RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 FBXL8Q96CD0 374 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 THAP11Q96EK4 314 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 MRIQ9BWK5 157 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 PLAC1Q9HBJ0 212 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 NCKIPSDQ9NZQ3 722 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 RNF181Q9P0P0 153 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 DGKBQ9Y6T7 804 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 STRCQ7RTU9 1775 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 H3BMM5 538 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 TOR1BO14657 336 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 MRASO14807 208 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 NRP2O60462 931 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 FAM58BPP0C7Q3 252 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 STMN1P16949 149 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 ZNF23P17027 643 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 LRPAP1P30533 357 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 GRIK1P39086 918 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 RPL14P50914 215 aaKnown RBP8.44□□□□□ -1.06
SNX13-201ENST00000409076 CCNA1P78396 465 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 MAP3K21Q5TCX8 1036 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 C16orf87Q6PH81 154 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 RALGPS2Q86X27 583 aaPredicted RBP8.44□□□□□ -1.06
SNX13-201ENST00000409076 PDSS2Q86YH6 399 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 EXOC8Q8IYI6 725 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 NPWQ8N729 165 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 MAGEE2Q8TD90 523 aaPredicted RBP8.44□□□□□ -1.06
SNX13-201ENST00000409076 VPS33AQ96AX1 596 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 LRCH3Q96II8 777 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 SORT1Q99523 831 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 TBCDQ9BTW9 1192 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 DGCR6LQ9BY27 220 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 BPIFA1Q9NP55 256 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 SIRPGQ9P1W8 387 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 NME7Q9Y5B8 376 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 U3KQV3 271 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 TCRBV5S1A1TA0A578 114 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 SUPT3HB4E1H0 165 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 F8W810 466 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 BOLA2-SMG1P6H3BVE0 249 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 TSPAN1O60635 241 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 GABBR2O75899 941 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 THRAP10827 490 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 NFKBIAP25963 317 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 PCSK6P29122 969 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 PSME3P61289 254 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 SOX4Q06945 474 aaPredicted RBP8.44□□□□□ -1.06
SNX13-201ENST00000409076 PIGFQ07326 219 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 PFKFB4Q16877 469 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 TBCELQ5QJ74 424 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 LCLAT1Q6UWP7 414 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 XKR5Q6UX68 686 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 CCDC81Q6ZN84 652 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 PRR23BQ6ZRT6 265 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 UBR7Q8N806 425 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 GATA6Q92908 595 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 HACD3Q9P035 362 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 CIDEBQ9UHD4 219 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 NOD1Q9Y239 953 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 LINC00854A0A1B0GVQ3 168 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 CAPN14A8MX76 684 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 E7ESA3 106 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 PTGES3LE9PB15 166 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 GNGT2O14610 69 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 B4GALT4O60513 344 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 MAGEC1O60732 1142 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 TADA2AO75478 443 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 RNASEH2AO75792 299 aaKnown RBP8.43□□□□□ -1.06
SNX13-201ENST00000409076 RTN3O95197 1032 aaPredicted RBP8.43□□□□□ -1.06
SNX13-201ENST00000409076 SETSIPP0DME0 302 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 PTPN3P26045 913 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 CCR1P32246 355 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 HADHAP40939 763 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 TAS2R39P59534 338 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 MYLK3Q32MK0 819 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 GPR158Q5T848 1215 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 OSTM1Q86WC4 334 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 SNX29P2Q8IUI4 249 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 TRPC4APQ8TEL6 797 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 NCLNQ969V3 563 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 RMDN1Q96DB5 314 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 GCOM2Q9BZD3 368 aaPredicted RBP8.43□□□□□ -1.06
SNX13-201ENST00000409076 EFCAB1Q9HAE3 211 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 VPS4AQ9UN37 437 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 TNFSF13BQ9Y275 285 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 ACTL7AQ9Y615 435 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 FAM159BA6NKW6 160 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 C19orf81C9J6K1 198 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 PLOD2O00469 737 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 UBDO15205 165 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 SCNN1GP51170 649 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 DYNC1I2Q13409 638 aaKnown RBP8.43□□□□□ -1.06
SNX13-201ENST00000409076 GALNT3Q14435 633 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 LBRQ14739 615 aaKnown RBP8.43□□□□□ -1.06
SNX13-201ENST00000409076 TCEAL1Q15170 157 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 RBBP7Q16576 425 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 PERM1Q5SV97 790 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 C16orf89Q6UX73 402 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 KYAT3Q6YP21 454 aaKnown RBP8.43□□□□□ -1.06
SNX13-201ENST00000409076 HERC6Q8IVU3 1022 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 CEP97Q8IW35 865 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms