RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 RWDD4Q6NW29 188 aaKnown RBP11.78□□□□□ -0.52
RFFL-205ENST00000415395 DNAJB7Q7Z6W7 309 aaPredicted RBP11.78□□□□□ -0.52
RFFL-205ENST00000415395 LRRC6Q86X45 466 aa11.78□□□□□ -0.52
RFFL-205ENST00000415395 MIB1Q86YT6 1006 aa11.78□□□□□ -0.52
RFFL-205ENST00000415395 CRLF3Q8IUI8 442 aa11.78□□□□□ -0.52
RFFL-205ENST00000415395 ZNF683Q8IZ20 524 aa11.78□□□□□ -0.52
RFFL-205ENST00000415395 PDCD7Q8N8D1 485 aaKnown RBP11.78□□□□□ -0.52
RFFL-205ENST00000415395 RTL3Q8N8U3 475 aaKnown RBP11.78□□□□□ -0.52
RFFL-205ENST00000415395 TTC8Q8TAM2 541 aa11.78□□□□□ -0.52
RFFL-205ENST00000415395 KLHL5Q96PQ7 755 aa11.78□□□□□ -0.52
RFFL-205ENST00000415395 FAM111AQ96PZ2 611 aa11.78□□□□□ -0.52
RFFL-205ENST00000415395 CCDC28BQ9BUN5 200 aa11.78□□□□□ -0.52
RFFL-205ENST00000415395 SNX10Q9Y5X0 201 aa11.78□□□□□ -0.52
RFFL-205ENST00000415395 TEX264Q9Y6I9 313 aa11.78□□□□□ -0.52
RFFL-205ENST00000415395 LINC01553A4QN01 128 aa11.77□□□□□ -0.52
RFFL-205ENST00000415395 SPECC1L-ADORA2AF8WAN1 911 aa11.77□□□□□ -0.52
RFFL-205ENST00000415395 GOLGA8RI6L899 631 aa11.77□□□□□ -0.52
RFFL-205ENST00000415395 FCHO1O14526 889 aa11.77□□□□□ -0.52
RFFL-205ENST00000415395 BIRC5O15392 142 aa11.77□□□□□ -0.52
RFFL-205ENST00000415395 MAP3K6O95382 1288 aa11.77□□□□□ -0.52
RFFL-205ENST00000415395 MOCS2O96007 188 aaPredicted RBP11.77□□□□□ -0.52
RFFL-205ENST00000415395 DLDP09622 509 aaKnown RBP11.77□□□□□ -0.52
RFFL-205ENST00000415395 SRGAP2BP0DMP2 458 aa11.77□□□□□ -0.52
RFFL-205ENST00000415395 VAV1P15498 845 aa11.77□□□□□ -0.52
RFFL-205ENST00000415395 RHOQP17081 205 aa11.77□□□□□ -0.52
RFFL-205ENST00000415395 TPSB2P20231 275 aa11.77□□□□□ -0.52
RFFL-205ENST00000415395 OVGP1Q12889 678 aa11.77□□□□□ -0.52
RFFL-205ENST00000415395 KPNB1Q14974 876 aaKnown RBP11.77□□□□□ -0.52
RFFL-205ENST00000415395 TPSAB1Q15661 275 aa11.77□□□□□ -0.52
RFFL-205ENST00000415395 MSS51Q4VC12 460 aa11.77□□□□□ -0.52
RFFL-205ENST00000415395 ANO7Q6IWH7 933 aa11.77□□□□□ -0.52
RFFL-205ENST00000415395 LRRC74BQ6ZQY2 392 aa11.77□□□□□ -0.52
RFFL-205ENST00000415395 NET1Q7Z628 596 aaPredicted RBP11.77□□□□□ -0.52
RFFL-205ENST00000415395 NPWQ8N729 165 aa11.77□□□□□ -0.52
RFFL-205ENST00000415395 E2F7Q96AV8 911 aa11.77□□□□□ -0.52
RFFL-205ENST00000415395 P2RY11Q96G91 374 aa11.77□□□□□ -0.52
RFFL-205ENST00000415395 TSGA13Q96PP4 275 aa11.77□□□□□ -0.52
RFFL-205ENST00000415395 SRPK1Q96SB4 655 aaKnown RBP11.77□□□□□ -0.52
RFFL-205ENST00000415395 LGMNQ99538 433 aa11.77□□□□□ -0.52
RFFL-205ENST00000415395 SH3GL3Q99963 347 aa11.77□□□□□ -0.52
RFFL-205ENST00000415395 TCF25Q9BQ70 676 aa11.77□□□□□ -0.52
RFFL-205ENST00000415395 NACA2Q9H009 215 aa11.77□□□□□ -0.52
RFFL-205ENST00000415395 VCX3BQ9H321 246 aa11.77□□□□□ -0.52
RFFL-205ENST00000415395 STN1Q9H668 368 aaKnown RBP11.77□□□□□ -0.52
RFFL-205ENST00000415395 ENTPD7Q9NQZ7 604 aa11.77□□□□□ -0.52
RFFL-205ENST00000415395 TLR9Q9NR96 1032 aa11.77□□□□□ -0.52
RFFL-205ENST00000415395 RAB6BQ9NRW1 208 aa11.77□□□□□ -0.52
RFFL-205ENST00000415395 ARL8BQ9NVJ2 186 aa11.77□□□□□ -0.52
RFFL-205ENST00000415395 NMRK1Q9NWW6 199 aa11.77□□□□□ -0.52
RFFL-205ENST00000415395 NUP205Q92621 2012 aa11.77□□□□□ -0.52
RFFL-205ENST00000415395 GBF1Q92538 1859 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 LCHNA4D1U4 455 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 DRGXA6NNA5 263 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 TRIM49D1C9J1S8 452 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 COCHO43405 550 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 BANF1O75531 89 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 LATS1O95835 1130 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 GLUD1P00367 558 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 LRG1P02750 347 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 FESP07332 822 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 MYL2P10916 166 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 PYGBP11216 843 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 PFKLP17858 780 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 GM2AP17900 193 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 BGNP21810 368 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 CCNCP24863 283 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 CCNFP41002 786 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 ABL2P42684 1182 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 SLC11A2P49281 568 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 HARS2P49590 506 aaKnown RBP11.77□□□□□ -0.53
RFFL-205ENST00000415395 NDST2P52849 883 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 AP2B1P63010 937 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 SARNPP82979 210 aaKnown RBP11.77□□□□□ -0.53
RFFL-205ENST00000415395 SEMA5AQ13591 1074 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 KBTBD12Q3ZCT8 623 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 C5orf22Q49AR2 442 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 AFMIDQ63HM1 303 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 PDE12Q6L8Q7 609 aaKnown RBP11.77□□□□□ -0.53
RFFL-205ENST00000415395 CTAGE3PQ8IX95 158 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 ELMOD1Q8N336 334 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 MRPL43Q8N983 215 aaKnown RBP11.77□□□□□ -0.53
RFFL-205ENST00000415395 CCNYQ8ND76 341 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 MCUQ8NE86 351 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 SPPL3Q8TCT6 385 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 FATE1Q969F0 183 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 TRAPPC9Q96Q05 1148 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 TSC22D3Q99576 134 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 MIPEPQ99797 713 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 ZYG11BQ9C0D3 744 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 EIF2B3Q9NR50 452 aaKnown RBP11.77□□□□□ -0.53
RFFL-205ENST00000415395 TMEM248Q9NWD8 314 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 IGSF9Q9P2J2 1179 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 ZC3H7BQ9UGR2 993 aaKnown RBP11.77□□□□□ -0.53
RFFL-205ENST00000415395 TAGLN3Q9UI15 199 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 TRHDEQ9UKU6 1024 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 SHROOM3Q8TF72 1996 aa11.77□□□□□ -0.53
RFFL-205ENST00000415395 MAGEA13PA6NCF6 341 aa11.76□□□□□ -0.53
RFFL-205ENST00000415395 C2orf71A6NGG8 1288 aa11.76□□□□□ -0.53
RFFL-205ENST00000415395 RNF103O00237 685 aa11.76□□□□□ -0.53
RFFL-205ENST00000415395 F11P03951 625 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms