RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 WDFY2Q96P53 400 aa5.07□□□□□ -1.6
HMGB3P31-201ENST00000413333 TEFMQ96QE5 360 aaKnown RBP5.07□□□□□ -1.6
HMGB3P31-201ENST00000413333 EFHD1Q9BUP0 239 aa5.07□□□□□ -1.6
HMGB3P31-201ENST00000413333 DUSP26Q9BV47 211 aa5.07□□□□□ -1.6
HMGB3P31-201ENST00000413333 ZNF747Q9BV97 191 aa5.07□□□□□ -1.6
HMGB3P31-201ENST00000413333 NUF2Q9BZD4 464 aa5.07□□□□□ -1.6
HMGB3P31-201ENST00000413333 TOR3AQ9H497 397 aa5.07□□□□□ -1.6
HMGB3P31-201ENST00000413333 ZNF304Q9HCX3 659 aa5.07□□□□□ -1.6
HMGB3P31-201ENST00000413333 ATP8A2Q9NTI2 1148 aa5.07□□□□□ -1.6
HMGB3P31-201ENST00000413333 TLK1Q9UKI8 766 aa5.07□□□□□ -1.6
HMGB3P31-201ENST00000413333 A4GNTQ9UNA3 340 aa5.07□□□□□ -1.6
HMGB3P31-201ENST00000413333 TMEM5Q9Y2B1 443 aa5.07□□□□□ -1.6
HMGB3P31-201ENST00000413333 WNT6Q9Y6F9 365 aa5.07□□□□□ -1.6
HMGB3P31-201ENST00000413333 SLC22A23A1A5C7 686 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 AGAP14A8MT82 685 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 IFNL4K9M1U5 179 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 P4HA2O15460 535 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 LIASO43766 372 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 PLOD3O60568 738 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 DDAH2O95865 285 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 PLAUP00749 431 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 CHRM5P08912 532 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 CYP2A6P11509 494 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 EDN2P20800 178 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 TM4SF1P30408 202 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 GCH1P30793 250 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 HOXA7P31268 230 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 ACSL1P33121 698 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 BLKP51451 505 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 CACNA2D1P54289 1103 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 SOX10P56693 466 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 YWHAZP63104 245 aaKnown RBP5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 CEBPZQ03701 1054 aaKnown RBP5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 ACVR2BQ13705 512 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 PPP2R5BQ15173 497 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 RPE65Q16518 533 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 DPCR1Q3MIW9 517 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 DUSP28Q4G0W2 176 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 TMEM119Q4V9L6 283 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 PRAMEF17Q5VTA0 474 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 ATG9BQ674R7 924 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 NCEH1Q6PIU2 408 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 ARHGEF25Q86VW2 580 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 POMGNT1Q8WZA1 660 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 KAT2AQ92830 837 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 CMTM3Q96MX0 182 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 FRG2BQ96QU4 278 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 YME1L1Q96TA2 773 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 TIMP4Q99727 224 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 SLF1Q9BQI6 1058 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 HIPK3Q9H422 1215 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 POLR1BQ9H9Y6 1135 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 PLSCR4Q9NRQ2 329 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 GRHL1Q9NZI5 618 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 SLCO3A1Q9UIG8 710 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 CDH22Q9UJ99 828 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 INTS6Q9UL03 887 aaKnown RBP5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 SNX8Q9Y5X2 465 aa5.06□□□□□ -1.6
HMGB3P31-201ENST00000413333 TTC36A6NLP5 189 aa5.05□□□□□ -1.6
HMGB3P31-201ENST00000413333 BEST1O76090 585 aa5.05□□□□□ -1.6
HMGB3P31-201ENST00000413333 ZNF8P17098 575 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P31-201ENST00000413333 CIITAP33076 1130 aa5.05□□□□□ -1.6
HMGB3P31-201ENST00000413333 GARSP41250 739 aaKnown RBP5.05□□□□□ -1.6
HMGB3P31-201ENST00000413333 CRYMQ14894 314 aa5.05□□□□□ -1.6
HMGB3P31-201ENST00000413333 KIAA1755Q5JYT7 1200 aa5.05□□□□□ -1.6
HMGB3P31-201ENST00000413333 VWA5B1Q5TIE3 1220 aa5.05□□□□□ -1.6
HMGB3P31-201ENST00000413333 SUMO4Q6EEV6 95 aa5.05□□□□□ -1.6
HMGB3P31-201ENST00000413333 PDXDC1Q6P996 788 aa5.05□□□□□ -1.6
HMGB3P31-201ENST00000413333 TSSK4Q6SA08 328 aa5.05□□□□□ -1.6
HMGB3P31-201ENST00000413333 WDR5BQ86VZ2 330 aa5.05□□□□□ -1.6
HMGB3P31-201ENST00000413333 OSR1Q8TAX0 266 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P31-201ENST00000413333 GTF3C6Q969F1 213 aa5.05□□□□□ -1.6
HMGB3P31-201ENST00000413333 FAM149B1Q96BN6 582 aa5.05□□□□□ -1.6
HMGB3P31-201ENST00000413333 ASB2Q96Q27 587 aa5.05□□□□□ -1.6
HMGB3P31-201ENST00000413333 GLIS2Q9BZE0 524 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P31-201ENST00000413333 SH2D4AQ9H788 454 aa5.05□□□□□ -1.6
HMGB3P31-201ENST00000413333 SCPEP1Q9HB40 452 aa5.05□□□□□ -1.6
HMGB3P31-201ENST00000413333 MOV10Q9HCE1 1003 aaKnown RBP5.05□□□□□ -1.6
HMGB3P31-201ENST00000413333 FBRSL1Q9HCM7 1045 aaKnown RBP5.05□□□□□ -1.6
HMGB3P31-201ENST00000413333 PACSIN3Q9UKS6 424 aa5.05□□□□□ -1.6
HMGB3P31-201ENST00000413333 ADAM18Q9Y3Q7 739 aa5.05□□□□□ -1.6
HMGB3P31-201ENST00000413333 CLDN16Q9Y5I7 305 aa5.05□□□□□ -1.6
HMGB3P31-201ENST00000413333 DPPA5A6NC42 116 aa5.04□□□□□ -1.6
HMGB3P31-201ENST00000413333 BTBD18B2RXH4 712 aa5.04□□□□□ -1.6
HMGB3P31-201ENST00000413333 BCAT2O15382 392 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P31-201ENST00000413333 PAGE4O60829 102 aa5.04□□□□□ -1.6
HMGB3P31-201ENST00000413333 GCP02774 474 aa5.04□□□□□ -1.6
HMGB3P31-201ENST00000413333 DNTTP04053 509 aa5.04□□□□□ -1.6
HMGB3P31-201ENST00000413333 CLTBP09497 229 aa5.04□□□□□ -1.6
HMGB3P31-201ENST00000413333 IRF1P10914 325 aa5.04□□□□□ -1.6
HMGB3P31-201ENST00000413333 KRT10P13645 584 aa5.04□□□□□ -1.6
HMGB3P31-201ENST00000413333 TFEBP19484 476 aa5.04□□□□□ -1.6
HMGB3P31-201ENST00000413333 IFI35P80217 286 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P31-201ENST00000413333 LRMPQ12912 555 aa5.04□□□□□ -1.6
HMGB3P31-201ENST00000413333 STK4Q13043 487 aa5.04□□□□□ -1.6
HMGB3P31-201ENST00000413333 RUNX2Q13950 521 aa5.04□□□□□ -1.6
HMGB3P31-201ENST00000413333 BECN1Q14457 450 aa5.04□□□□□ -1.6
HMGB3P31-201ENST00000413333 LRIG3Q6UXM1 1119 aa5.04□□□□□ -1.6
HMGB3P31-201ENST00000413333 Q6ZPA2 131 aa5.04□□□□□ -1.6
HMGB3P31-201ENST00000413333 GSTA5Q7RTV2 222 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms