RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 LRRC38Q5VT99 294 aa7.85□□□□□ -1.15
CPSF4-202ENST00000412686 KAZNQ674X7 775 aa7.85□□□□□ -1.15
CPSF4-202ENST00000412686 AADACL2Q6P093 401 aa7.85□□□□□ -1.15
CPSF4-202ENST00000412686 NPNTQ6UXI9 565 aa7.85□□□□□ -1.15
CPSF4-202ENST00000412686 B4GALNT4Q76KP1 1039 aa7.85□□□□□ -1.15
CPSF4-202ENST00000412686 ALYREFQ86V81 257 aaKnown RBP7.85□□□□□ -1.15
CPSF4-202ENST00000412686 SLC41A1Q8IVJ1 513 aa7.85□□□□□ -1.15
CPSF4-202ENST00000412686 RYBPQ8N488 228 aaPredicted RBP7.85□□□□□ -1.15
CPSF4-202ENST00000412686 HDDC3Q8N4P3 179 aa7.85□□□□□ -1.15
CPSF4-202ENST00000412686 PCDH20Q8N6Y1 951 aaKnown RBP7.85□□□□□ -1.15
CPSF4-202ENST00000412686 PLD5Q8N7P1 536 aa7.85□□□□□ -1.15
CPSF4-202ENST00000412686 CCDC112Q8NEF3 446 aa7.85□□□□□ -1.15
CPSF4-202ENST00000412686 PIP4K2CQ8TBX8 421 aa7.85□□□□□ -1.15
CPSF4-202ENST00000412686 GANCQ8TET4 914 aa7.85□□□□□ -1.15
CPSF4-202ENST00000412686 ARRDC3Q96B67 414 aa7.85□□□□□ -1.15
CPSF4-202ENST00000412686 ZNF419Q96HQ0 510 aaPredicted RBP7.85□□□□□ -1.15
CPSF4-202ENST00000412686 SPACA7Q96KW9 195 aa7.85□□□□□ -1.15
CPSF4-202ENST00000412686 NSMCE3Q96MG7 304 aa7.85□□□□□ -1.15
CPSF4-202ENST00000412686 RNF157Q96PX1 679 aa7.85□□□□□ -1.15
CPSF4-202ENST00000412686 HERPUD2Q9BSE4 406 aa7.85□□□□□ -1.15
CPSF4-202ENST00000412686 GPR174Q9BXC1 333 aa7.85□□□□□ -1.15
CPSF4-202ENST00000412686 NEUROG2Q9H2A3 272 aa7.85□□□□□ -1.15
CPSF4-202ENST00000412686 SMOC1Q9H4F8 434 aa7.85□□□□□ -1.15
CPSF4-202ENST00000412686 FBXL12Q9NXK8 326 aa7.85□□□□□ -1.15
CPSF4-202ENST00000412686 RCOR3Q9P2K3 495 aaPredicted RBP7.85□□□□□ -1.15
CPSF4-202ENST00000412686 EVLQ9UI08 416 aaPredicted RBP7.85□□□□□ -1.15
CPSF4-202ENST00000412686 IPO11Q9UI26 975 aaKnown RBP7.85□□□□□ -1.15
CPSF4-202ENST00000412686 PPM1HQ9ULR3 514 aa7.85□□□□□ -1.15
CPSF4-202ENST00000412686 SLCO1B1Q9Y6L6 691 aa7.85□□□□□ -1.15
CPSF4-202ENST00000412686 WASF2Q9Y6W5 498 aa7.85□□□□□ -1.15
CPSF4-202ENST00000412686 USP34Q70CQ2 3546 aa7.85□□□□□ -1.15
CPSF4-202ENST00000412686 ANKRD36A6QL64 1941 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 PLXNA2O75051 1894 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 ZSCAN5CA6NGD5 496 aaPredicted RBP7.84□□□□□ -1.15
CPSF4-202ENST00000412686 FAM47DPA6NHR8 397 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 KPNA3O00505 521 aaPredicted RBP7.84□□□□□ -1.15
CPSF4-202ENST00000412686 PSTPIP1O43586 416 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 MAFKO60675 156 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 ZNF217O75362 1048 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 LEFTY1O75610 366 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 RNASEH2AO75792 299 aaKnown RBP7.84□□□□□ -1.15
CPSF4-202ENST00000412686 IGLV3-19P01714 112 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 PECAM1P16284 738 aaPredicted RBP7.84□□□□□ -1.15
CPSF4-202ENST00000412686 CDKN2BP42772 138 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 RECQLP46063 649 aaPredicted RBP7.84□□□□□ -1.15
CPSF4-202ENST00000412686 DHPSP49366 369 aaPredicted RBP7.84□□□□□ -1.15
CPSF4-202ENST00000412686 MAXP61244 160 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 RHOAP61586 193 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 CREB5Q02930 508 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 IL10RBQ08334 325 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 SLC20A2Q08357 652 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 SLC10A7Q0GE19 358 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 SPEM2Q0P670 501 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 GALNT2Q10471 571 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 CNTN1Q12860 1018 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 TTC31Q49AM3 519 aaPredicted RBP7.84□□□□□ -1.15
CPSF4-202ENST00000412686 LRRC73Q5JTD7 316 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 SLC9A4Q6AI14 798 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.84□□□□□ -1.15
CPSF4-202ENST00000412686 SPOCD1Q6ZMY3 1216 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 METTL3Q86U44 580 aaKnown RBP7.84□□□□□ -1.15
CPSF4-202ENST00000412686 NT5DC3Q86UY8 548 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 RFX6Q8HWS3 928 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 MAP7D3Q8IWC1 876 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 PGBD5Q8N414 524 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 ATPAF2Q8N5M1 289 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 LZTR1Q8N653 840 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 TSEN2Q8NCE0 465 aaKnown RBP7.84□□□□□ -1.15
CPSF4-202ENST00000412686 OR2AP1Q8NGE2 309 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 KIAA1524Q8TCG1 905 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 ALG3Q92685 438 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 HAUS1Q96CS2 278 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 ZC3H10Q96K80 434 aaKnown RBP7.84□□□□□ -1.15
CPSF4-202ENST00000412686 HSPA12BQ96MM6 686 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 OMDQ99983 421 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 CEP44Q9C0F1 390 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 ARRDC1-AS1Q9H2J1 176 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 C6orf106Q9H6K1 298 aaPredicted RBP7.84□□□□□ -1.15
CPSF4-202ENST00000412686 ZDHHC6Q9H6R6 413 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 FBRSQ9HAH7 460 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 PARD6AQ9NPB6 346 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 LZTFL1Q9NQ48 299 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 TMEM74BQ9NUR3 256 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 DDX56Q9NY93 547 aaKnown RBP7.84□□□□□ -1.15
CPSF4-202ENST00000412686 WSB2Q9NYS7 404 aaPredicted RBP7.84□□□□□ -1.15
CPSF4-202ENST00000412686 DTLQ9NZJ0 730 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 NCDNQ9UBB6 729 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 SAE1Q9UBE0 346 aaPredicted RBP7.84□□□□□ -1.15
CPSF4-202ENST00000412686 HECAQ9UBI9 543 aaPredicted RBP7.84□□□□□ -1.15
CPSF4-202ENST00000412686 IL36AQ9UHA7 158 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 RAB23Q9ULC3 237 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 GUCA1BQ9UMX6 200 aa7.84□□□□□ -1.15
CPSF4-202ENST00000412686 SPAG17Q6Q759 2223 aa7.83□□□□□ -1.16
CPSF4-202ENST00000412686 hCG_1818297A0A087WSY0 165 aa7.83□□□□□ -1.16
CPSF4-202ENST00000412686 PATE3B3GLJ2 98 aa7.83□□□□□ -1.16
CPSF4-202ENST00000412686 C1QTNF3-AMACRE9PGA6 284 aa7.83□□□□□ -1.16
CPSF4-202ENST00000412686 KRIT1O00522 736 aa7.83□□□□□ -1.16
CPSF4-202ENST00000412686 APOL1O14791 398 aa7.83□□□□□ -1.16
CPSF4-202ENST00000412686 ALOX15BO15296 676 aa7.83□□□□□ -1.16
CPSF4-202ENST00000412686 DDX3YO15523 660 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms