RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 MAPRE1Q15691 268 aaKnown RBP2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 BTBD16Q32M84 506 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 ZNF672Q499Z4 452 aaPredicted RBP2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 AASDHQ4L235 1098 aaPredicted RBP2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 C20orf194Q5TEA3 1177 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 ISM2Q6H9L7 571 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 CCDC144NLQ6NUI1 221 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 Q6ZTK2 550 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 RRAGAQ7L523 313 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 C16orf82Q7Z2V1 217 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 CTU1Q7Z7A3 348 aaKnown RBP2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 TMTC1Q8IUR5 882 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 CPOQ8IVL8 374 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 OR4N4Q8N0Y3 316 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 TMEM57Q8N5G2 664 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 ARL14EPQ8N8R7 260 aaPredicted RBP2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 DBF4BQ8NFT6 615 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 AFG1LQ8WV93 481 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 ASB12Q8WXK4 309 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 ANKRD7Q92527 254 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 ANP32BQ92688 251 aaKnown RBP2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 C3orf49Q96BT1 292 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 TRIM44Q96DX7 344 aaPredicted RBP2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 MPP4Q96JB8 637 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 EIF3CQ99613 913 aaKnown RBP2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 EIF2AK1Q9BQI3 630 aaKnown RBP2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 BRD8Q9H0E9 1235 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 KCNK9Q9NPC2 374 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 WASH6PQ9NQA3 447 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 LIN7CQ9NUP9 197 aaKnown RBP2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 TMLHEQ9NVH6 421 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 PNMA2Q9UL42 364 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 ZBTB1Q9Y2K1 713 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 CRYL1Q9Y2S2 319 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 TMEM98Q9Y2Y6 226 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 UBE2J1Q9Y385 318 aaPredicted RBP2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 PTGDR2Q9Y5Y4 395 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 PARD3Q8TEW0 1356 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 ANKRD30BQ9BXX2 1392 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 NPC1L1Q9UHC9 1359 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 NINLQ9Y2I6 1382 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 RPRD2Q5VT52 1461 aaKnown RBP2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 CTTNBP2Q8WZ74 1663 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 HECW1Q76N89 1606 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 CUX1P39880 1505 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 MAPK8IP3Q9UPT6 1336 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 KIF15Q9NS87 1388 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 A0A1B0GVT2 93 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 PLSCR5A0PG75 271 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 PRR23AA6NEV1 266 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 FAM90A20PA6NIJ5 464 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 SLC38A8A6NNN8 435 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 VGLL3A8MV65 326 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 KIF28PB7ZC32 967 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 J3KRW8 73 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 CLGNO14967 610 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 EPB41L2O43491 1005 aaKnown RBP2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 ZBTB11O95625 1053 aaPredicted RBP2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 MBPP02686 304 aaPredicted RBP2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 POLBP06746 335 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 SP1P08047 785 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 CNPP09543 421 aaKnown RBP2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 CAPN2P17655 700 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 DRD1P21728 446 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 CNTFP26441 200 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 HOXD3P31249 432 aaPredicted RBP2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 SOX2P48431 317 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 PDLIM4P50479 330 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 UBE3AQ05086 875 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 SF3A3Q12874 501 aaKnown RBP eCLIP2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 DNASE1L3Q13609 305 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 SYCP1Q15431 976 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 P3H1Q32P28 736 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 GALNTL6Q49A17 601 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 KIAA1755Q5JYT7 1200 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 ZNF569Q5MCW4 686 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 MAP3K21Q5TCX8 1036 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 LIPMQ5VYY2 423 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 C9orf57Q5W0N0 161 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 DGAT2L7PQ6IED9 249 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 GRHL2Q6ISB3 625 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 TMED8Q6PL24 325 aaPredicted RBP2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 PARM1Q6UWI2 310 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 BBS12Q6ZW61 710 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 RASGRP2Q7LDG7 609 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 ARMC9Q7Z3E5 817 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 KRT27Q7Z3Y8 459 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 USP38Q8NB14 1042 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 CSGALNACT1Q8TDX6 532 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 SLC22A17Q8WUG5 538 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 HMGB4Q8WW32 186 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 GOLGA1Q92805 767 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 SNX21Q969T3 373 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 MCRS1Q96EZ8 462 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 REXO5Q96IC2 774 aaKnown RBP2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 MAELQ96JY0 434 aaKnown RBP2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 COG8Q96MW5 612 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 TWNKQ96RR1 684 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms