RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 ASNA1O43681 348 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 UNGP13051 313 aaPredicted RBP13.05□□□□□ -0.32
SCN1B-202ENST00000415950 GMPRP36959 345 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 FEN1P39748 380 aaKnown RBP13.05□□□□□ -0.32
SCN1B-202ENST00000415950 IDH2P48735 452 aaKnown RBP13.05□□□□□ -0.32
SCN1B-202ENST00000415950 CDK7P50613 346 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 HIST2H2ACQ16777 129 aaPredicted RBP13.05□□□□□ -0.32
SCN1B-202ENST00000415950 HIST2H2AA3Q6FI13 130 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 TLK2Q86UE8 772 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 ZDHHC13Q8IUH4 622 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 PYROXD2Q8N2H3 581 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 PLD5Q8N7P1 536 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 ZNF781Q8N8C0 355 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 NAT14Q8WUY8 206 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 NKD2Q969F2 451 aaPredicted RBP13.05□□□□□ -0.32
SCN1B-202ENST00000415950 P2RX7Q99572 595 aaKnown RBP13.05□□□□□ -0.32
SCN1B-202ENST00000415950 MYPNQ86TC9 1320 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 SMIM31A0A1B0GVY4 71 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 MED26O95402 600 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 CCDC166P0CW27 439 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 IL1R2P27930 398 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 WEE1P30291 646 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 CAPZA2P47755 286 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 NPY2RP49146 381 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 GPX6P59796 221 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 GRTP1Q5TC63 336 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 UGT3A1Q6NUS8 523 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 ERAP2Q6P179 960 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 KRT78Q8N1N4 520 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 OR52K2Q8NGK3 314 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 MPP6Q9NZW5 540 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 BTRCQ9Y297 605 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 A0A0A0MRY4 1105 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 H3BN98 237 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 KPNA4O00629 521 aaPredicted RBP13.05□□□□□ -0.32
SCN1B-202ENST00000415950 FESP07332 822 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 SERPINH1P50454 418 aaKnown RBP13.05□□□□□ -0.32
SCN1B-202ENST00000415950 FBXO47Q5MNV8 452 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 SAMD4BQ5PRF9 694 aaKnown RBP13.05□□□□□ -0.32
SCN1B-202ENST00000415950 ANKS6Q68DC2 871 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 BPIFB6Q8NFQ5 453 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 OSCP1Q8WVF1 389 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 MAML3Q96JK9 1138 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 SPATA13Q96N96 652 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 SPRTNQ9H040 489 aaPredicted RBP13.05□□□□□ -0.32
SCN1B-202ENST00000415950 HDHD2Q9H0R4 259 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 PCDH18Q9HCL0 1135 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 PADI4Q9UM07 663 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 DUSP12Q9UNI6 340 aa13.05□□□□□ -0.32
SCN1B-202ENST00000415950 CASZ1Q86V15 1759 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 F5H5T6 163 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 TK2O00142 265 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 ITM2AO43736 263 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 C4BPAP04003 597 aaKnown RBP13.04□□□□□ -0.32
SCN1B-202ENST00000415950 CKMP06732 381 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 USP17L7P0C7H9 530 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 NFKB1P19838 968 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 ALDH9A1P49189 494 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 CCNG1P51959 295 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 NR1H2P55055 460 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 PFKFB4Q16877 469 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 SPANXN2Q5MJ10 180 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 PPP1R26Q5T8A7 1209 aaPredicted RBP13.04□□□□□ -0.32
SCN1B-202ENST00000415950 FAM180AQ6UWF9 173 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 ERO1BQ86YB8 467 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 C12orf50Q8NA57 414 aaPredicted RBP13.04□□□□□ -0.32
SCN1B-202ENST00000415950 ELMO1Q92556 727 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 FAXDC2Q96IV6 333 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 SPATA16Q9BXB7 569 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 RAD18Q9NS91 495 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 ATXN10Q9UBB4 475 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 SNX8Q9Y5X2 465 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 A8MX80 341 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 CLDN5O00501 218 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 SCAMP3O14828 347 aaKnown RBP13.04□□□□□ -0.32
SCN1B-202ENST00000415950 SEC22BO75396 215 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 NTRK1P04629 796 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 UBA1P22314 1058 aaKnown RBP13.04□□□□□ -0.32
SCN1B-202ENST00000415950 NAA20P61599 178 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 ZPBP2Q6X784 338 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 TMEM26Q6ZUK4 368 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 DSELQ8IZU8 1212 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 PGBD3Q8N328 593 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 MPP5Q8N3R9 675 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 CHST13Q8NET6 341 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 LPCAT1Q8NF37 534 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 P2RY11Q96G91 374 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 ZFP42Q96MM3 310 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 CPNE1Q99829 537 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 PREBQ9HCU5 417 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 SEMA4BQ9NPR2 832 aaPredicted RBP13.04□□□□□ -0.32
SCN1B-202ENST00000415950 ZSCAN32Q9NX65 697 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 VPS28Q9UK41 221 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 SLC11A2P49281 568 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 POU5F1Q01860 360 aaKnown RBP13.04□□□□□ -0.32
SCN1B-202ENST00000415950 ARL13AQ5H913 290 aaPredicted RBP13.04□□□□□ -0.32
SCN1B-202ENST00000415950 ZFP1Q6P2D0 407 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 ANKS1BQ7Z6G8 1248 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 TBC1D19Q8N5T2 526 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 CAPSLQ8WWF8 208 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms