RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 KIAA0930Q6ICG6 404 aaPredicted RBP13.78□□□□□ -0.2
LIMS1-205ENST00000410093 FSTL4Q6MZW2 842 aa13.78□□□□□ -0.2
LIMS1-205ENST00000410093 PSRC1Q6PGN9 363 aaPredicted RBP13.78□□□□□ -0.2
LIMS1-205ENST00000410093 RANBP10Q6VN20 620 aa13.78□□□□□ -0.2
LIMS1-205ENST00000410093 CEP57Q86XR8 500 aa13.78□□□□□ -0.2
LIMS1-205ENST00000410093 DCLK2Q8N568 766 aa13.78□□□□□ -0.2
LIMS1-205ENST00000410093 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.78□□□□□ -0.2
LIMS1-205ENST00000410093 STON2Q8WXE9 905 aa13.78□□□□□ -0.2
LIMS1-205ENST00000410093 GPR22Q99680 433 aa13.78□□□□□ -0.2
LIMS1-205ENST00000410093 KCNK13Q9HB14 408 aa13.78□□□□□ -0.2
LIMS1-205ENST00000410093 SNX15Q9NRS6 342 aa13.78□□□□□ -0.2
LIMS1-205ENST00000410093 MARCH5Q9NX47 278 aa13.78□□□□□ -0.2
LIMS1-205ENST00000410093 HEY2Q9UBP5 337 aa13.78□□□□□ -0.2
LIMS1-205ENST00000410093 TCAF1Q9Y4C2 921 aa13.78□□□□□ -0.2
LIMS1-205ENST00000410093 HEATR9A2RTY3 570 aa13.77□□□□□ -0.21
LIMS1-205ENST00000410093 F5H423 210 aaPredicted RBP13.77□□□□□ -0.21
LIMS1-205ENST00000410093 USP12O75317 370 aa13.77□□□□□ -0.21
LIMS1-205ENST00000410093 PPP3CCP48454 512 aa13.77□□□□□ -0.21
LIMS1-205ENST00000410093 SLC11A1P49279 550 aa13.77□□□□□ -0.21
LIMS1-205ENST00000410093 CCL23P55773 120 aa13.77□□□□□ -0.21
LIMS1-205ENST00000410093 EFEMP1Q12805 493 aa13.77□□□□□ -0.21
LIMS1-205ENST00000410093 SF3A3Q12874 501 aaKnown RBP eCLIP13.77□□□□□ -0.21
LIMS1-205ENST00000410093 TAF10Q12962 218 aa13.77□□□□□ -0.21
LIMS1-205ENST00000410093 TAF1BQ53T94 588 aaPredicted RBP13.77□□□□□ -0.21
LIMS1-205ENST00000410093 HSP90AA5PQ58FG0 334 aa13.77□□□□□ -0.21
LIMS1-205ENST00000410093 ZNF697Q5TEC3 545 aa13.77□□□□□ -0.21
LIMS1-205ENST00000410093 MBLAC2Q68D91 279 aa13.77□□□□□ -0.21
LIMS1-205ENST00000410093 SLC8B1Q6J4K2 584 aa13.77□□□□□ -0.21
LIMS1-205ENST00000410093 OTOP3Q7RTS5 596 aa13.77□□□□□ -0.21
LIMS1-205ENST00000410093 CLEC14AQ86T13 490 aa13.77□□□□□ -0.21
LIMS1-205ENST00000410093 MTDHQ86UE4 582 aaKnown RBP13.77□□□□□ -0.21
LIMS1-205ENST00000410093 UNC5BQ8IZJ1 945 aa13.77□□□□□ -0.21
LIMS1-205ENST00000410093 BBS5Q8N3I7 341 aa13.77□□□□□ -0.21
LIMS1-205ENST00000410093 NETO2Q8NC67 525 aa13.77□□□□□ -0.21
LIMS1-205ENST00000410093 RFWD2Q8NHY2 731 aa13.77□□□□□ -0.21
LIMS1-205ENST00000410093 PIWIL2Q8TC59 973 aaKnown RBP13.77□□□□□ -0.21
LIMS1-205ENST00000410093 IMP4Q96G21 291 aaKnown RBP13.77□□□□□ -0.21
LIMS1-205ENST00000410093 NSL1Q96IY1 281 aa13.77□□□□□ -0.21
LIMS1-205ENST00000410093 TRIM56Q9BRZ2 755 aaKnown RBP13.77□□□□□ -0.21
LIMS1-205ENST00000410093 GPR62Q9BZJ7 368 aa13.77□□□□□ -0.21
LIMS1-205ENST00000410093 TLE6Q9H808 572 aa13.77□□□□□ -0.21
LIMS1-205ENST00000410093 SP110Q9HB58 689 aa13.77□□□□□ -0.21
LIMS1-205ENST00000410093 CHRAC1Q9NRG0 131 aa13.77□□□□□ -0.21
LIMS1-205ENST00000410093 COPG2Q9UBF2 871 aa13.77□□□□□ -0.21
LIMS1-205ENST00000410093 GGT7Q9UJ14 662 aa13.77□□□□□ -0.21
LIMS1-205ENST00000410093 DCTN4Q9UJW0 460 aa13.77□□□□□ -0.21
LIMS1-205ENST00000410093 TLK1Q9UKI8 766 aa13.77□□□□□ -0.21
LIMS1-205ENST00000410093 MAFFQ9ULX9 164 aa13.77□□□□□ -0.21
LIMS1-205ENST00000410093 MOCS2O96007 188 aaPredicted RBP13.76□□□□□ -0.21
LIMS1-205ENST00000410093 EPOP01588 193 aa13.76□□□□□ -0.21
LIMS1-205ENST00000410093 HLA-DQB2P05538 268 aa13.76□□□□□ -0.21
LIMS1-205ENST00000410093 MYL2P10916 166 aa13.76□□□□□ -0.21
LIMS1-205ENST00000410093 CPA3P15088 417 aa13.76□□□□□ -0.21
LIMS1-205ENST00000410093 CRABP2P29373 138 aa13.76□□□□□ -0.21
LIMS1-205ENST00000410093 PBX3P40426 434 aa13.76□□□□□ -0.21
LIMS1-205ENST00000410093 CSRP3P50461 194 aa13.76□□□□□ -0.21
LIMS1-205ENST00000410093 SMAD3P84022 425 aaKnown RBP13.76□□□□□ -0.21
LIMS1-205ENST00000410093 TSNAXIP1Q2TAA8 658 aa13.76□□□□□ -0.21
LIMS1-205ENST00000410093 USP41Q3LFD5 358 aa13.76□□□□□ -0.21
LIMS1-205ENST00000410093 MGAT5BQ3V5L5 792 aa13.76□□□□□ -0.21
LIMS1-205ENST00000410093 C10orf120Q5SQS8 335 aa13.76□□□□□ -0.21
LIMS1-205ENST00000410093 C14orf80Q86SX3 495 aa13.76□□□□□ -0.21
LIMS1-205ENST00000410093 ARHGAP24Q8N264 748 aa13.76□□□□□ -0.21
LIMS1-205ENST00000410093 ATAD1Q8NBU5 361 aa13.76□□□□□ -0.21
LIMS1-205ENST00000410093 IPMKQ8NFU5 416 aa13.76□□□□□ -0.21
LIMS1-205ENST00000410093 SCG3Q8WXD2 468 aaKnown RBP13.76□□□□□ -0.21
LIMS1-205ENST00000410093 MFSD3Q96ES6 412 aa13.76□□□□□ -0.21
LIMS1-205ENST00000410093 VPS39Q96JC1 886 aa13.76□□□□□ -0.21
LIMS1-205ENST00000410093 C12orf65Q9H3J6 166 aaKnown RBP13.76□□□□□ -0.21
LIMS1-205ENST00000410093 ATP13A1Q9HD20 1204 aa13.76□□□□□ -0.21
LIMS1-205ENST00000410093 ALG13Q9NP73 1137 aaKnown RBP13.76□□□□□ -0.21
LIMS1-205ENST00000410093 IL23AQ9NPF7 189 aa13.76□□□□□ -0.21
LIMS1-205ENST00000410093 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.76□□□□□ -0.21
LIMS1-205ENST00000410093 EMCNQ9ULC0 261 aa13.76□□□□□ -0.21
LIMS1-205ENST00000410093 PSAT1Q9Y617 370 aa13.76□□□□□ -0.21
LIMS1-205ENST00000410093 SZT2Q5T011 3432 aa13.75□□□□□ -0.21
LIMS1-205ENST00000410093 A0A096LPK6 155 aa13.75□□□□□ -0.21
LIMS1-205ENST00000410093 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.75□□□□□ -0.21
LIMS1-205ENST00000410093 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.75□□□□□ -0.21
LIMS1-205ENST00000410093 RAMP2O60895 175 aa13.75□□□□□ -0.21
LIMS1-205ENST00000410093 ATP6V1G2O95670 118 aa13.75□□□□□ -0.21
LIMS1-205ENST00000410093 GSRP00390 522 aa13.75□□□□□ -0.21
LIMS1-205ENST00000410093 FGBP02675 491 aa13.75□□□□□ -0.21
LIMS1-205ENST00000410093 ACRP10323 421 aa13.75□□□□□ -0.21
LIMS1-205ENST00000410093 HOXB8P17481 243 aaPredicted RBP13.75□□□□□ -0.21
LIMS1-205ENST00000410093 CES1P23141 567 aa13.75□□□□□ -0.21
LIMS1-205ENST00000410093 CCND1P24385 295 aa13.75□□□□□ -0.21
LIMS1-205ENST00000410093 SLC1A6P48664 564 aa13.75□□□□□ -0.21
LIMS1-205ENST00000410093 ALDH7A1P49419 539 aaKnown RBP13.75□□□□□ -0.21
LIMS1-205ENST00000410093 HARS2P49590 506 aaKnown RBP13.75□□□□□ -0.21
LIMS1-205ENST00000410093 USP46P62068 366 aa13.75□□□□□ -0.21
LIMS1-205ENST00000410093 OVGP1Q12889 678 aa13.75□□□□□ -0.21
LIMS1-205ENST00000410093 SLC12A1Q13621 1099 aa13.75□□□□□ -0.21
LIMS1-205ENST00000410093 THOC5Q13769 683 aaKnown RBP13.75□□□□□ -0.21
LIMS1-205ENST00000410093 GPNMBQ14956 572 aa13.75□□□□□ -0.21
LIMS1-205ENST00000410093 CTC1Q2NKJ3 1217 aa13.75□□□□□ -0.21
LIMS1-205ENST00000410093 TPGS2Q68CL5 300 aa13.75□□□□□ -0.21
LIMS1-205ENST00000410093 DENND5AQ6IQ26 1287 aa13.75□□□□□ -0.21
LIMS1-205ENST00000410093 ZC3HC1Q86WB0 502 aaKnown RBP13.75□□□□□ -0.21
LIMS1-205ENST00000410093 MRGPRX2Q96LB1 330 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms