q5SQ80 823 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 ANKRD20A1Q5TYW2 823 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 ANKRD20A3Q5VUR7 823 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 HEPHL1Q6MZM0 1159 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 ARHGAP11AQ6P4F7 1023 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 SUSD1Q6UWL2 747 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 CHST9Q7L1S5 443 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 TAF8Q7Z7C8 310 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 HOOK3Q86VS8 718 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 RHPN2Q8IUC4 686 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 TICAM1Q8IUC6 712 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 SPATA2LQ8IUW3 424 aaPredicted RBP3.84□□□□□ -1.79
SF3B1-205ENST00000424674 LINC00346Q8IVM7 164 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 MPP5Q8N3R9 675 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 ZNF366Q8N895 744 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 OR56A3Q8NH54 315 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 CCHCR1Q8TD31 782 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 SLC13A3Q8WWT9 602 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 PRCCQ92733 491 aaPredicted RBP3.84□□□□□ -1.79
SF3B1-205ENST00000424674 LRRC59Q96AG4 307 aaKnown RBP3.84□□□□□ -1.79
SF3B1-205ENST00000424674 NAF1Q96HR8 494 aaKnown RBP3.84□□□□□ -1.79
SF3B1-205ENST00000424674 PGAM5Q96HS1 289 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 HIST1H2AHQ96KK5 128 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 CMTM3Q96MX0 182 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 GAL3ST4Q96RP7 486 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 AGAP2Q99490 1192 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 PKP4Q99569 1192 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 HIST1H2AJQ99878 128 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 FERMT1Q9BQL6 677 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 SOX7Q9BT81 388 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 TUBB2BQ9BVA1 445 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 PHF7Q9BWX1 381 aaPredicted RBP3.84□□□□□ -1.79
SF3B1-205ENST00000424674 KRTAP9-8Q9BYQ0 159 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 PITHD1Q9GZP4 211 aaPredicted RBP3.84□□□□□ -1.79
SF3B1-205ENST00000424674 YY1AP1Q9H869 796 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 TTC12Q9H892 705 aaPredicted RBP3.84□□□□□ -1.79
SF3B1-205ENST00000424674 UNKLQ9H9P5 680 aaKnown RBP3.84□□□□□ -1.79
SF3B1-205ENST00000424674 FANCEQ9HB96 536 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 ZBTB26Q9HCK0 441 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 ZSCAN32Q9NX65 697 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 ZDHHC7Q9NXF8 308 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 HCN3Q9P1Z3 774 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 SLC25A10Q9UBX3 287 aaPredicted RBP3.84□□□□□ -1.79
SF3B1-205ENST00000424674 TEKT2Q9UIF3 430 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 SLCO3A1Q9UIG8 710 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 OSGIN1Q9UJX0 560 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 ANAPC2Q9UJX6 822 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 KCND3Q9UK17 655 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 MTUS1Q9ULD2 1270 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 CAPN11Q9UMQ6 739 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 NSD2O96028 1365 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 A0A0A6YYJ9 748 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 TCRBV21S2A2A0A5A6 115 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 OR2W5A6NFC9 320 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 FAM90A20PA6NIJ5 464 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 SLC9B1P1A6NJY1 282 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 OR6C76A6NM76 312 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 C16orf96A6NNT2 1141 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 KCNJ18B7U540 433 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 H0YIV9 168 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 KIF2AO00139 706 aaPredicted RBP3.83□□□□□ -1.8
SF3B1-205ENST00000424674 MYO1CO00159 1063 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 CTDSP2O14595 271 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 SPOPO43791 374 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 GMFGO60234 142 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 OPHN1O60890 802 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 PSMD10O75832 226 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 PAHP00439 452 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 VIPP01282 170 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 JUNP05412 331 aaKnown RBP3.83□□□□□ -1.8
SF3B1-205ENST00000424674 GNAI3P08754 354 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 TPM1P09493 284 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 PRR35P0CG20 571 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 GHRP10912 638 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 RARGP13631 454 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 TCEA1P23193 301 aaKnown RBP3.83□□□□□ -1.8
SF3B1-205ENST00000424674 SFPQP23246 707 aaKnown RBP eCLIP3.83□□□□□ -1.8
SF3B1-205ENST00000424674 PRKCHP24723 683 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 PTPN3P26045 913 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 KLRK1P26718 216 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 MST1P26927 711 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 ECHS1P30084 290 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 RFC4P35249 363 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 USP8P40818 1118 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 MAGEA4P43358 317 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 CCR10P46092 362 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 RABIFP47224 123 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 DIO1P49895 249 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 STAT2P52630 851 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 CAPZA1P52907 286 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 WNT3P56703 355 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 WNT3AP56704 352 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 HAND2P61296 217 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 GNAI1P63096 354 aa3.83□□□□□ -1.8
SF3B1-205ENST00000424674 PRKCEQ02156 737 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms