RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 ACOT9Q9Y305 439 aa15.19■□□□□ 0.02
TTC39A-208ENST00000413473 CCL15-CCL14A0A0B4J2E2 113 aa15.19■□□□□ 0.02
TTC39A-208ENST00000413473 TARM1B6A8C7 271 aa15.19■□□□□ 0.02
TTC39A-208ENST00000413473 DFFAO00273 331 aa15.19■□□□□ 0.02
TTC39A-208ENST00000413473 FAM163BP0C2L3 166 aa15.19■□□□□ 0.02
TTC39A-208ENST00000413473 XRCC1P18887 633 aaPredicted RBP15.19■□□□□ 0.02
TTC39A-208ENST00000413473 GSTT1P30711 240 aa15.19■□□□□ 0.02
TTC39A-208ENST00000413473 PPARGP37231 505 aaPredicted RBP15.19■□□□□ 0.02
TTC39A-208ENST00000413473 LHX1P48742 406 aa15.19■□□□□ 0.02
TTC39A-208ENST00000413473 CRYBB1P53674 252 aaPredicted RBP15.19■□□□□ 0.02
TTC39A-208ENST00000413473 PKNOX1P55347 436 aa15.19■□□□□ 0.02
TTC39A-208ENST00000413473 MPP1Q00013 466 aa15.19■□□□□ 0.02
TTC39A-208ENST00000413473 PDK3Q15120 406 aa15.19■□□□□ 0.02
TTC39A-208ENST00000413473 CCL15Q16663 113 aa15.19■□□□□ 0.02
TTC39A-208ENST00000413473 OGFRL1Q5TC84 451 aaPredicted RBP15.19■□□□□ 0.02
TTC39A-208ENST00000413473 PM20D1Q6GTS8 502 aa15.19■□□□□ 0.02
TTC39A-208ENST00000413473 PKN3Q6P5Z2 889 aa15.19■□□□□ 0.02
TTC39A-208ENST00000413473 CEP97Q8IW35 865 aa15.19■□□□□ 0.02
TTC39A-208ENST00000413473 CPSF7Q8N684 471 aaKnown RBP15.19■□□□□ 0.02
TTC39A-208ENST00000413473 RNF148Q8N7C7 305 aa15.19■□□□□ 0.02
TTC39A-208ENST00000413473 NXNL1Q96CM4 212 aa15.19■□□□□ 0.02
TTC39A-208ENST00000413473 MS4A4AQ96JQ5 239 aa15.19■□□□□ 0.02
TTC39A-208ENST00000413473 MARK4Q96L34 752 aa15.19■□□□□ 0.02
TTC39A-208ENST00000413473 OMDQ99983 421 aa15.19■□□□□ 0.02
TTC39A-208ENST00000413473 SPATA16Q9BXB7 569 aa15.19■□□□□ 0.02
TTC39A-208ENST00000413473 CDYLQ9Y232 598 aa15.19■□□□□ 0.02
TTC39A-208ENST00000413473 DTNAQ9Y4J8 743 aa15.19■□□□□ 0.02
TTC39A-208ENST00000413473 HHLA1C9JL84 531 aa15.18■□□□□ 0.02
TTC39A-208ENST00000413473 AP3B1O00203 1094 aa15.18■□□□□ 0.02
TTC39A-208ENST00000413473 PGK1P00558 417 aa15.18■□□□□ 0.02
TTC39A-208ENST00000413473 PSEN2P49810 448 aa15.18■□□□□ 0.02
TTC39A-208ENST00000413473 CLCNKBP51801 687 aa15.18■□□□□ 0.02
TTC39A-208ENST00000413473 PRKAA2P54646 552 aa15.18■□□□□ 0.02
TTC39A-208ENST00000413473 PDCD2Q16342 344 aaPredicted RBP15.18■□□□□ 0.02
TTC39A-208ENST00000413473 CNPY1Q3B7I2 92 aa15.18■□□□□ 0.02
TTC39A-208ENST00000413473 PCID2Q5JVF3 399 aa15.18■□□□□ 0.02
TTC39A-208ENST00000413473 LRRC8EQ6NSJ5 796 aa15.18■□□□□ 0.02
TTC39A-208ENST00000413473 ESRP1Q6NXG1 681 aaKnown RBP15.18■□□□□ 0.02
TTC39A-208ENST00000413473 FBXL19Q6PCT2 694 aa15.18■□□□□ 0.02
TTC39A-208ENST00000413473 DCLRE1AQ6PJP8 1040 aa15.18■□□□□ 0.02
TTC39A-208ENST00000413473 BNC2Q6ZN30 1099 aaPredicted RBP15.18■□□□□ 0.02
TTC39A-208ENST00000413473 MFSD6LQ8IWD5 586 aa15.18■□□□□ 0.02
TTC39A-208ENST00000413473 CCNYL1Q8N7R7 359 aa15.18■□□□□ 0.02
TTC39A-208ENST00000413473 IPMKQ8NFU5 416 aa15.18■□□□□ 0.02
TTC39A-208ENST00000413473 USP13Q92995 863 aaPredicted RBP15.18■□□□□ 0.02
TTC39A-208ENST00000413473 CENPKQ9BS16 269 aa15.18■□□□□ 0.02
TTC39A-208ENST00000413473 SIK2Q9H0K1 926 aa15.18■□□□□ 0.02
TTC39A-208ENST00000413473 RRN3Q9NYV6 651 aa15.18■□□□□ 0.02
TTC39A-208ENST00000413473 VTI1BQ9UEU0 232 aa15.18■□□□□ 0.02
TTC39A-208ENST00000413473 GNEQ9Y223 722 aaKnown RBP15.18■□□□□ 0.02
TTC39A-208ENST00000413473 ENO3P13929 434 aaPredicted RBP15.18■□□□□ 0.02
TTC39A-208ENST00000413473 MRPS22P82650 360 aaKnown RBP15.18■□□□□ 0.02
TTC39A-208ENST00000413473 FLOT2Q14254 428 aa15.18■□□□□ 0.02
TTC39A-208ENST00000413473 ZNF423Q2M1K9 1284 aa15.18■□□□□ 0.02
TTC39A-208ENST00000413473 PLEKHH3Q7Z736 793 aa15.18■□□□□ 0.02
TTC39A-208ENST00000413473 TAC4Q86UU9 113 aa15.18■□□□□ 0.02
TTC39A-208ENST00000413473 ARHGAP18Q8N392 663 aa15.18■□□□□ 0.02
TTC39A-208ENST00000413473 ZNF385DQ9H6B1 395 aa15.18■□□□□ 0.02
TTC39A-208ENST00000413473 C6orf203Q9P0P8 240 aaPredicted RBP15.18■□□□□ 0.02
TTC39A-208ENST00000413473 AAR2Q9Y312 384 aaKnown RBP15.18■□□□□ 0.02
TTC39A-208ENST00000413473 PSMD3O43242 534 aa15.17■□□□□ 0.02
TTC39A-208ENST00000413473 PIM1P11309 404 aaPredicted RBP15.17■□□□□ 0.02
TTC39A-208ENST00000413473 GRIA2P42262 883 aa15.17■□□□□ 0.02
TTC39A-208ENST00000413473 MS4A2Q01362 244 aa15.17■□□□□ 0.02
TTC39A-208ENST00000413473 CEACAM7Q14002 265 aa15.17■□□□□ 0.02
TTC39A-208ENST00000413473 GRM2Q14416 872 aa15.17■□□□□ 0.02
TTC39A-208ENST00000413473 PIGGQ5H8A4 983 aa15.17■□□□□ 0.02
TTC39A-208ENST00000413473 TLK2Q86UE8 772 aa15.17■□□□□ 0.02
TTC39A-208ENST00000413473 C3orf58Q8NDZ4 430 aa15.17■□□□□ 0.02
TTC39A-208ENST00000413473 BRI3BPQ8WY22 251 aa15.17■□□□□ 0.02
TTC39A-208ENST00000413473 SGF29Q96ES7 293 aa15.17■□□□□ 0.02
TTC39A-208ENST00000413473 GPR78Q96P69 363 aa15.17■□□□□ 0.02
TTC39A-208ENST00000413473 BTBD9Q96Q07 612 aa15.17■□□□□ 0.02
TTC39A-208ENST00000413473 GAD1Q99259 594 aa15.17■□□□□ 0.02
TTC39A-208ENST00000413473 TBL1YQ9BQ87 522 aa15.17■□□□□ 0.02
TTC39A-208ENST00000413473 MRPL42Q9Y6G3 142 aaKnown RBP15.17■□□□□ 0.02
TTC39A-208ENST00000413473 DOCK3Q8IZD9 2030 aa15.17■□□□□ 0.02
TTC39A-208ENST00000413473 BPTFQ12830 3046 aa15.17■□□□□ 0.02
TTC39A-208ENST00000413473 TMEM233B4DJY2 109 aa15.17■□□□□ 0.02
TTC39A-208ENST00000413473 SLCO1B7G3V0H7 640 aa15.17■□□□□ 0.02
TTC39A-208ENST00000413473 STX16-NPEPL1H3BU86 382 aa15.17■□□□□ 0.02
TTC39A-208ENST00000413473 CACNG3O60359 315 aa15.17■□□□□ 0.02
TTC39A-208ENST00000413473 COL6A2P12110 1019 aa15.17■□□□□ 0.02
TTC39A-208ENST00000413473 DNAJB2P25686 324 aa15.17■□□□□ 0.02
TTC39A-208ENST00000413473 HK2P52789 917 aa15.17■□□□□ 0.02
TTC39A-208ENST00000413473 RAB10P61026 200 aa15.17■□□□□ 0.02
TTC39A-208ENST00000413473 COG7P83436 770 aa15.17■□□□□ 0.02
TTC39A-208ENST00000413473 NSUN2Q08J23 767 aaKnown RBP eCLIP15.17■□□□□ 0.02
TTC39A-208ENST00000413473 UGP2Q16851 508 aa15.17■□□□□ 0.02
TTC39A-208ENST00000413473 C11orf91Q3C1V1 193 aa15.17■□□□□ 0.02
TTC39A-208ENST00000413473 OLFML2BQ68BL8 750 aa15.17■□□□□ 0.02
TTC39A-208ENST00000413473 USP50Q70EL3 339 aaPredicted RBP15.17■□□□□ 0.02
TTC39A-208ENST00000413473 SETD3Q86TU7 594 aaPredicted RBP15.17■□□□□ 0.02
TTC39A-208ENST00000413473 TMEM86AQ8N2M4 240 aa15.17■□□□□ 0.02
TTC39A-208ENST00000413473 ZC3H15Q8WU90 426 aaKnown RBP15.17■□□□□ 0.02
TTC39A-208ENST00000413473 ZNF419Q96HQ0 510 aaPredicted RBP15.17■□□□□ 0.02
TTC39A-208ENST00000413473 ZNF408Q9H9D4 720 aa15.17■□□□□ 0.02
TTC39A-208ENST00000413473 SLC2A6Q9UGQ3 507 aa15.17■□□□□ 0.02
TTC39A-208ENST00000413473 TBC1D30Q9Y2I9 924 aa15.17■□□□□ 0.02
TTC39A-208ENST00000413473 FAM95CA0A1B0GW59 222 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms