RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 GLOD4Q9HC38 313 aa12.69□□□□□ -0.38
TMEM53-206ENST00000420706 PCDH9Q9HC56 1237 aa12.69□□□□□ -0.38
TMEM53-206ENST00000420706 ARHGEF3Q9NR81 526 aa12.69□□□□□ -0.38
TMEM53-206ENST00000420706 PAK5Q9P286 719 aa12.69□□□□□ -0.38
TMEM53-206ENST00000420706 LHX3Q9UBR4 397 aa12.69□□□□□ -0.38
TMEM53-206ENST00000420706 MUTYHQ9UIF7 546 aa12.69□□□□□ -0.38
TMEM53-206ENST00000420706 FBXL21Q9UKT6 434 aa12.69□□□□□ -0.38
TMEM53-206ENST00000420706 EFCAB8A8MWE9 144 aa12.68□□□□□ -0.38
TMEM53-206ENST00000420706 TTC34A8MYJ7 566 aa12.68□□□□□ -0.38
TMEM53-206ENST00000420706 DLL1O00548 723 aa12.68□□□□□ -0.38
TMEM53-206ENST00000420706 METTL18O95568 372 aa12.68□□□□□ -0.38
TMEM53-206ENST00000420706 CHRM1P11229 460 aaPredicted RBP12.68□□□□□ -0.38
TMEM53-206ENST00000420706 NFKB1P19838 968 aa12.68□□□□□ -0.38
TMEM53-206ENST00000420706 CR2P20023 1033 aa12.68□□□□□ -0.38
TMEM53-206ENST00000420706 IL12RB1P42701 662 aa12.68□□□□□ -0.38
TMEM53-206ENST00000420706 RGRP47804 291 aa12.68□□□□□ -0.38
TMEM53-206ENST00000420706 RHOAP61586 193 aa12.68□□□□□ -0.38
TMEM53-206ENST00000420706 ST8SIA6P61647 398 aa12.68□□□□□ -0.38
TMEM53-206ENST00000420706 ITKQ08881 620 aa12.68□□□□□ -0.38
TMEM53-206ENST00000420706 NIPAL4Q0D2K0 466 aa12.68□□□□□ -0.38
TMEM53-206ENST00000420706 ZNF234Q14588 700 aa12.68□□□□□ -0.38
TMEM53-206ENST00000420706 E2F5Q15329 346 aa12.68□□□□□ -0.38
TMEM53-206ENST00000420706 PARP6Q2NL67 630 aa12.68□□□□□ -0.38
TMEM53-206ENST00000420706 ACCSLQ4AC99 568 aa12.68□□□□□ -0.38
TMEM53-206ENST00000420706 EGFLAMQ63HQ2 1017 aa12.68□□□□□ -0.38
TMEM53-206ENST00000420706 ALG1LQ6GMV1 187 aa12.68□□□□□ -0.38
TMEM53-206ENST00000420706 ITPRIPL1Q6GPH6 555 aa12.68□□□□□ -0.38
TMEM53-206ENST00000420706 C22orf39Q6P5X5 142 aa12.68□□□□□ -0.38
TMEM53-206ENST00000420706 C4orf22Q6V702 233 aa12.68□□□□□ -0.38
TMEM53-206ENST00000420706 ARHGEF18Q6ZSZ5 1173 aa12.68□□□□□ -0.38
TMEM53-206ENST00000420706 ARRDC2Q8TBH0 407 aa12.68□□□□□ -0.38
TMEM53-206ENST00000420706 KCNV2Q8TDN2 545 aa12.68□□□□□ -0.38
TMEM53-206ENST00000420706 FRS2Q8WU20 508 aa12.68□□□□□ -0.38
TMEM53-206ENST00000420706 SHDQ96IW2 340 aa12.68□□□□□ -0.38
TMEM53-206ENST00000420706 FCRL5Q96RD9 977 aa12.68□□□□□ -0.38
TMEM53-206ENST00000420706 ACOX2Q99424 681 aa12.68□□□□□ -0.38
TMEM53-206ENST00000420706 MGME1Q9BQP7 344 aa12.68□□□□□ -0.38
TMEM53-206ENST00000420706 COL25A1Q9BXS0 654 aaPredicted RBP12.68□□□□□ -0.38
TMEM53-206ENST00000420706 SLC25A51Q9H1U9 297 aa12.68□□□□□ -0.38
TMEM53-206ENST00000420706 TMEM245Q9H330 911 aa12.68□□□□□ -0.38
TMEM53-206ENST00000420706 SLC8A2Q9UPR5 921 aa12.68□□□□□ -0.38
TMEM53-206ENST00000420706 C5orf42Q9H799 3197 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 MYO18AQ92614 2054 aaKnown RBP12.67□□□□□ -0.38
TMEM53-206ENST00000420706 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.67□□□□□ -0.38
TMEM53-206ENST00000420706 TTC24A2A3L6 582 aaPredicted RBP12.67□□□□□ -0.38
TMEM53-206ENST00000420706 WASH3PC4AMC7 463 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 BHMG1C9JSJ3 638 aaPredicted RBP12.67□□□□□ -0.38
TMEM53-206ENST00000420706 NPC1O15118 1278 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 GSRP00390 522 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 CHRNB1P11230 501 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 CES1P23141 567 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 IVDP26440 423 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 TIE1P35590 1138 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 FDFT1P37268 417 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 CSNK1DP48730 415 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 VPS41P49754 854 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 SCNN1BP51168 640 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 SEC13P55735 322 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 SNRPD1P62314 119 aaKnown RBP12.67□□□□□ -0.38
TMEM53-206ENST00000420706 TUBB4BP68371 445 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 MRPS21P82921 87 aaKnown RBP12.67□□□□□ -0.38
TMEM53-206ENST00000420706 ZXDAP98168 799 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 SLC7A5Q01650 507 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 DSC2Q02487 901 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 GPS1Q13098 491 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 ENPP2Q13822 863 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 CCINQ13939 588 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 FBXO43Q4G163 708 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 FNDC3BQ53EP0 1204 aaKnown RBP12.67□□□□□ -0.38
TMEM53-206ENST00000420706 CARD16Q5EG05 197 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 TEX35Q5T0J7 233 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 SRLQ86TD4 932 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 PLPP6Q8IY26 295 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 ZNF687Q8N1G0 1237 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 TAB3Q8N5C8 712 aaPredicted RBP12.67□□□□□ -0.38
TMEM53-206ENST00000420706 PCDH20Q8N6Y1 951 aaKnown RBP12.67□□□□□ -0.38
TMEM53-206ENST00000420706 ZNF513Q8N8E2 541 aaPredicted RBP12.67□□□□□ -0.38
TMEM53-206ENST00000420706 CCHCR1Q8TD31 782 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 PTPRN2Q92932 1015 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 NSMCE3Q96MG7 304 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 NUDCD1Q96RS6 583 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 SEMA3CQ99985 751 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 ERP44Q9BS26 406 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 POLR1EQ9GZS1 481 aaKnown RBP12.67□□□□□ -0.38
TMEM53-206ENST00000420706 GBA3Q9H227 469 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 TNKS2Q9H2K2 1166 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 MTG2Q9H4K7 406 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 ETNK1Q9HBU6 452 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 ZDHHC4Q9NPG8 344 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 HAUS2Q9NVX0 235 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 SUN2Q9UH99 717 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 RSPH14Q9UHP6 348 aa12.67□□□□□ -0.38
TMEM53-206ENST00000420706 DMGDHQ9UI17 866 aaKnown RBP12.67□□□□□ -0.38
TMEM53-206ENST00000420706 NDRG2Q9UN36 371 aaKnown RBP12.67□□□□□ -0.38
TMEM53-206ENST00000420706 MUC22E2RYF6 1773 aaPredicted RBP12.66□□□□□ -0.38
TMEM53-206ENST00000420706 KANSL1LA0AUZ9 987 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 F5H423 210 aaPredicted RBP12.66□□□□□ -0.38
TMEM53-206ENST00000420706 INSIG1O15503 277 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 GJB3O75712 270 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 HEXIM1O94992 359 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms