RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 ATP6V0A2Q9Y487 856 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.63□□□□□ -1.51
CLK1-202ENST00000409403 ADGRA3Q8IWK6 1321 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 ATRNL1Q5VV63 1379 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 NAV2Q8IVL1 2488 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 C2orf78A6NCI8 922 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 LRRC53A6NM62 1247 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 FAM227AF5H4B4 570 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 MAGEB2O15479 319 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 SGTAO43765 313 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 FKBP6O75344 327 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 PEX14O75381 377 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 TCEA3O75764 348 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 TUSC2O75896 110 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 TTLL1O95922 423 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 FGAP02671 866 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 UBTFL6P0CB48 400 aaPredicted RBP5.63□□□□□ -1.51
CLK1-202ENST00000409403 GM2AP17900 193 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 EPHB2P29323 1055 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 CRABP2P29373 138 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 IL15P40933 162 aaPredicted RBP5.63□□□□□ -1.51
CLK1-202ENST00000409403 IL12RB1P42701 662 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 KIR2DL3P43628 341 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 RPL5P46777 297 aaKnown RBP5.63□□□□□ -1.51
CLK1-202ENST00000409403 TRPC1P48995 793 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 AFF3P51826 1226 aaKnown RBP5.63□□□□□ -1.51
CLK1-202ENST00000409403 LINC00310P59036 64 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 DSC2Q02487 901 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 GFPT1Q06210 699 aaPredicted RBP5.63□□□□□ -1.51
CLK1-202ENST00000409403 MED21Q13503 144 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 HNRNPDQ14103 355 aaKnown RBP5.63□□□□□ -1.51
CLK1-202ENST00000409403 BCL2A1Q16548 175 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 TRMT5Q32P41 509 aaKnown RBP5.63□□□□□ -1.51
CLK1-202ENST00000409403 RABL6Q3YEC7 729 aaPredicted RBP5.63□□□□□ -1.51
CLK1-202ENST00000409403 MIIPQ5JXC2 388 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 KIAA1755Q5JYT7 1200 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 TCERG1LQ5VWI1 586 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 ZNF530Q6P9A1 599 aaPredicted RBP5.63□□□□□ -1.51
CLK1-202ENST00000409403 BORAQ6PGQ7 559 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 GPR155Q7Z3F1 870 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 PEX26Q7Z412 305 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 DAAM2Q86T65 1068 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 SLC15A3Q8IY34 581 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 PEX5LQ8IYB4 626 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 ZBED8Q8IZ13 594 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 ADGRG2Q8IZP9 1017 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 VPS52Q8N1B4 723 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 SYT2Q8N9I0 419 aaPredicted RBP5.63□□□□□ -1.51
CLK1-202ENST00000409403 SUPT20HQ8NEM7 779 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 IL17REQ8NFR9 667 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 PJA1Q8NG27 643 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 ADAMTS17Q8TE56 1095 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 TRPC4APQ8TEL6 797 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 SLC7A6OSQ96CW6 309 aaPredicted RBP5.63□□□□□ -1.51
CLK1-202ENST00000409403 LCORQ96JN0 433 aaPredicted RBP5.63□□□□□ -1.51
CLK1-202ENST00000409403 TSG101Q99816 390 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 ECSITQ9BQ95 431 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 BTBD10Q9BSF8 475 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 NEUROG2Q9H2A3 272 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 MANSC1Q9H8J5 431 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 MMRN2Q9H8L6 949 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 BCO1Q9HAY6 547 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 PFDN4Q9NQP4 134 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 ZDHHC18Q9NUE0 388 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 TDP1Q9NUW8 608 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 QPCTLQ9NXS2 382 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 SENP1Q9P0U3 644 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 ZNHIT2Q9UHR6 403 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 GABRQQ9UN88 632 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 PCDHB1Q9Y5F3 818 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 MYH1P12882 1939 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 A0A1B0GTL3 188 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 KANSL1LA0AUZ9 987 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 E9PBE3 544 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 TPP1O14773 563 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 SLC16A6O15403 523 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 TTI1O43156 1089 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 RIPK2O43353 540 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 B3GALT2O43825 422 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 ZBED1O96006 694 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 PLEKP08567 350 aaPredicted RBP5.62□□□□□ -1.51
CLK1-202ENST00000409403 RHCEP18577 417 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 GNAT2P19087 354 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 POLR2EP19388 210 aaKnown RBP5.62□□□□□ -1.51
CLK1-202ENST00000409403 CHRNA3P32297 505 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 SLC6A9P48067 706 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 TMED10P49755 219 aaKnown RBP5.62□□□□□ -1.51
CLK1-202ENST00000409403 CCT8P50990 548 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 SLC18A1P54219 525 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 PER3P56645 1201 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 RHBDL3P58872 404 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 HAND2P61296 217 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 CDC42EP1Q00587 391 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 RHDQ02161 417 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 PLOD1Q02809 727 aaPredicted RBP5.62□□□□□ -1.51
CLK1-202ENST00000409403 LRRC63Q05C16 580 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 KLRC3Q07444 240 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 KCNA10Q16322 511 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 ASIC2Q16515 512 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 AAK1Q2M2I8 961 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms