RNA–Protein interactions for RNA: ENST00000411809.6

CLINT1-201, Transcript of clathrin interactor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLINT1, Length 3,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-201ENST00000411809 GRIN3AQ8TCU5 1115 aa13.23□□□□□ -0.29
CLINT1-201ENST00000411809 TMA16Q96EY4 203 aaKnown RBP13.23□□□□□ -0.29
CLINT1-201ENST00000411809 PCED1BQ96HM7 432 aa13.23□□□□□ -0.29
CLINT1-201ENST00000411809 TMEM165Q9HC07 324 aa13.23□□□□□ -0.29
CLINT1-201ENST00000411809 CACNG4Q9UBN1 327 aa13.23□□□□□ -0.29
CLINT1-201ENST00000411809 TMCO1Q9UM00 188 aa13.23□□□□□ -0.29
CLINT1-201ENST00000411809 TBC1D30Q9Y2I9 924 aa13.23□□□□□ -0.29
CLINT1-201ENST00000411809 TDRKHQ9Y2W6 561 aaKnown RBP13.23□□□□□ -0.29
CLINT1-201ENST00000411809 FIS1Q9Y3D6 152 aa13.23□□□□□ -0.29
CLINT1-201ENST00000411809 SHROOM3Q8TF72 1996 aa13.23□□□□□ -0.29
CLINT1-201ENST00000411809 CYP11A1P05108 521 aa13.23□□□□□ -0.29
CLINT1-201ENST00000411809 CHRNGP07510 517 aa13.23□□□□□ -0.29
CLINT1-201ENST00000411809 HNRNPCP07910 306 aaKnown RBP eCLIP13.23□□□□□ -0.29
CLINT1-201ENST00000411809 CPA3P15088 417 aa13.23□□□□□ -0.29
CLINT1-201ENST00000411809 PGAM1P18669 254 aa13.23□□□□□ -0.29
CLINT1-201ENST00000411809 CDKL1Q00532 357 aa13.23□□□□□ -0.29
CLINT1-201ENST00000411809 DCAF6Q58WW2 860 aa13.23□□□□□ -0.29
CLINT1-201ENST00000411809 INTS6LQ5JSJ4 861 aaKnown RBP13.23□□□□□ -0.29
CLINT1-201ENST00000411809 NAPRTQ6XQN6 538 aa13.23□□□□□ -0.29
CLINT1-201ENST00000411809 AGMOQ6ZNB7 445 aa13.23□□□□□ -0.29
CLINT1-201ENST00000411809 FAM35AQ86V20 835 aa13.23□□□□□ -0.29
CLINT1-201ENST00000411809 SLC7A14Q8TBB6 771 aa13.23□□□□□ -0.29
CLINT1-201ENST00000411809 CCDC28BQ9BUN5 200 aa13.23□□□□□ -0.29
CLINT1-201ENST00000411809 TSPYL2Q9H2G4 693 aaPredicted RBP13.23□□□□□ -0.29
CLINT1-201ENST00000411809 ZNF408Q9H9D4 720 aa13.23□□□□□ -0.29
CLINT1-201ENST00000411809 CNGB3Q9NQW8 809 aa13.23□□□□□ -0.29
CLINT1-201ENST00000411809 CHST12Q9NRB3 414 aa13.23□□□□□ -0.29
CLINT1-201ENST00000411809 COPG2Q9UBF2 871 aa13.23□□□□□ -0.29
CLINT1-201ENST00000411809 GLRA3O75311 464 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 PTPN3P26045 913 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 SOX11P35716 441 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 MYBPC1Q00872 1141 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 FSCN1Q16658 493 aaKnown RBP13.22□□□□□ -0.29
CLINT1-201ENST00000411809 TAF2Q6P1X5 1199 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 FCRL3Q96P31 734 aaPredicted RBP13.22□□□□□ -0.29
CLINT1-201ENST00000411809 KCNK16Q96T55 309 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 GREB1Q4ZG55 1949 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 INPPL1O15357 1258 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 CXCR3P49682 368 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 CLCNKBP51801 687 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 HPCAP84074 193 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 MS4A2Q01362 244 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 GALNT2Q10471 571 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 RARS2Q5T160 578 aaKnown RBP13.22□□□□□ -0.29
CLINT1-201ENST00000411809 BEND5Q7L4P6 421 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 TMEM135Q86UB9 458 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 TMIGD2Q96BF3 282 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 RCN3Q96D15 328 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 SENP8Q96LD8 212 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 APBA2Q99767 749 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 NUF2Q9BZD4 464 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 PRDM12Q9H4Q4 367 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 CASS4Q9NQ75 786 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 FAM105AQ9NUU6 356 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 PTCH2Q9Y6C5 1203 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 ZCWPW2A0A1B0GU75 182 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 MYBPHLA2RUH7 354 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 RPL10P27635 214 aaKnown RBP13.22□□□□□ -0.29
CLINT1-201ENST00000411809 PSMB4P28070 264 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 ARL4AP40617 200 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 GLRBP48167 497 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 TKTL1P51854 596 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 MTTPP55157 894 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 ADARP55265 1226 aaKnown RBP13.22□□□□□ -0.29
CLINT1-201ENST00000411809 IRF9Q00978 393 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 DSC3Q14574 896 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 SERINC5Q86VE9 423 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 SPNS2Q8IVW8 549 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 LILRA2Q8N149 483 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 CDKL2Q92772 493 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 HDAC11Q96DB2 347 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 HSPBAP1Q96EW2 488 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 CATSPER2Q96P56 530 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 PKP2Q99959 881 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 PTTG2Q9NZH5 202 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 PSMD13Q9UNM6 376 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 SORCS3Q9UPU3 1222 aa13.22□□□□□ -0.29
CLINT1-201ENST00000411809 M0QYT0 321 aa13.21□□□□□ -0.29
CLINT1-201ENST00000411809 ZNF189O75820 626 aaPredicted RBP13.21□□□□□ -0.29
CLINT1-201ENST00000411809 CDK4P11802 303 aa13.21□□□□□ -0.29
CLINT1-201ENST00000411809 ALOX15P16050 662 aaPredicted RBP13.21□□□□□ -0.29
CLINT1-201ENST00000411809 HOXC13P31276 330 aa13.21□□□□□ -0.29
CLINT1-201ENST00000411809 RABGGTBP53611 331 aa13.21□□□□□ -0.29
CLINT1-201ENST00000411809 MAP3K7CLP57077 242 aa13.21□□□□□ -0.29
CLINT1-201ENST00000411809 CCNYQ8ND76 341 aa13.21□□□□□ -0.29
CLINT1-201ENST00000411809 ZNF419Q96HQ0 510 aaPredicted RBP13.21□□□□□ -0.29
CLINT1-201ENST00000411809 MLPHQ9BV36 600 aaPredicted RBP13.21□□□□□ -0.29
CLINT1-201ENST00000411809 ULBP1Q9BZM6 244 aa13.21□□□□□ -0.29
CLINT1-201ENST00000411809 DNAI2Q9GZS0 605 aa13.21□□□□□ -0.29
CLINT1-201ENST00000411809 Q9H521 79 aa13.21□□□□□ -0.29
CLINT1-201ENST00000411809 SYBUQ9NX95 663 aa13.21□□□□□ -0.29
CLINT1-201ENST00000411809 DOCK4Q8N1I0 1966 aa13.21□□□□□ -0.29
CLINT1-201ENST00000411809 ARL5CA6NH57 179 aa13.21□□□□□ -0.3
CLINT1-201ENST00000411809 LTFP02788 710 aa13.21□□□□□ -0.3
CLINT1-201ENST00000411809 MYL3P08590 195 aa13.21□□□□□ -0.3
CLINT1-201ENST00000411809 CYBAP13498 195 aa13.21□□□□□ -0.3
CLINT1-201ENST00000411809 CYP2B6P20813 491 aa13.21□□□□□ -0.3
CLINT1-201ENST00000411809 MPSTP25325 297 aa13.21□□□□□ -0.3
CLINT1-201ENST00000411809 LHX1P48742 406 aa13.21□□□□□ -0.3
CLINT1-201ENST00000411809 OGFRL1Q5TC84 451 aaPredicted RBP13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms