RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 MAK16Q9BXY0 300 aaKnown RBP11.1□□□□□ -0.63
CHMP3-205ENST00000409810 TM6SF2Q9BZW4 377 aa11.1□□□□□ -0.63
CHMP3-205ENST00000409810 KLC2Q9H0B6 622 aa11.1□□□□□ -0.63
CHMP3-205ENST00000409810 ARRDC1-AS1Q9H2J1 176 aa11.1□□□□□ -0.63
CHMP3-205ENST00000409810 TNKS2Q9H2K2 1166 aa11.1□□□□□ -0.63
CHMP3-205ENST00000409810 VPS45Q9NRW7 570 aa11.1□□□□□ -0.63
CHMP3-205ENST00000409810 KLHL11Q9NVR0 708 aa11.1□□□□□ -0.63
CHMP3-205ENST00000409810 HECAQ9UBI9 543 aaPredicted RBP11.1□□□□□ -0.63
CHMP3-205ENST00000409810 SUSD2Q9UGT4 822 aa11.1□□□□□ -0.63
CHMP3-205ENST00000409810 PPM1HQ9ULR3 514 aa11.1□□□□□ -0.63
CHMP3-205ENST00000409810 TPX2Q9ULW0 747 aaKnown RBP11.1□□□□□ -0.63
CHMP3-205ENST00000409810 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.1□□□□□ -0.63
CHMP3-205ENST00000409810 GVINP1Q7Z2Y8 2422 aa11.1□□□□□ -0.63
CHMP3-205ENST00000409810 FRYLO94915 3013 aa11.1□□□□□ -0.63
CHMP3-205ENST00000409810 TRPM6Q9BX84 2022 aa11.09□□□□□ -0.63
CHMP3-205ENST00000409810 CACNA1EQ15878 2313 aa11.09□□□□□ -0.63
CHMP3-205ENST00000409810 KPNA3O00505 521 aaPredicted RBP11.09□□□□□ -0.63
CHMP3-205ENST00000409810 ARHGAP6O43182 974 aa11.09□□□□□ -0.63
CHMP3-205ENST00000409810 BUB1BO60566 1050 aaPredicted RBP11.09□□□□□ -0.63
CHMP3-205ENST00000409810 PALMO75781 387 aa11.09□□□□□ -0.63
CHMP3-205ENST00000409810 CD160O95971 181 aa11.09□□□□□ -0.63
CHMP3-205ENST00000409810 CD48P09326 243 aa11.09□□□□□ -0.63
CHMP3-205ENST00000409810 GNSP15586 552 aa11.09□□□□□ -0.63
CHMP3-205ENST00000409810 KDELR1P24390 212 aa11.09□□□□□ -0.63
CHMP3-205ENST00000409810 PTGER3P43115 390 aa11.09□□□□□ -0.63
CHMP3-205ENST00000409810 CCNHP51946 323 aaPredicted RBP11.09□□□□□ -0.63
CHMP3-205ENST00000409810 MMRN1Q13201 1228 aa11.09□□□□□ -0.63
CHMP3-205ENST00000409810 GRM3Q14832 879 aa11.09□□□□□ -0.63
CHMP3-205ENST00000409810 CSRP2Q16527 193 aa11.09□□□□□ -0.63
CHMP3-205ENST00000409810 ATP13A4Q4VNC1 1196 aa11.09□□□□□ -0.63
CHMP3-205ENST00000409810 CPNE8Q86YQ8 564 aa11.09□□□□□ -0.63
CHMP3-205ENST00000409810 SYT12Q8IV01 421 aa11.09□□□□□ -0.63
CHMP3-205ENST00000409810 ARHGAP12Q8IWW6 846 aa11.09□□□□□ -0.63
CHMP3-205ENST00000409810 RGL4Q8IZJ4 473 aa11.09□□□□□ -0.63
CHMP3-205ENST00000409810 DCLK2Q8N568 766 aa11.09□□□□□ -0.63
CHMP3-205ENST00000409810 NPWQ8N729 165 aa11.09□□□□□ -0.63
CHMP3-205ENST00000409810 C12orf50Q8NA57 414 aaPredicted RBP11.09□□□□□ -0.63
CHMP3-205ENST00000409810 TPCN2Q8NHX9 752 aa11.09□□□□□ -0.63
CHMP3-205ENST00000409810 GRIN3AQ8TCU5 1115 aa11.09□□□□□ -0.63
CHMP3-205ENST00000409810 PIGKQ92643 395 aa11.09□□□□□ -0.63
CHMP3-205ENST00000409810 FAF2Q96CS3 445 aa11.09□□□□□ -0.63
CHMP3-205ENST00000409810 ZNF830Q96NB3 372 aaPredicted RBP11.09□□□□□ -0.63
CHMP3-205ENST00000409810 ZNF599Q96NL3 588 aa11.09□□□□□ -0.63
CHMP3-205ENST00000409810 CINPQ9BW66 212 aaPredicted RBP11.09□□□□□ -0.63
CHMP3-205ENST00000409810 OSBPL1AQ9BXW6 950 aa11.09□□□□□ -0.63
CHMP3-205ENST00000409810 TSGA10Q9BZW7 698 aa11.09□□□□□ -0.63
CHMP3-205ENST00000409810 NEUROG2Q9H2A3 272 aa11.09□□□□□ -0.63
CHMP3-205ENST00000409810 KDM4CQ9H3R0 1056 aa11.09□□□□□ -0.63
CHMP3-205ENST00000409810 ZDHHC6Q9H6R6 413 aa11.09□□□□□ -0.63
CHMP3-205ENST00000409810 PDFQ9HBH1 243 aa11.09□□□□□ -0.63
CHMP3-205ENST00000409810 SEMA4GQ9NTN9 838 aa11.09□□□□□ -0.63
CHMP3-205ENST00000409810 HAUS2Q9NVX0 235 aa11.09□□□□□ -0.63
CHMP3-205ENST00000409810 IPO11Q9UI26 975 aaKnown RBP11.09□□□□□ -0.63
CHMP3-205ENST00000409810 ACTL7AQ9Y615 435 aa11.09□□□□□ -0.63
CHMP3-205ENST00000409810 ALG6Q9Y672 507 aa11.09□□□□□ -0.63
CHMP3-205ENST00000409810 METTL12A8MUP2 240 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 J3KR12 359 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 MFSD11O43934 449 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 ZNF821O75541 412 aaPredicted RBP11.08□□□□□ -0.64
CHMP3-205ENST00000409810 LEFTY1O75610 366 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 POP4O95707 220 aaKnown RBP11.08□□□□□ -0.64
CHMP3-205ENST00000409810 CTSLP07711 333 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 ZNF806P0C7X5 589 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 TNNT1P13805 278 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 ZFXP17010 805 aaPredicted RBP11.08□□□□□ -0.64
CHMP3-205ENST00000409810 MX2P20592 715 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 ITPKAP23677 461 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 IL4RP24394 825 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 ACSL1P33121 698 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 DRD3P35462 400 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 HSPA9P38646 679 aaKnown RBP11.08□□□□□ -0.64
CHMP3-205ENST00000409810 RENBPP51606 427 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 ADPRHP54922 357 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 LMNB2Q03252 620 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 PAFAH1B3Q15102 231 aaKnown RBP11.08□□□□□ -0.64
CHMP3-205ENST00000409810 DUOXA1Q1HG43 343 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 ARSIQ5FYB1 569 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 PLA2G2CQ5R387 149 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 DCAF12L1Q5VU92 463 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 NCBP2-AS2Q69YL0 99 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 TIGD7Q6NT04 549 aaPredicted RBP11.08□□□□□ -0.64
CHMP3-205ENST00000409810 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.08□□□□□ -0.64
CHMP3-205ENST00000409810 LEKR1Q6ZMV7 388 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 SLC41A1Q8IVJ1 513 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 SYCE1Q8N0S2 351 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 AADATQ8N5Z0 425 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 DEFB119Q8N690 84 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 CHST14Q8NCH0 376 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 OR2T34Q8NGX1 318 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 OR14C36Q8NHC7 312 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 CEP76Q8TAP6 659 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 SNX19Q92543 992 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 RAPGEF5Q92565 580 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 RNF157Q96PX1 679 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 ETNK2Q9NVF9 386 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 SERGEFQ9UGK8 458 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 SEPT3Q9UH03 358 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 PILRBQ9UKJ0 227 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 SARDHQ9UL12 918 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 TFR2Q9UP52 801 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms