RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 DSC2Q02487 901 aa21.29■■□□□ 1
GPC1-202ENST00000420138 FSCBQ5H9T9 825 aa21.29■■□□□ 1
GPC1-202ENST00000420138 SLC26A11Q86WA9 606 aa21.29■■□□□ 1
GPC1-202ENST00000420138 ATXN2LQ8WWM7 1075 aaKnown RBP21.29■■□□□ 1
GPC1-202ENST00000420138 ZNF599Q96NL3 588 aa21.29■■□□□ 1
GPC1-202ENST00000420138 FICDQ9BVA6 458 aa21.29■■□□□ 1
GPC1-202ENST00000420138 CFAP97Q9P2B7 532 aa21.29■■□□□ 1
GPC1-202ENST00000420138 ZCWPW2A0A1B0GU75 182 aa21.28■■□□□ 1
GPC1-202ENST00000420138 TTC24A2A3L6 582 aaPredicted RBP21.28■■□□□ 1
GPC1-202ENST00000420138 PER2O15055 1255 aa21.28■■□□□ 1
GPC1-202ENST00000420138 PMPCBO75439 489 aa21.28■■□□□ 1
GPC1-202ENST00000420138 NEBLO76041 1014 aa21.28■■□□□ 1
GPC1-202ENST00000420138 RHOCP08134 193 aa21.28■■□□□ 1
GPC1-202ENST00000420138 KRT15P19012 456 aa21.28■■□□□ 1
GPC1-202ENST00000420138 ETFBP38117 255 aa21.28■■□□□ 1
GPC1-202ENST00000420138 MPP3Q13368 585 aa21.28■■□□□ 1
GPC1-202ENST00000420138 SLC5A9Q2M3M2 681 aa21.28■■□□□ 1
GPC1-202ENST00000420138 SRLQ86TD4 932 aa21.28■■□□□ 1
GPC1-202ENST00000420138 TDHQ8IZJ6 230 aa21.28■■□□□ 1
GPC1-202ENST00000420138 NSMCE1Q8WV22 266 aa21.28■■□□□ 1
GPC1-202ENST00000420138 GCNAQ96QF7 691 aa21.28■■□□□ 1
GPC1-202ENST00000420138 IL22Q9GZX6 179 aa21.28■■□□□ 1
GPC1-202ENST00000420138 SMG9Q9H0W8 520 aaKnown RBP21.28■■□□□ 1
GPC1-202ENST00000420138 ATP13A1Q9HD20 1204 aa21.28■■□□□ 1
GPC1-202ENST00000420138 ZNF180Q9UJW8 692 aa21.28■■□□□ 1
GPC1-202ENST00000420138 RRP15Q9Y3B9 282 aaKnown RBP21.28■■□□□ 1
GPC1-202ENST00000420138 RPS6KL1Q9Y6S9 549 aa21.28■■□□□ 1
GPC1-202ENST00000420138 CHD5Q8TDI0 1954 aa21.27■■□□□ 1
GPC1-202ENST00000420138 AP3B1O00203 1094 aa21.27■■□□□ 1
GPC1-202ENST00000420138 ATP9BO43861 1147 aa21.27■■□□□ 1
GPC1-202ENST00000420138 TBL1XO60907 577 aa21.27■■□□□ 1
GPC1-202ENST00000420138 GJB3O75712 270 aa21.27■■□□□ 1
GPC1-202ENST00000420138 POLBP06746 335 aa21.27■■□□□ 1
GPC1-202ENST00000420138 PTPN2P17706 415 aa21.27■■□□□ 1
GPC1-202ENST00000420138 BMP8BP34820 402 aa21.27■■□□□ 1
GPC1-202ENST00000420138 WNT3AP56704 352 aa21.27■■□□□ 1
GPC1-202ENST00000420138 SPANXN3Q5MJ09 141 aa21.27■■□□□ 1
GPC1-202ENST00000420138 IL31Q6EBC2 164 aa21.27■■□□□ 1
GPC1-202ENST00000420138 SPATS2Q86XZ4 545 aaKnown RBP21.27■■□□□ 1
GPC1-202ENST00000420138 BBS7Q8IWZ6 715 aa21.27■■□□□ 1
GPC1-202ENST00000420138 CTAGE3PQ8IX95 158 aa21.27■■□□□ 1
GPC1-202ENST00000420138 RIN3Q8TB24 985 aa21.27■■□□□ 1
GPC1-202ENST00000420138 SPON2Q9BUD6 331 aa21.27■■□□□ 1
GPC1-202ENST00000420138 TRABDQ9H4I3 376 aa21.27■■□□□ 1
GPC1-202ENST00000420138 CHRAC1Q9NRG0 131 aa21.27■■□□□ 1
GPC1-202ENST00000420138 ARHGAP26Q9UNA1 814 aa21.27■■□□□ 1
GPC1-202ENST00000420138 CDH23Q9H251 3354 aa21.27■■□□□ 1
GPC1-202ENST00000420138 FAM237BA0A1B0GVD1 139 aa21.27■□□□□ 0.99
GPC1-202ENST00000420138 LEFTY2O00292 366 aa21.27■□□□□ 0.99
GPC1-202ENST00000420138 USP1O94782 785 aa21.27■□□□□ 0.99
GPC1-202ENST00000420138 RHOP08100 348 aa21.27■□□□□ 0.99
GPC1-202ENST00000420138 INHBAP08476 426 aa21.27■□□□□ 0.99
GPC1-202ENST00000420138 CD86P42081 329 aa21.27■□□□□ 0.99
GPC1-202ENST00000420138 ANKRD20A4Q4UJ75 823 aa21.27■□□□□ 0.99
GPC1-202ENST00000420138 ALG1LQ6GMV1 187 aa21.27■□□□□ 0.99
GPC1-202ENST00000420138 HJURPQ8NCD3 748 aaPredicted RBP21.27■□□□□ 0.99
GPC1-202ENST00000420138 TMA16Q96EY4 203 aaKnown RBP21.27■□□□□ 0.99
GPC1-202ENST00000420138 ARNT2Q9HBZ2 717 aa21.27■□□□□ 0.99
GPC1-202ENST00000420138 VPS45Q9NRW7 570 aa21.27■□□□□ 0.99
GPC1-202ENST00000420138 INTS9Q9NV88 658 aaKnown RBP21.27■□□□□ 0.99
GPC1-202ENST00000420138 SENP1Q9P0U3 644 aa21.27■□□□□ 0.99
GPC1-202ENST00000420138 SAMD15Q9P1V8 674 aa21.27■□□□□ 0.99
GPC1-202ENST00000420138 SOX13Q9UN79 622 aa21.27■□□□□ 0.99
GPC1-202ENST00000420138 CCL26Q9Y258 94 aa21.27■□□□□ 0.99
GPC1-202ENST00000420138 OR51B4Q9Y5P0 310 aa21.27■□□□□ 0.99
GPC1-202ENST00000420138 MAGEB16A2A368 324 aa21.26■□□□□ 0.99
GPC1-202ENST00000420138 CHRNA4P43681 627 aa21.26■□□□□ 0.99
GPC1-202ENST00000420138 OXCT1P55809 520 aa21.26■□□□□ 0.99
GPC1-202ENST00000420138 ITKQ08881 620 aa21.26■□□□□ 0.99
GPC1-202ENST00000420138 FRG1Q14331 258 aaKnown RBP21.26■□□□□ 0.99
GPC1-202ENST00000420138 TEAD2Q15562 447 aa21.26■□□□□ 0.99
GPC1-202ENST00000420138 GPR158Q5T848 1215 aa21.26■□□□□ 0.99
GPC1-202ENST00000420138 RNF219Q5W0B1 726 aaPredicted RBP21.26■□□□□ 0.99
GPC1-202ENST00000420138 POTEHQ6S545 545 aa21.26■□□□□ 0.99
GPC1-202ENST00000420138 SH2D5Q6ZV89 423 aa21.26■□□□□ 0.99
GPC1-202ENST00000420138 ADGRD2Q7Z7M1 963 aa21.26■□□□□ 0.99
GPC1-202ENST00000420138 C4orf33Q8N1A6 199 aa21.26■□□□□ 0.99
GPC1-202ENST00000420138 CPXM2Q8N436 756 aa21.26■□□□□ 0.99
GPC1-202ENST00000420138 WFDC5Q8TCV5 224 aa21.26■□□□□ 0.99
GPC1-202ENST00000420138 MFSD3Q96ES6 412 aa21.26■□□□□ 0.99
GPC1-202ENST00000420138 ZNF778Q96MU6 729 aa21.26■□□□□ 0.99
GPC1-202ENST00000420138 KIFC1Q9BW19 673 aa21.26■□□□□ 0.99
GPC1-202ENST00000420138 FAM107BQ9H098 131 aa21.26■□□□□ 0.99
GPC1-202ENST00000420138 SLC17A6Q9P2U8 582 aa21.26■□□□□ 0.99
GPC1-202ENST00000420138 LSM7Q9UK45 103 aaKnown RBP21.26■□□□□ 0.99
GPC1-202ENST00000420138 HCFC2Q9Y5Z7 792 aa21.26■□□□□ 0.99
GPC1-202ENST00000420138 FAM169AQ9Y6X4 670 aa21.26■□□□□ 0.99
GPC1-202ENST00000420138 HMX2A2RU54 273 aa21.25■□□□□ 0.99
GPC1-202ENST00000420138 CD160O95971 181 aa21.25■□□□□ 0.99
GPC1-202ENST00000420138 HNRNPA1P09651 372 aaKnown RBP eCLIP21.25■□□□□ 0.99
GPC1-202ENST00000420138 NTHL1P78549 312 aa21.25■□□□□ 0.99
GPC1-202ENST00000420138 MSLNQ13421 630 aaPredicted RBP21.25■□□□□ 0.99
GPC1-202ENST00000420138 PRSS36Q5K4E3 855 aa21.25■□□□□ 0.99
GPC1-202ENST00000420138 ZNF783Q6ZMS7 281 aa21.25■□□□□ 0.99
GPC1-202ENST00000420138 MARK2Q7KZI7 788 aaKnown RBP21.25■□□□□ 0.99
GPC1-202ENST00000420138 RBM23Q86U06 439 aaKnown RBP21.25■□□□□ 0.99
GPC1-202ENST00000420138 CCDC117Q8IWD4 279 aaPredicted RBP21.25■□□□□ 0.99
GPC1-202ENST00000420138 GDPD5Q8WTR4 605 aa21.25■□□□□ 0.99
GPC1-202ENST00000420138 ZNF707Q96C28 371 aaPredicted RBP21.25■□□□□ 0.99
GPC1-202ENST00000420138 ALG14Q96F25 216 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms