RNA–Protein interactions for RNA: ENST00000421124.6

DDR1-233, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5

Gene DDR1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-233	ENST00000421124	CTSL	P07711	333 aa		18.9	■□□□□ 0.62
DDR1-233	ENST00000421124	ZFX	P17010	805 aa	Predicted RBP	18.9	■□□□□ 0.62
DDR1-233	ENST00000421124	CDKN2B	P42772	138 aa		18.9	■□□□□ 0.62
DDR1-233	ENST00000421124	CCNH	P51946	323 aa	Predicted RBP	18.9	■□□□□ 0.62
DDR1-233	ENST00000421124	RPL6	Q02878	288 aa	Known RBP	18.9	■□□□□ 0.62
DDR1-233	ENST00000421124	GALNT2	Q10471	571 aa		18.9	■□□□□ 0.62
DDR1-233	ENST00000421124	RFTN1	Q14699	578 aa	Predicted RBP	18.9	■□□□□ 0.62
DDR1-233	ENST00000421124	CYTH1	Q15438	398 aa		18.9	■□□□□ 0.62
DDR1-233	ENST00000421124	TAZ	Q16635	292 aa		18.9	■□□□□ 0.62
DDR1-233	ENST00000421124	PMS2CL	Q68D20	193 aa		18.9	■□□□□ 0.62
DDR1-233	ENST00000421124	SLC9A4	Q6AI14	798 aa		18.9	■□□□□ 0.62
DDR1-233	ENST00000421124	SPOCD1	Q6ZMY3	1216 aa		18.9	■□□□□ 0.62
DDR1-233	ENST00000421124	ZNF662	Q6ZS27	426 aa		18.9	■□□□□ 0.62
DDR1-233	ENST00000421124	LPCAT2	Q7L5N7	544 aa		18.9	■□□□□ 0.62
DDR1-233	ENST00000421124	PEX26	Q7Z412	305 aa		18.9	■□□□□ 0.62
DDR1-233	ENST00000421124	NT5DC3	Q86UY8	548 aa		18.9	■□□□□ 0.62
DDR1-233	ENST00000421124	FAM124A	Q86V42	546 aa		18.9	■□□□□ 0.62
DDR1-233	ENST00000421124	RFX6	Q8HWS3	928 aa		18.9	■□□□□ 0.62
DDR1-233	ENST00000421124	RCOR2	Q8IZ40	523 aa		18.9	■□□□□ 0.62
DDR1-233	ENST00000421124	TMIE	Q8NEW7	156 aa		18.9	■□□□□ 0.62
DDR1-233	ENST00000421124	EXD1	Q8NHP7	514 aa		18.9	■□□□□ 0.62
DDR1-233	ENST00000421124	GANC	Q8TET4	914 aa		18.9	■□□□□ 0.62
DDR1-233	ENST00000421124	TOE1	Q96GM8	510 aa	Known RBP	18.9	■□□□□ 0.62
DDR1-233	ENST00000421124	ZNF599	Q96NL3	588 aa		18.9	■□□□□ 0.62
DDR1-233	ENST00000421124	HEPH	Q9BQS7	1158 aa		18.9	■□□□□ 0.62
DDR1-233	ENST00000421124	FBXL12	Q9NXK8	326 aa		18.9	■□□□□ 0.62
DDR1-233	ENST00000421124	WSB2	Q9NYS7	404 aa	Predicted RBP	18.9	■□□□□ 0.62
DDR1-233	ENST00000421124	HECA	Q9UBI9	543 aa	Predicted RBP	18.9	■□□□□ 0.62
DDR1-233	ENST00000421124	SARDH	Q9UL12	918 aa		18.9	■□□□□ 0.62
DDR1-233	ENST00000421124	CAPN6	Q9Y6Q1	641 aa		18.9	■□□□□ 0.62
DDR1-233	ENST00000421124	SDK1	Q7Z5N4	2213 aa		18.89	■□□□□ 0.61
DDR1-233	ENST00000421124	MAFK	O60675	156 aa		18.89	■□□□□ 0.61
DDR1-233	ENST00000421124	IGSF6	O95976	241 aa		18.89	■□□□□ 0.61
DDR1-233	ENST00000421124	GBE1	Q04446	702 aa		18.89	■□□□□ 0.61
DDR1-233	ENST00000421124	TMCO4	Q5TGY1	634 aa		18.89	■□□□□ 0.61
DDR1-233	ENST00000421124	ASCL5	Q7RTU5	278 aa		18.89	■□□□□ 0.61
DDR1-233	ENST00000421124	CCDC50	Q8IVM0	306 aa		18.89	■□□□□ 0.61
DDR1-233	ENST00000421124	RYBP	Q8N488	228 aa	Predicted RBP	18.89	■□□□□ 0.61
DDR1-233	ENST00000421124	HDDC3	Q8N4P3	179 aa		18.89	■□□□□ 0.61
DDR1-233	ENST00000421124	AADAT	Q8N5Z0	425 aa		18.89	■□□□□ 0.61
DDR1-233	ENST00000421124	PLD5	Q8N7P1	536 aa		18.89	■□□□□ 0.61
DDR1-233	ENST00000421124	GRIN3A	Q8TCU5	1115 aa		18.89	■□□□□ 0.61
DDR1-233	ENST00000421124	GDAP1L1	Q96MZ0	367 aa		18.89	■□□□□ 0.61
DDR1-233	ENST00000421124	OMD	Q99983	421 aa		18.89	■□□□□ 0.61
DDR1-233	ENST00000421124	ZDHHC6	Q9H6R6	413 aa		18.89	■□□□□ 0.61
DDR1-233	ENST00000421124	LHX3	Q9UBR4	397 aa		18.89	■□□□□ 0.61
DDR1-233	ENST00000421124	SERGEF	Q9UGK8	458 aa		18.89	■□□□□ 0.61
DDR1-233	ENST00000421124	PPP2R2C	Q9Y2T4	447 aa		18.89	■□□□□ 0.61
DDR1-233	ENST00000421124	WASF2	Q9Y6W5	498 aa		18.89	■□□□□ 0.61
DDR1-233	ENST00000421124	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		18.88	■□□□□ 0.61
DDR1-233	ENST00000421124		A0A1W2PP55	124 aa		18.88	■□□□□ 0.61
DDR1-233	ENST00000421124	KPNA3	O00505	521 aa	Predicted RBP	18.88	■□□□□ 0.61
DDR1-233	ENST00000421124	LEFTY1	O75610	366 aa		18.88	■□□□□ 0.61
DDR1-233	ENST00000421124	RNASEH2A	O75792	299 aa	Known RBP	18.88	■□□□□ 0.61
DDR1-233	ENST00000421124	MAP3K6	O95382	1288 aa		18.88	■□□□□ 0.61
DDR1-233	ENST00000421124	POP4	O95707	220 aa	Known RBP	18.88	■□□□□ 0.61
DDR1-233	ENST00000421124	FTCD	O95954	541 aa		18.88	■□□□□ 0.61
DDR1-233	ENST00000421124	MX2	P20592	715 aa		18.88	■□□□□ 0.61
DDR1-233	ENST00000421124	GARS	P41250	739 aa	Known RBP	18.88	■□□□□ 0.61
DDR1-233	ENST00000421124	RWDD2B	P57060	319 aa		18.88	■□□□□ 0.61
DDR1-233	ENST00000421124	TFDP2	Q14188	446 aa		18.88	■□□□□ 0.61
DDR1-233	ENST00000421124	ARSI	Q5FYB1	569 aa		18.88	■□□□□ 0.61
DDR1-233	ENST00000421124	TFDP3	Q5H9I0	405 aa		18.88	■□□□□ 0.61
DDR1-233	ENST00000421124	SPDYC	Q5MJ68	293 aa		18.88	■□□□□ 0.61
DDR1-233	ENST00000421124	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	18.88	■□□□□ 0.61
DDR1-233	ENST00000421124	ALYREF	Q86V81	257 aa	Known RBP	18.88	■□□□□ 0.61
DDR1-233	ENST00000421124	TMEFF1	Q8IYR6	380 aa		18.88	■□□□□ 0.61
DDR1-233	ENST00000421124	NSMCE1	Q8WV22	266 aa		18.88	■□□□□ 0.61
DDR1-233	ENST00000421124	LOXL4	Q96JB6	756 aa		18.88	■□□□□ 0.61
DDR1-233	ENST00000421124	ZNF830	Q96NB3	372 aa	Predicted RBP	18.88	■□□□□ 0.61
DDR1-233	ENST00000421124	CINP	Q9BW66	212 aa	Predicted RBP	18.88	■□□□□ 0.61
DDR1-233	ENST00000421124	BTBD1	Q9H0C5	482 aa		18.88	■□□□□ 0.61
DDR1-233	ENST00000421124	SGK2	Q9HBY8	427 aa		18.88	■□□□□ 0.61
DDR1-233	ENST00000421124	LZTFL1	Q9NQ48	299 aa		18.88	■□□□□ 0.61
DDR1-233	ENST00000421124	DTL	Q9NZJ0	730 aa		18.88	■□□□□ 0.61
DDR1-233	ENST00000421124	GMEB2	Q9UKD1	530 aa		18.88	■□□□□ 0.61
DDR1-233	ENST00000421124	FZD4	Q9ULV1	537 aa		18.88	■□□□□ 0.61
DDR1-233	ENST00000421124	hCG_1818297	A0A087WSY0	165 aa		18.87	■□□□□ 0.61
DDR1-233	ENST00000421124	MIF4GD	A9UHW6	222 aa	Known RBP	18.87	■□□□□ 0.61
DDR1-233	ENST00000421124	KRIT1	O00522	736 aa		18.87	■□□□□ 0.61
DDR1-233	ENST00000421124	KRT10	P13645	584 aa		18.87	■□□□□ 0.61
DDR1-233	ENST00000421124	ACSL1	P33121	698 aa		18.87	■□□□□ 0.61
DDR1-233	ENST00000421124	DRD3	P35462	400 aa		18.87	■□□□□ 0.61
DDR1-233	ENST00000421124	PEX5	P50542	639 aa		18.87	■□□□□ 0.61
DDR1-233	ENST00000421124	METAP1	P53582	386 aa		18.87	■□□□□ 0.61
DDR1-233	ENST00000421124	COPS2	P61201	443 aa		18.87	■□□□□ 0.61
DDR1-233	ENST00000421124	DYNLT1	P63172	113 aa		18.87	■□□□□ 0.61
DDR1-233	ENST00000421124	RAD51	Q06609	339 aa		18.87	■□□□□ 0.61
DDR1-233	ENST00000421124	SLC10A2	Q12908	348 aa	Predicted RBP	18.87	■□□□□ 0.61
DDR1-233	ENST00000421124	LBR	Q14739	615 aa	Known RBP	18.87	■□□□□ 0.61
DDR1-233	ENST00000421124	PPP2R5E	Q16537	467 aa		18.87	■□□□□ 0.61
DDR1-233	ENST00000421124	MYLK3	Q32MK0	819 aa		18.87	■□□□□ 0.61
DDR1-233	ENST00000421124	POM121L1P	Q3SYA9	428 aa		18.87	■□□□□ 0.61
DDR1-233	ENST00000421124	KAZN	Q674X7	775 aa		18.87	■□□□□ 0.61
DDR1-233	ENST00000421124	UBL4B	Q8N7F7	174 aa		18.87	■□□□□ 0.61
DDR1-233	ENST00000421124	TSEN2	Q8NCE0	465 aa	Known RBP	18.87	■□□□□ 0.61
DDR1-233	ENST00000421124	OR6K2	Q8NGY2	324 aa		18.87	■□□□□ 0.61
DDR1-233	ENST00000421124	PPP1R16A	Q96I34	528 aa		18.87	■□□□□ 0.61
DDR1-233	ENST00000421124	EXOC2	Q96KP1	924 aa		18.87	■□□□□ 0.61
DDR1-233	ENST00000421124	TSGA13	Q96PP4	275 aa		18.87	■□□□□ 0.61

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