RNA–Protein interactions for RNA: ENST00000422109.6

CTCFL-203, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-203ENST00000422109 SMARCD1Q96GM5 515 aa13.96□□□□□ -0.17
CTCFL-203ENST00000422109 DLX3O60479 287 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 SLC1A2P43004 574 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 LHX1P48742 406 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 NPY2RP49146 381 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 CDK7P50613 346 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 THOP1P52888 689 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 LBRQ14739 615 aaKnown RBP13.95□□□□□ -0.18
CTCFL-203ENST00000422109 FSCN1Q16658 493 aaKnown RBP13.95□□□□□ -0.18
CTCFL-203ENST00000422109 MMEL1Q495T6 779 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 XKR4Q5GH76 650 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 SH2D4BQ5SQS7 431 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 RBM20Q5T481 1227 aaKnown RBP13.95□□□□□ -0.18
CTCFL-203ENST00000422109 LAYNQ6UX15 382 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 BNIPLQ7Z465 357 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 CENPLQ8N0S6 344 aaPredicted RBP13.95□□□□□ -0.18
CTCFL-203ENST00000422109 PCDH20Q8N6Y1 951 aaKnown RBP13.95□□□□□ -0.18
CTCFL-203ENST00000422109 TTC16Q8NEE8 873 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 ZNF483Q8TF39 744 aaPredicted RBP13.95□□□□□ -0.18
CTCFL-203ENST00000422109 KLHL5Q96PQ7 755 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 PARK7Q99497 189 aaKnown RBP13.95□□□□□ -0.18
CTCFL-203ENST00000422109 SIKE1Q9BRV8 207 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 ADAM28Q9UKQ2 775 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 ACOT9Q9Y305 439 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 CCDC189A1A4V9 331 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 HHLA1C9JL84 531 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 PAGE1O75459 146 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 ZNF865P0CJ78 1059 aaPredicted RBP13.95□□□□□ -0.18
CTCFL-203ENST00000422109 XRCC1P18887 633 aaPredicted RBP13.95□□□□□ -0.18
CTCFL-203ENST00000422109 LRPAP1P30533 357 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 GRIK1P39086 918 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 SLC12A2P55011 1212 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 TAS2R39P59534 338 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 ADAM17P78536 824 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 CDK18Q07002 472 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 LRRC8EQ6NSJ5 796 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 CNSTQ6PJW8 725 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 CLEC14AQ86T13 490 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 DSELQ8IZU8 1212 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 GALNT4Q8N4A0 578 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 NTAN1Q96AB6 310 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 KLHL4Q9C0H6 718 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 AGO3Q9H9G7 860 aaKnown RBP13.95□□□□□ -0.18
CTCFL-203ENST00000422109 SF3B1O75533 1304 aaKnown RBP eCLIP13.95□□□□□ -0.18
CTCFL-203ENST00000422109 HDAC3O15379 428 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 GRID2O43424 1007 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 CCNT2O60583 730 aaKnown RBP13.95□□□□□ -0.18
CTCFL-203ENST00000422109 HLA-DQB2P05538 268 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 GRIK3Q13003 919 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 MSLNQ13421 630 aaPredicted RBP13.95□□□□□ -0.18
CTCFL-203ENST00000422109 LIPMQ5VYY2 423 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 BTBD8Q5XKL5 378 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 AGMOQ6ZNB7 445 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 ACAD11Q709F0 780 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 BHLHA9Q7RTU4 235 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 LIMS2Q7Z4I7 341 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 RYBPQ8N488 228 aaPredicted RBP13.95□□□□□ -0.18
CTCFL-203ENST00000422109 COPS7BQ9H9Q2 264 aaPredicted RBP13.95□□□□□ -0.18
CTCFL-203ENST00000422109 GPAMQ9HCL2 828 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 PAPOLBQ9NRJ5 636 aaKnown RBP13.95□□□□□ -0.18
CTCFL-203ENST00000422109 TRHDEQ9UKU6 1024 aa13.95□□□□□ -0.18
CTCFL-203ENST00000422109 MYOCOSA0A1B0GUC4 107 aa13.94□□□□□ -0.18
CTCFL-203ENST00000422109 NCAM2O15394 837 aa13.94□□□□□ -0.18
CTCFL-203ENST00000422109 CELF2O95319 508 aaKnown RBP13.94□□□□□ -0.18
CTCFL-203ENST00000422109 SLC4A1P02730 911 aa13.94□□□□□ -0.18
CTCFL-203ENST00000422109 STMN1P16949 149 aa13.94□□□□□ -0.18
CTCFL-203ENST00000422109 CRABP2P29373 138 aa13.94□□□□□ -0.18
CTCFL-203ENST00000422109 CD52P31358 61 aa13.94□□□□□ -0.18
CTCFL-203ENST00000422109 ETFBP38117 255 aa13.94□□□□□ -0.18
CTCFL-203ENST00000422109 CPT1AP50416 773 aa13.94□□□□□ -0.18
CTCFL-203ENST00000422109 MED21Q13503 144 aa13.94□□□□□ -0.18
CTCFL-203ENST00000422109 ART3Q13508 389 aa13.94□□□□□ -0.18
CTCFL-203ENST00000422109 CYLC2Q14093 348 aaPredicted RBP13.94□□□□□ -0.18
CTCFL-203ENST00000422109 FAM110CQ1W6H9 321 aa13.94□□□□□ -0.18
CTCFL-203ENST00000422109 PGM2L1Q6PCE3 622 aa13.94□□□□□ -0.18
CTCFL-203ENST00000422109 GK5Q6ZS86 529 aa13.94□□□□□ -0.18
CTCFL-203ENST00000422109 C14orf80Q86SX3 495 aa13.94□□□□□ -0.18
CTCFL-203ENST00000422109 OR10T2Q8NGX3 314 aa13.94□□□□□ -0.18
CTCFL-203ENST00000422109 GTF3C2Q8WUA4 911 aaPredicted RBP13.94□□□□□ -0.18
CTCFL-203ENST00000422109 CASP10Q92851 521 aa13.94□□□□□ -0.18
CTCFL-203ENST00000422109 PABPC5Q96DU9 382 aaKnown RBP13.94□□□□□ -0.18
CTCFL-203ENST00000422109 FCRL2Q96LA5 508 aaPredicted RBP13.94□□□□□ -0.18
CTCFL-203ENST00000422109 SLC9A7Q96T83 725 aa13.94□□□□□ -0.18
CTCFL-203ENST00000422109 RTP3Q9BQQ7 232 aa13.94□□□□□ -0.18
CTCFL-203ENST00000422109 RHOJQ9H4E5 214 aa13.94□□□□□ -0.18
CTCFL-203ENST00000422109 POMKQ9H5K3 350 aa13.94□□□□□ -0.18
CTCFL-203ENST00000422109 STN1Q9H668 368 aaKnown RBP13.94□□□□□ -0.18
CTCFL-203ENST00000422109 SPATS2LQ9NUQ6 558 aaKnown RBP13.94□□□□□ -0.18
CTCFL-203ENST00000422109 ADA2Q9NZK5 511 aa13.94□□□□□ -0.18
CTCFL-203ENST00000422109 CDYLQ9Y232 598 aa13.94□□□□□ -0.18
CTCFL-203ENST00000422109 RAP2CQ9Y3L5 183 aa13.94□□□□□ -0.18
CTCFL-203ENST00000422109 ATP6AP2A0A1C7CYW4 349 aa13.94□□□□□ -0.18
CTCFL-203ENST00000422109 MATN2O00339 956 aa13.94□□□□□ -0.18
CTCFL-203ENST00000422109 ATP6AP2O75787 350 aa13.94□□□□□ -0.18
CTCFL-203ENST00000422109 DDHD2O94830 711 aa13.94□□□□□ -0.18
CTCFL-203ENST00000422109 HMBSP08397 361 aa13.94□□□□□ -0.18
CTCFL-203ENST00000422109 MAGEA12P43365 314 aa13.94□□□□□ -0.18
CTCFL-203ENST00000422109 NME5P56597 212 aa13.94□□□□□ -0.18
CTCFL-203ENST00000422109 MAP2K5Q13163 448 aa13.94□□□□□ -0.18
CTCFL-203ENST00000422109 SLC12A1Q13621 1099 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms