RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 VSTM4Q8IW00 320 aa10.54□□□□□ -0.72
FAM49A-202ENST00000406434 MINDY1Q8N5J2 469 aa10.54□□□□□ -0.72
FAM49A-202ENST00000406434 RTL3Q8N8U3 475 aaKnown RBP10.54□□□□□ -0.72
FAM49A-202ENST00000406434 NETO2Q8NC67 525 aa10.54□□□□□ -0.72
FAM49A-202ENST00000406434 FNIP1Q8TF40 1166 aa10.54□□□□□ -0.72
FAM49A-202ENST00000406434 HSPH1Q92598 858 aa10.54□□□□□ -0.72
FAM49A-202ENST00000406434 ARHGEF26Q96DR7 871 aa10.54□□□□□ -0.72
FAM49A-202ENST00000406434 CELF6Q96J87 481 aaKnown RBP10.54□□□□□ -0.72
FAM49A-202ENST00000406434 KCTD15Q96SI1 283 aaPredicted RBP10.54□□□□□ -0.72
FAM49A-202ENST00000406434 NCAPGQ9BPX3 1015 aa10.54□□□□□ -0.72
FAM49A-202ENST00000406434 TM6SF2Q9BZW4 377 aa10.54□□□□□ -0.72
FAM49A-202ENST00000406434 TRIM5Q9C035 493 aa10.54□□□□□ -0.72
FAM49A-202ENST00000406434 KLC2Q9H0B6 622 aa10.54□□□□□ -0.72
FAM49A-202ENST00000406434 NOL6Q9H6R4 1146 aaKnown RBP10.54□□□□□ -0.72
FAM49A-202ENST00000406434 IL36AQ9UHA7 158 aa10.54□□□□□ -0.72
FAM49A-202ENST00000406434 ANAPC7Q9UJX3 599 aa10.54□□□□□ -0.72
FAM49A-202ENST00000406434 NEU3Q9UQ49 428 aa10.54□□□□□ -0.72
FAM49A-202ENST00000406434 SLCO1B1Q9Y6L6 691 aa10.54□□□□□ -0.72
FAM49A-202ENST00000406434 ASCC3Q8N3C0 2202 aaKnown RBP10.54□□□□□ -0.72
FAM49A-202ENST00000406434 KNL1Q8NG31 2342 aa10.54□□□□□ -0.72
FAM49A-202ENST00000406434 MED19A0JLT2 244 aaPredicted RBP10.53□□□□□ -0.72
FAM49A-202ENST00000406434 WASH4PA8MWX3 477 aa10.53□□□□□ -0.72
FAM49A-202ENST00000406434 MYO1FO00160 1098 aa10.53□□□□□ -0.72
FAM49A-202ENST00000406434 TM4SF5O14894 197 aa10.53□□□□□ -0.72
FAM49A-202ENST00000406434 FGF10O15520 208 aaPredicted RBP10.53□□□□□ -0.72
FAM49A-202ENST00000406434 LRCH4O75427 683 aa10.53□□□□□ -0.72
FAM49A-202ENST00000406434 ZNF821O75541 412 aaPredicted RBP10.53□□□□□ -0.72
FAM49A-202ENST00000406434 LEFTY1O75610 366 aa10.53□□□□□ -0.72
FAM49A-202ENST00000406434 CD160O95971 181 aa10.53□□□□□ -0.72
FAM49A-202ENST00000406434 PRNPP04156 253 aa10.53□□□□□ -0.72
FAM49A-202ENST00000406434 CYP1A2P05177 515 aa10.53□□□□□ -0.72
FAM49A-202ENST00000406434 IGHV4-34P06331 123 aa10.53□□□□□ -0.72
FAM49A-202ENST00000406434 HNRNPH3P31942 346 aaKnown RBP10.53□□□□□ -0.72
FAM49A-202ENST00000406434 GKP32189 559 aa10.53□□□□□ -0.72
FAM49A-202ENST00000406434 GEMIN4P57678 1058 aaKnown RBP10.53□□□□□ -0.72
FAM49A-202ENST00000406434 YBEYP58557 167 aaPredicted RBP10.53□□□□□ -0.72
FAM49A-202ENST00000406434 CCDC15Q0P6D6 951 aa10.53□□□□□ -0.72
FAM49A-202ENST00000406434 GRIK2Q13002 908 aa10.53□□□□□ -0.72
FAM49A-202ENST00000406434 SEMA3BQ13214 749 aa10.53□□□□□ -0.72
FAM49A-202ENST00000406434 PIGHQ14442 188 aaPredicted RBP10.53□□□□□ -0.72
FAM49A-202ENST00000406434 TEAD4Q15561 434 aa10.53□□□□□ -0.72
FAM49A-202ENST00000406434 SMTNL2Q2TAL5 461 aa10.53□□□□□ -0.72
FAM49A-202ENST00000406434 KCNT1Q5JUK3 1230 aa10.53□□□□□ -0.72
FAM49A-202ENST00000406434 LAYNQ6UX15 382 aa10.53□□□□□ -0.72
FAM49A-202ENST00000406434 PRPF39Q86UA1 669 aaKnown RBP10.53□□□□□ -0.72
FAM49A-202ENST00000406434 PCDH20Q8N6Y1 951 aaKnown RBP10.53□□□□□ -0.72
FAM49A-202ENST00000406434 TMIEQ8NEW7 156 aa10.53□□□□□ -0.72
FAM49A-202ENST00000406434 OR6K2Q8NGY2 324 aa10.53□□□□□ -0.72
FAM49A-202ENST00000406434 KLK6Q92876 244 aa10.53□□□□□ -0.72
FAM49A-202ENST00000406434 ARRDC3Q96B67 414 aa10.53□□□□□ -0.72
FAM49A-202ENST00000406434 HMCESQ96FZ2 354 aa10.53□□□□□ -0.72
FAM49A-202ENST00000406434 CHP1Q99653 195 aa10.53□□□□□ -0.72
FAM49A-202ENST00000406434 HEPHQ9BQS7 1158 aa10.53□□□□□ -0.72
FAM49A-202ENST00000406434 CEP44Q9C0F1 390 aa10.53□□□□□ -0.72
FAM49A-202ENST00000406434 ZDHHC6Q9H6R6 413 aa10.53□□□□□ -0.72
FAM49A-202ENST00000406434 TM9SF3Q9HD45 589 aa10.53□□□□□ -0.72
FAM49A-202ENST00000406434 AASDHPPTQ9NRN7 309 aa10.53□□□□□ -0.72
FAM49A-202ENST00000406434 DONSONQ9NYP3 566 aa10.53□□□□□ -0.72
FAM49A-202ENST00000406434 CTTNBP2NLQ9P2B4 639 aa10.53□□□□□ -0.72
FAM49A-202ENST00000406434 IP6K2Q9UHH9 426 aa10.53□□□□□ -0.72
FAM49A-202ENST00000406434 CNOT1A5YKK6 2376 aaKnown RBP10.53□□□□□ -0.72
FAM49A-202ENST00000406434 SPTBN2O15020 2390 aa10.53□□□□□ -0.72
FAM49A-202ENST00000406434 NYNRINQ9P2P1 1898 aaKnown RBP10.53□□□□□ -0.72
FAM49A-202ENST00000406434 DOCK9Q9BZ29 2069 aa10.53□□□□□ -0.72
FAM49A-202ENST00000406434 A0A1W2PPC4 97 aa10.52□□□□□ -0.72
FAM49A-202ENST00000406434 RNF103O00237 685 aa10.52□□□□□ -0.72
FAM49A-202ENST00000406434 KRIT1O00522 736 aa10.52□□□□□ -0.72
FAM49A-202ENST00000406434 KCNK3O14649 394 aa10.52□□□□□ -0.72
FAM49A-202ENST00000406434 GIPC1O14908 333 aa10.52□□□□□ -0.72
FAM49A-202ENST00000406434 KCNK5O95279 499 aa10.52□□□□□ -0.72
FAM49A-202ENST00000406434 TCF4P15884 667 aa10.52□□□□□ -0.72
FAM49A-202ENST00000406434 ERCC2P18074 760 aa10.52□□□□□ -0.72
FAM49A-202ENST00000406434 IL1R2P27930 398 aa10.52□□□□□ -0.72
FAM49A-202ENST00000406434 HTR7P34969 479 aa10.52□□□□□ -0.72
FAM49A-202ENST00000406434 PCK1P35558 622 aa10.52□□□□□ -0.72
FAM49A-202ENST00000406434 AFF3P51826 1226 aaKnown RBP10.52□□□□□ -0.72
FAM49A-202ENST00000406434 CCNHP51946 323 aaPredicted RBP10.52□□□□□ -0.72
FAM49A-202ENST00000406434 SNRPD1P62314 119 aaKnown RBP10.52□□□□□ -0.72
FAM49A-202ENST00000406434 FOXK2Q01167 660 aa10.52□□□□□ -0.72
FAM49A-202ENST00000406434 SERINC3Q13530 473 aa10.52□□□□□ -0.72
FAM49A-202ENST00000406434 ACAP1Q15027 740 aa10.52□□□□□ -0.72
FAM49A-202ENST00000406434 SLC18A3Q16572 532 aa10.52□□□□□ -0.72
FAM49A-202ENST00000406434 BOLA3Q53S33 107 aa10.52□□□□□ -0.72
FAM49A-202ENST00000406434 SWT1Q5T5J6 900 aaKnown RBP10.52□□□□□ -0.72
FAM49A-202ENST00000406434 ATXN7L2Q5T6C5 722 aaPredicted RBP10.52□□□□□ -0.72
FAM49A-202ENST00000406434 PSAPL1Q6NUJ1 521 aa10.52□□□□□ -0.72
FAM49A-202ENST00000406434 RFX8Q6ZV50 586 aa10.52□□□□□ -0.72
FAM49A-202ENST00000406434 DEFB124Q8NES8 71 aa10.52□□□□□ -0.72
FAM49A-202ENST00000406434 C1orf216Q8TAB5 229 aa10.52□□□□□ -0.72
FAM49A-202ENST00000406434 SERAC1Q96JX3 654 aa10.52□□□□□ -0.72
FAM49A-202ENST00000406434 CCDC42Q96M95 316 aa10.52□□□□□ -0.72
FAM49A-202ENST00000406434 SLC6A18Q96N87 628 aa10.52□□□□□ -0.72
FAM49A-202ENST00000406434 DNAJC7Q99615 494 aa10.52□□□□□ -0.72
FAM49A-202ENST00000406434 ZDHHC5Q9C0B5 715 aa10.52□□□□□ -0.72
FAM49A-202ENST00000406434 SLC39A8Q9C0K1 460 aa10.52□□□□□ -0.72
FAM49A-202ENST00000406434 GAREM1Q9H706 876 aa10.52□□□□□ -0.72
FAM49A-202ENST00000406434 EBF2Q9HAK2 575 aa10.52□□□□□ -0.72
FAM49A-202ENST00000406434 IL21RQ9HBE5 538 aa10.52□□□□□ -0.72
FAM49A-202ENST00000406434 ABHD10Q9NUJ1 306 aa10.52□□□□□ -0.72
FAM49A-202ENST00000406434 CWC15Q9P013 229 aaKnown RBP10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms