RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 MARK4Q96L34 752 aa16.8■□□□□ 0.28
COL23A1-202ENST00000407622 VAT1Q99536 393 aa16.8■□□□□ 0.28
COL23A1-202ENST00000407622 DRC3Q9H069 523 aa16.8■□□□□ 0.28
COL23A1-202ENST00000407622 TLK1Q9UKI8 766 aa16.8■□□□□ 0.28
COL23A1-202ENST00000407622 RUVBL2Q9Y230 463 aaKnown RBP16.8■□□□□ 0.28
COL23A1-202ENST00000407622 PTCH2Q9Y6C5 1203 aa16.8■□□□□ 0.28
COL23A1-202ENST00000407622 VAPBO95292 243 aa16.8■□□□□ 0.28
COL23A1-202ENST00000407622 F9P00740 461 aa16.8■□□□□ 0.28
COL23A1-202ENST00000407622 FAM163BP0C2L3 166 aa16.8■□□□□ 0.28
COL23A1-202ENST00000407622 RAG1P15918 1043 aa16.8■□□□□ 0.28
COL23A1-202ENST00000407622 PRDX6P30041 224 aa16.8■□□□□ 0.28
COL23A1-202ENST00000407622 HOXC8P31273 242 aa16.8■□□□□ 0.28
COL23A1-202ENST00000407622 CPT1AP50416 773 aa16.8■□□□□ 0.28
COL23A1-202ENST00000407622 MTTPP55157 894 aa16.8■□□□□ 0.28
COL23A1-202ENST00000407622 LIPMQ5VYY2 423 aa16.8■□□□□ 0.28
COL23A1-202ENST00000407622 DENND5AQ6IQ26 1287 aa16.8■□□□□ 0.28
COL23A1-202ENST00000407622 DCLRE1AQ6PJP8 1040 aa16.8■□□□□ 0.28
COL23A1-202ENST00000407622 KDELC2Q7Z4H8 507 aa16.8■□□□□ 0.28
COL23A1-202ENST00000407622 SNX32Q86XE0 403 aa16.8■□□□□ 0.28
COL23A1-202ENST00000407622 RTKNQ9BST9 563 aa16.8■□□□□ 0.28
COL23A1-202ENST00000407622 CSNK1G1Q9HCP0 422 aa16.8■□□□□ 0.28
COL23A1-202ENST00000407622 SLC38A7Q9NVC3 462 aa16.8■□□□□ 0.28
COL23A1-202ENST00000407622 RAP2CQ9Y3L5 183 aa16.8■□□□□ 0.28
COL23A1-202ENST00000407622 FNDC1Q4ZHG4 1894 aaPredicted RBP16.79■□□□□ 0.28
COL23A1-202ENST00000407622 NYNRINQ9P2P1 1898 aaKnown RBP16.79■□□□□ 0.28
COL23A1-202ENST00000407622 EME2A4GXA9 379 aaPredicted RBP16.79■□□□□ 0.28
COL23A1-202ENST00000407622 TARM1B6A8C7 271 aa16.79■□□□□ 0.28
COL23A1-202ENST00000407622 BRCC3P46736 316 aa16.79■□□□□ 0.28
COL23A1-202ENST00000407622 NUDT2P50583 147 aa16.79■□□□□ 0.28
COL23A1-202ENST00000407622 RPL14P50914 215 aaKnown RBP16.79■□□□□ 0.28
COL23A1-202ENST00000407622 AQP4P55087 323 aa16.79■□□□□ 0.28
COL23A1-202ENST00000407622 GSTA3Q16772 222 aa16.79■□□□□ 0.28
COL23A1-202ENST00000407622 ARTNQ5T4W7 220 aa16.79■□□□□ 0.28
COL23A1-202ENST00000407622 ZNF280DQ6N043 979 aa16.79■□□□□ 0.28
COL23A1-202ENST00000407622 AGMOQ6ZNB7 445 aa16.79■□□□□ 0.28
COL23A1-202ENST00000407622 GDPD5Q8WTR4 605 aa16.79■□□□□ 0.28
COL23A1-202ENST00000407622 OMDQ99983 421 aa16.79■□□□□ 0.28
COL23A1-202ENST00000407622 TBL1YQ9BQ87 522 aa16.79■□□□□ 0.28
COL23A1-202ENST00000407622 FICDQ9BVA6 458 aa16.79■□□□□ 0.28
COL23A1-202ENST00000407622 ATXN3LQ9H3M9 355 aa16.79■□□□□ 0.28
COL23A1-202ENST00000407622 XPR1Q9UBH6 696 aa16.79■□□□□ 0.28
COL23A1-202ENST00000407622 TMEM233B4DJY2 109 aa16.79■□□□□ 0.28
COL23A1-202ENST00000407622 HDAC3O15379 428 aa16.79■□□□□ 0.28
COL23A1-202ENST00000407622 MSI1O43347 362 aaKnown RBP16.79■□□□□ 0.28
COL23A1-202ENST00000407622 CA12O43570 354 aa16.79■□□□□ 0.28
COL23A1-202ENST00000407622 CACNG3O60359 315 aa16.79■□□□□ 0.28
COL23A1-202ENST00000407622 DLX3O60479 287 aa16.79■□□□□ 0.28
COL23A1-202ENST00000407622 SMIM24O75264 130 aa16.79■□□□□ 0.28
COL23A1-202ENST00000407622 TFEBP19484 476 aa16.79■□□□□ 0.28
COL23A1-202ENST00000407622 PURAQ00577 322 aaKnown RBP16.79■□□□□ 0.28
COL23A1-202ENST00000407622 PRPSAP1Q14558 356 aa16.79■□□□□ 0.28
COL23A1-202ENST00000407622 TSTD2Q5T7W7 516 aa16.79■□□□□ 0.28
COL23A1-202ENST00000407622 THEMIS2Q5TEJ8 643 aa16.79■□□□□ 0.28
COL23A1-202ENST00000407622 SEL1L3Q68CR1 1132 aa16.79■□□□□ 0.28
COL23A1-202ENST00000407622 PKN3Q6P5Z2 889 aa16.79■□□□□ 0.28
COL23A1-202ENST00000407622 TMC7Q7Z402 723 aa16.79■□□□□ 0.28
COL23A1-202ENST00000407622 LRRTM3Q86VH5 581 aa16.79■□□□□ 0.28
COL23A1-202ENST00000407622 PNPLA1Q8N8W4 532 aa16.79■□□□□ 0.28
COL23A1-202ENST00000407622 STYXQ8WUJ0 223 aa16.79■□□□□ 0.28
COL23A1-202ENST00000407622 NXNL1Q96CM4 212 aa16.79■□□□□ 0.28
COL23A1-202ENST00000407622 CATSPER2Q96P56 530 aa16.79■□□□□ 0.28
COL23A1-202ENST00000407622 NR1H4Q96RI1 486 aaPredicted RBP16.79■□□□□ 0.28
COL23A1-202ENST00000407622 RRN3Q9NYV6 651 aa16.79■□□□□ 0.28
COL23A1-202ENST00000407622 COL4A4P53420 1690 aaPredicted RBP16.78■□□□□ 0.28
COL23A1-202ENST00000407622 MSX2P35548 267 aaPredicted RBP16.78■□□□□ 0.28
COL23A1-202ENST00000407622 CHRNA4P43681 627 aa16.78■□□□□ 0.28
COL23A1-202ENST00000407622 ARCN1P48444 511 aaKnown RBP16.78■□□□□ 0.28
COL23A1-202ENST00000407622 MRPS6P82932 125 aaKnown RBP16.78■□□□□ 0.28
COL23A1-202ENST00000407622 NSUN2Q08J23 767 aaKnown RBP eCLIP16.78■□□□□ 0.28
COL23A1-202ENST00000407622 HNRNPDQ14103 355 aaKnown RBP16.78■□□□□ 0.28
COL23A1-202ENST00000407622 UPP1Q16831 310 aa16.78■□□□□ 0.28
COL23A1-202ENST00000407622 METTL21CQ5VZV1 264 aa16.78■□□□□ 0.28
COL23A1-202ENST00000407622 FAM219BQ5XKK7 198 aa16.78■□□□□ 0.28
COL23A1-202ENST00000407622 LRRC8EQ6NSJ5 796 aa16.78■□□□□ 0.28
COL23A1-202ENST00000407622 KLHDC8BQ8IXV7 354 aa16.78■□□□□ 0.28
COL23A1-202ENST00000407622 ZNF483Q8TF39 744 aaPredicted RBP16.78■□□□□ 0.28
COL23A1-202ENST00000407622 SREK1Q8WXA9 508 aaKnown RBP16.78■□□□□ 0.28
COL23A1-202ENST00000407622 GPR78Q96P69 363 aa16.78■□□□□ 0.28
COL23A1-202ENST00000407622 TSGA13Q96PP4 275 aa16.78■□□□□ 0.28
COL23A1-202ENST00000407622 SFMBT1Q9UHJ3 866 aa16.78■□□□□ 0.28
COL23A1-202ENST00000407622 NUDT5Q9UKK9 219 aa16.78■□□□□ 0.28
COL23A1-202ENST00000407622 AURKAO14965 403 aa16.78■□□□□ 0.28
COL23A1-202ENST00000407622 H2AFYO75367 372 aaKnown RBP16.78■□□□□ 0.28
COL23A1-202ENST00000407622 CTGFP29279 349 aa16.78■□□□□ 0.28
COL23A1-202ENST00000407622 SLC12A1Q13621 1099 aa16.78■□□□□ 0.28
COL23A1-202ENST00000407622 FSCN1Q16658 493 aaKnown RBP16.78■□□□□ 0.28
COL23A1-202ENST00000407622 NOMO2Q5JPE7 1267 aa16.78■□□□□ 0.28
COL23A1-202ENST00000407622 PCID2Q5JVF3 399 aa16.78■□□□□ 0.28
COL23A1-202ENST00000407622 KBTBD6Q86V97 674 aa16.78■□□□□ 0.28
COL23A1-202ENST00000407622 ATPAF2Q8N5M1 289 aa16.78■□□□□ 0.28
COL23A1-202ENST00000407622 OR10T2Q8NGX3 314 aa16.78■□□□□ 0.28
COL23A1-202ENST00000407622 JADE3Q92613 823 aa16.78■□□□□ 0.28
COL23A1-202ENST00000407622 SGF29Q96ES7 293 aa16.78■□□□□ 0.28
COL23A1-202ENST00000407622 TSC22D3Q99576 134 aa16.78■□□□□ 0.28
COL23A1-202ENST00000407622 SLC39A8Q9C0K1 460 aa16.78■□□□□ 0.28
COL23A1-202ENST00000407622 AP5M1Q9H0R1 490 aa16.78■□□□□ 0.28
COL23A1-202ENST00000407622 ANKRD6Q9Y2G4 727 aa16.78■□□□□ 0.28
COL23A1-202ENST00000407622 FAM95CA0A1B0GW59 222 aa16.77■□□□□ 0.28
COL23A1-202ENST00000407622 F8W810 466 aa16.77■□□□□ 0.28
COL23A1-202ENST00000407622 MAFKO60675 156 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms