RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 HEPHQ9BQS7 1158 aa20.69■□□□□ 0.9
GTF3A-202ENST00000419181 TM6SF2Q9BZW4 377 aa20.69■□□□□ 0.9
GTF3A-202ENST00000419181 LRRC19Q9H756 370 aa20.69■□□□□ 0.9
GTF3A-202ENST00000419181 IP6K2Q9UHH9 426 aa20.69■□□□□ 0.9
GTF3A-202ENST00000419181 TBC1D3DA0A087WVF3 549 aa20.68■□□□□ 0.9
GTF3A-202ENST00000419181 TBC1D3IA0A087WXS9 549 aa20.68■□□□□ 0.9
GTF3A-202ENST00000419181 TBC1D3EA0A087X179 549 aa20.68■□□□□ 0.9
GTF3A-202ENST00000419181 TBC1D3KA0A087X1G2 549 aa20.68■□□□□ 0.9
GTF3A-202ENST00000419181 TBC1D3FA6NER0 549 aaPredicted RBP20.68■□□□□ 0.9
GTF3A-202ENST00000419181 TBC1D3LB9A6J9 549 aa20.68■□□□□ 0.9
GTF3A-202ENST00000419181 BUB1O43683 1085 aa20.68■□□□□ 0.9
GTF3A-202ENST00000419181 OPHN1O60890 802 aa20.68■□□□□ 0.9
GTF3A-202ENST00000419181 KCNK5O95279 499 aa20.68■□□□□ 0.9
GTF3A-202ENST00000419181 TBC1D3HP0C7X1 549 aa20.68■□□□□ 0.9
GTF3A-202ENST00000419181 HCAR3P49019 387 aa20.68■□□□□ 0.9
GTF3A-202ENST00000419181 DNA2P51530 1060 aa20.68■□□□□ 0.9
GTF3A-202ENST00000419181 ZNF135P52742 658 aaPredicted RBP20.68■□□□□ 0.9
GTF3A-202ENST00000419181 NDST2P52849 883 aa20.68■□□□□ 0.9
GTF3A-202ENST00000419181 TAS2R38P59533 333 aa20.68■□□□□ 0.9
GTF3A-202ENST00000419181 RACK1P63244 317 aaKnown RBP20.68■□□□□ 0.9
GTF3A-202ENST00000419181 PPP6R3Q5H9R7 873 aaPredicted RBP20.68■□□□□ 0.9
GTF3A-202ENST00000419181 TBC1D3GQ6DHY5 549 aa20.68■□□□□ 0.9
GTF3A-202ENST00000419181 TBC1D3CQ6IPX1 549 aa20.68■□□□□ 0.9
GTF3A-202ENST00000419181 ZNF354CQ86Y25 554 aa20.68■□□□□ 0.9
GTF3A-202ENST00000419181 TBC1D3Q8IZP1 549 aaPredicted RBP20.68■□□□□ 0.9
GTF3A-202ENST00000419181 CASKIN2Q8WXE0 1202 aa20.68■□□□□ 0.9
GTF3A-202ENST00000419181 BTBD6Q96KE9 485 aa20.68■□□□□ 0.9
GTF3A-202ENST00000419181 HDAC8Q9BY41 377 aa20.68■□□□□ 0.9
GTF3A-202ENST00000419181 ZNHIT6Q9NWK9 470 aaKnown RBP20.68■□□□□ 0.9
GTF3A-202ENST00000419181 TP53BP1Q12888 1972 aaPredicted RBP20.68■□□□□ 0.9
GTF3A-202ENST00000419181 DOCK9Q9BZ29 2069 aa20.67■□□□□ 0.9
GTF3A-202ENST00000419181 A0A1B0GVT2 93 aa20.67■□□□□ 0.9
GTF3A-202ENST00000419181 UPK3BL1B0FP48 263 aa20.67■□□□□ 0.9
GTF3A-202ENST00000419181 UPK3BL2E5RIL1 263 aa20.67■□□□□ 0.9
GTF3A-202ENST00000419181 TMCC1O94876 653 aa20.67■□□□□ 0.9
GTF3A-202ENST00000419181 GSRP00390 522 aa20.67■□□□□ 0.9
GTF3A-202ENST00000419181 ADRB1P08588 477 aa20.67■□□□□ 0.9
GTF3A-202ENST00000419181 ERCC2P18074 760 aa20.67■□□□□ 0.9
GTF3A-202ENST00000419181 CSRP1P21291 193 aaKnown RBP20.67■□□□□ 0.9
GTF3A-202ENST00000419181 ADKP55263 362 aaKnown RBP20.67■□□□□ 0.9
GTF3A-202ENST00000419181 CCDC15Q0P6D6 951 aa20.67■□□□□ 0.9
GTF3A-202ENST00000419181 TBX2Q13207 712 aaPredicted RBP20.67■□□□□ 0.9
GTF3A-202ENST00000419181 TEAD4Q15561 434 aa20.67■□□□□ 0.9
GTF3A-202ENST00000419181 DPYSL2Q16555 572 aa20.67■□□□□ 0.9
GTF3A-202ENST00000419181 TSR1Q2NL82 804 aaKnown RBP20.67■□□□□ 0.9
GTF3A-202ENST00000419181 BOLA3Q53S33 107 aa20.67■□□□□ 0.9
GTF3A-202ENST00000419181 INO80DQ53TQ3 878 aaPredicted RBP20.67■□□□□ 0.9
GTF3A-202ENST00000419181 KCNT1Q5JUK3 1230 aa20.67■□□□□ 0.9
GTF3A-202ENST00000419181 TRIM69Q86WT6 500 aa20.67■□□□□ 0.9
GTF3A-202ENST00000419181 OR2AP1Q8NGE2 309 aa20.67■□□□□ 0.9
GTF3A-202ENST00000419181 VOPP1Q96AW1 172 aa20.67■□□□□ 0.9
GTF3A-202ENST00000419181 PPP1R16AQ96I34 528 aa20.67■□□□□ 0.9
GTF3A-202ENST00000419181 SLC6A18Q96N87 628 aa20.67■□□□□ 0.9
GTF3A-202ENST00000419181 PACSIN1Q9BY11 444 aa20.67■□□□□ 0.9
GTF3A-202ENST00000419181 PREBQ9HCU5 417 aa20.67■□□□□ 0.9
GTF3A-202ENST00000419181 DYRK4Q9NR20 520 aa20.67■□□□□ 0.9
GTF3A-202ENST00000419181 CWC15Q9P013 229 aaKnown RBP20.67■□□□□ 0.9
GTF3A-202ENST00000419181 HECAQ9UBI9 543 aaPredicted RBP20.67■□□□□ 0.9
GTF3A-202ENST00000419181 TMEM131Q92545 1883 aa20.67■□□□□ 0.9
GTF3A-202ENST00000419181 MYO1FO00160 1098 aa20.66■□□□□ 0.9
GTF3A-202ENST00000419181 DAPK3O43293 454 aa20.66■□□□□ 0.9
GTF3A-202ENST00000419181 ITGB7P26010 798 aa20.66■□□□□ 0.9
GTF3A-202ENST00000419181 SNRPD1P62314 119 aaKnown RBP20.66■□□□□ 0.9
GTF3A-202ENST00000419181 SLC25A11Q02978 314 aaKnown RBP20.66■□□□□ 0.9
GTF3A-202ENST00000419181 DPYSQ14117 519 aa20.66■□□□□ 0.9
GTF3A-202ENST00000419181 KIF19Q2TAC6 998 aa20.66■□□□□ 0.9
GTF3A-202ENST00000419181 SMTNL2Q2TAL5 461 aa20.66■□□□□ 0.9
GTF3A-202ENST00000419181 AFMIDQ63HM1 303 aa20.66■□□□□ 0.9
GTF3A-202ENST00000419181 IL27RAQ6UWB1 636 aa20.66■□□□□ 0.9
GTF3A-202ENST00000419181 LAYNQ6UX15 382 aa20.66■□□□□ 0.9
GTF3A-202ENST00000419181 ERN2Q76MJ5 926 aaKnown RBP20.66■□□□□ 0.9
GTF3A-202ENST00000419181 PIP4P1Q86T03 277 aa20.66■□□□□ 0.9
GTF3A-202ENST00000419181 CNGA4Q8IV77 575 aa20.66■□□□□ 0.9
GTF3A-202ENST00000419181 NPWQ8N729 165 aa20.66■□□□□ 0.9
GTF3A-202ENST00000419181 OR6K2Q8NGY2 324 aa20.66■□□□□ 0.9
GTF3A-202ENST00000419181 ZNF564Q8TBZ8 553 aaPredicted RBP20.66■□□□□ 0.9
GTF3A-202ENST00000419181 TEKT4Q8WW24 435 aa20.66■□□□□ 0.9
GTF3A-202ENST00000419181 CELF6Q96J87 481 aaKnown RBP20.66■□□□□ 0.9
GTF3A-202ENST00000419181 LRIG1Q96JA1 1093 aa20.66■□□□□ 0.9
GTF3A-202ENST00000419181 CHP1Q99653 195 aa20.66■□□□□ 0.9
GTF3A-202ENST00000419181 DEF6Q9H4E7 631 aa20.66■□□□□ 0.9
GTF3A-202ENST00000419181 ZDHHC6Q9H6R6 413 aa20.66■□□□□ 0.9
GTF3A-202ENST00000419181 ZWILCHQ9H900 591 aa20.66■□□□□ 0.9
GTF3A-202ENST00000419181 PDFQ9HBH1 243 aa20.66■□□□□ 0.9
GTF3A-202ENST00000419181 AKR1B10O60218 316 aa20.65■□□□□ 0.9
GTF3A-202ENST00000419181 CER1O95813 267 aa20.65■□□□□ 0.9
GTF3A-202ENST00000419181 RARAP10276 462 aa20.65■□□□□ 0.9
GTF3A-202ENST00000419181 CD59P13987 128 aa20.65■□□□□ 0.9
GTF3A-202ENST00000419181 NOVA1P51513 510 aaKnown RBP20.65■□□□□ 0.9
GTF3A-202ENST00000419181 SLC14A1Q13336 389 aa20.65■□□□□ 0.9
GTF3A-202ENST00000419181 HLA-BQ31612 363 aa20.65■□□□□ 0.9
GTF3A-202ENST00000419181 TXNRD3NBQ6F5E7 133 aa20.65■□□□□ 0.9
GTF3A-202ENST00000419181 PSAPL1Q6NUJ1 521 aa20.65■□□□□ 0.9
GTF3A-202ENST00000419181 ARHGAP12Q8IWW6 846 aa20.65■□□□□ 0.9
GTF3A-202ENST00000419181 CTNNBL1Q8WYA6 563 aaPredicted RBP20.65■□□□□ 0.9
GTF3A-202ENST00000419181 TRIM5Q9C035 493 aa20.65■□□□□ 0.9
GTF3A-202ENST00000419181 SLC39A8Q9C0K1 460 aa20.65■□□□□ 0.9
GTF3A-202ENST00000419181 GAREM1Q9H706 876 aa20.65■□□□□ 0.9
GTF3A-202ENST00000419181 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.65■□□□□ 0.9
GTF3A-202ENST00000419181 CTTNBP2NLQ9P2B4 639 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms