RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 RIOK3O14730 519 aaKnown RBP9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 TSPAN6O43657 245 aa9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 KDELR3O43731 214 aa9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 AP1G1O43747 822 aa9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 PRPSAP2O60256 369 aa9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 LEFTY1O75610 366 aa9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 ZMPSTE24O75844 475 aa9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 PCDH8O95206 1070 aa9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 POP4O95707 220 aaKnown RBP9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 PSMA2P25787 234 aa9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 EPHA8P29322 1005 aaPredicted RBP9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 MAT2AP31153 395 aaKnown RBP9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 RXRGP48443 463 aa9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 CCNHP51946 323 aaPredicted RBP9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 TPI1P60174 286 aa9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 RPS21P63220 83 aaKnown RBP9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 ARF5P84085 180 aa9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 KLHL30Q0D2K2 578 aa9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 POM121L1PQ3SYA9 428 aa9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 INO80DQ53TQ3 878 aaPredicted RBP9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 PIP5KL1Q5T9C9 394 aa9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 IRF2BP2Q7Z5L9 587 aa9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 PHLDB2Q86SQ0 1253 aa9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 DCP2Q8IU60 420 aaKnown RBP9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 PSTKQ8IV42 348 aaKnown RBP9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 CCDC185Q8N715 623 aa9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 OR2AP1Q8NGE2 309 aa9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 FNIP1Q8TF40 1166 aa9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 BAP1Q92560 729 aa9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 ARHGEF2Q92974 986 aaKnown RBP9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 KLHDC7BQ96G42 594 aa9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 FEM1CQ96JP0 617 aa9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 TNKS2Q9H2K2 1166 aa9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 ZDHHC6Q9H6R6 413 aa9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 AIPL1Q9NZN9 384 aa9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 DNAI1Q9UI46 699 aa9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 WASF3Q9UPY6 502 aa9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 PCDHGA1Q9Y5H4 931 aa9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 CABIN1Q9Y6J0 2220 aa9.25□□□□□ -0.93
SNORD88A-201ENST00000408314 PLXNA2O75051 1894 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 KNL1Q8NG31 2342 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 TCRBV5S1A1TA0A578 114 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 A6NNZ2 444 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 WASH4PA8MWX3 477 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 NEMP1O14524 444 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 TEX33O43247 280 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 DAPK3O43293 454 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 SMAD6O43541 496 aaKnown RBP9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 BUB1O43683 1085 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 CREB3O43889 395 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 LDOC1O95751 146 aaPredicted RBP9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 CTSLP07711 333 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 C1SP09871 688 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 ALPPL2P10696 532 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 ADRB3P13945 408 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 ACVRL1P37023 503 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 NDST2P52849 883 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 FAM193AP78312 1265 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 SGCGQ13326 291 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 ILKQ13418 452 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 ACAP1Q15027 740 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 SKOR2Q2VWA4 1001 aaPredicted RBP9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 TDRD12Q587J7 1177 aaKnown RBP9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 ZNF805Q5CZA5 627 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 ARSIQ5FYB1 569 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 PPP1R15BQ5SWA1 713 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 PLEKHA7Q6IQ23 1121 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 LAYNQ6UX15 382 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 UMODL1-AS1Q8N2C9 162 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 CHCHD4Q8N4Q1 142 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 KDF1Q8NAX2 398 aaPredicted RBP9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 CHST14Q8NCH0 376 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 DENND6BQ8NEG7 585 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 ZCCHC14Q8WYQ9 949 aaKnown RBP9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 SYN2Q92777 582 aaPredicted RBP9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 ARRDC3Q96B67 414 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 ZNF653Q96CK0 615 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 IFT43Q96FT9 208 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 CAMK1GQ96NX5 476 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 C1QTNF7Q9BXJ2 289 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 TM6SF2Q9BZW4 377 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 HAUS4Q9H6D7 363 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 ARHGAP20Q9P2F6 1191 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 FZD10Q9ULW2 581 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 FCF1Q9Y324 198 aaKnown RBP9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 SLCO1B1Q9Y6L6 691 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 WASF2Q9Y6W5 498 aa9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 COL5A1P20908 1838 aaPredicted RBP9.24□□□□□ -0.93
SNORD88A-201ENST00000408314 A0A1W2PQJ5 194 aa9.23□□□□□ -0.93
SNORD88A-201ENST00000408314 ARHGAP42A6NI28 874 aa9.23□□□□□ -0.93
SNORD88A-201ENST00000408314 TMCO5BA8MYB1 307 aa9.23□□□□□ -0.93
SNORD88A-201ENST00000408314 C1QTNF9BB2RNN3 333 aa9.23□□□□□ -0.93
SNORD88A-201ENST00000408314 RASA4BC9J798 803 aa9.23□□□□□ -0.93
SNORD88A-201ENST00000408314 FAM72CH0Y354 149 aa9.23□□□□□ -0.93
SNORD88A-201ENST00000408314 H3BM21 787 aa9.23□□□□□ -0.93
SNORD88A-201ENST00000408314 PLK4O00444 970 aa9.23□□□□□ -0.93
SNORD88A-201ENST00000408314 KRIT1O00522 736 aa9.23□□□□□ -0.93
SNORD88A-201ENST00000408314 SLC31A1O15431 190 aa9.23□□□□□ -0.93
SNORD88A-201ENST00000408314 RASA4O43374 803 aa9.23□□□□□ -0.93
SNORD88A-201ENST00000408314 TMCC1O94876 653 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms