RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 TDP1Q9NUW8 608 aa21.36■■□□□ 1.01
TPM1-208ENST00000404484 CHMP2BQ9UQN3 213 aa21.36■■□□□ 1.01
TPM1-208ENST00000404484 TTLL3Q9Y4R7 772 aa21.36■■□□□ 1.01
TPM1-208ENST00000404484 H0Y626 953 aa21.36■■□□□ 1.01
TPM1-208ENST00000404484 NRG2O14511 850 aaPredicted RBP21.36■■□□□ 1.01
TPM1-208ENST00000404484 RASGRF2O14827 1237 aa21.36■■□□□ 1.01
TPM1-208ENST00000404484 KDELR3O43731 214 aa21.36■■□□□ 1.01
TPM1-208ENST00000404484 BANF1O75531 89 aa21.36■■□□□ 1.01
TPM1-208ENST00000404484 CYBBP04839 570 aa21.36■■□□□ 1.01
TPM1-208ENST00000404484 HLA-DQB2P05538 268 aa21.36■■□□□ 1.01
TPM1-208ENST00000404484 RFTN1Q14699 578 aaPredicted RBP21.36■■□□□ 1.01
TPM1-208ENST00000404484 AGBL2Q5U5Z8 902 aa21.36■■□□□ 1.01
TPM1-208ENST00000404484 POTEHQ6S545 545 aa21.36■■□□□ 1.01
TPM1-208ENST00000404484 CCNJLQ8IV13 435 aa21.36■■□□□ 1.01
TPM1-208ENST00000404484 TTC16Q8NEE8 873 aa21.36■■□□□ 1.01
TPM1-208ENST00000404484 UHMK1Q8TAS1 419 aaKnown RBP21.36■■□□□ 1.01
TPM1-208ENST00000404484 NAT9Q9BTE0 207 aa21.36■■□□□ 1.01
TPM1-208ENST00000404484 MUC3BQ9H195 1237 aa21.36■■□□□ 1.01
TPM1-208ENST00000404484 SLC25A51Q9H1U9 297 aa21.36■■□□□ 1.01
TPM1-208ENST00000404484 KCNK12Q9HB15 430 aa21.36■■□□□ 1.01
TPM1-208ENST00000404484 CDH7Q9ULB5 785 aa21.36■■□□□ 1.01
TPM1-208ENST00000404484 SDR42E2A6NKP2 422 aa21.35■■□□□ 1.01
TPM1-208ENST00000404484 CDH18Q13634 790 aa21.35■■□□□ 1.01
TPM1-208ENST00000404484 LBRQ14739 615 aaKnown RBP21.35■■□□□ 1.01
TPM1-208ENST00000404484 HP1BP3Q5SSJ5 553 aaPredicted RBP21.35■■□□□ 1.01
TPM1-208ENST00000404484 CXorf57Q6NSI4 855 aaKnown RBP21.35■■□□□ 1.01
TPM1-208ENST00000404484 CARNMT1Q8N4J0 409 aa21.35■■□□□ 1.01
TPM1-208ENST00000404484 ST13P5Q8NFI4 369 aaPredicted RBP21.35■■□□□ 1.01
TPM1-208ENST00000404484 DDI1Q8WTU0 396 aa21.35■■□□□ 1.01
TPM1-208ENST00000404484 ING5Q8WYH8 240 aa21.35■■□□□ 1.01
TPM1-208ENST00000404484 ATP6V1G3Q96LB4 118 aa21.35■■□□□ 1.01
TPM1-208ENST00000404484 GORASP1Q9BQQ3 440 aa21.35■■□□□ 1.01
TPM1-208ENST00000404484 SPON2Q9BUD6 331 aa21.35■■□□□ 1.01
TPM1-208ENST00000404484 MLPHQ9BV36 600 aaPredicted RBP21.35■■□□□ 1.01
TPM1-208ENST00000404484 ACE2Q9BYF1 805 aaPredicted RBP21.35■■□□□ 1.01
TPM1-208ENST00000404484 CENPHQ9H3R5 247 aa21.35■■□□□ 1.01
TPM1-208ENST00000404484 KIF9Q9HAQ2 790 aa21.35■■□□□ 1.01
TPM1-208ENST00000404484 PDFQ9HBH1 243 aa21.35■■□□□ 1.01
TPM1-208ENST00000404484 ATP13A1Q9HD20 1204 aa21.35■■□□□ 1.01
TPM1-208ENST00000404484 TBC1D14Q9P2M4 693 aa21.35■■□□□ 1.01
TPM1-208ENST00000404484 AVILO75366 819 aa21.34■■□□□ 1.01
TPM1-208ENST00000404484 HOXD9P28356 352 aaPredicted RBP21.34■■□□□ 1.01
TPM1-208ENST00000404484 ZNF235Q14590 738 aa21.34■■□□□ 1.01
TPM1-208ENST00000404484 UBAP2Q5T6F2 1119 aaKnown RBP21.34■■□□□ 1.01
TPM1-208ENST00000404484 C3orf62Q6ZUJ4 267 aa21.34■■□□□ 1.01
TPM1-208ENST00000404484 KIAA1958Q8N8K9 716 aa21.34■■□□□ 1.01
TPM1-208ENST00000404484 OR7D4Q8NG98 312 aa21.34■■□□□ 1.01
TPM1-208ENST00000404484 EDAQ92838 391 aa21.34■■□□□ 1.01
TPM1-208ENST00000404484 USP13Q92995 863 aaPredicted RBP21.34■■□□□ 1.01
TPM1-208ENST00000404484 ZBTB9Q96C00 473 aa21.34■■□□□ 1.01
TPM1-208ENST00000404484 PGM2Q96G03 612 aa21.34■■□□□ 1.01
TPM1-208ENST00000404484 EBNA1BP2Q99848 306 aaKnown RBP21.34■■□□□ 1.01
TPM1-208ENST00000404484 NT5MQ9NPB1 228 aa21.34■■□□□ 1.01
TPM1-208ENST00000404484 VPS45Q9NRW7 570 aa21.34■■□□□ 1.01
TPM1-208ENST00000404484 UBA2Q9UBT2 640 aaPredicted RBP21.34■■□□□ 1.01
TPM1-208ENST00000404484 ZC3H7BQ9UGR2 993 aaKnown RBP21.34■■□□□ 1.01
TPM1-208ENST00000404484 A0A0D9SEW6 157 aa21.33■■□□□ 1.01
TPM1-208ENST00000404484 EXOC1LA0A1B0GW35 172 aa21.33■■□□□ 1.01
TPM1-208ENST00000404484 SCAMP3O14828 347 aaKnown RBP21.33■■□□□ 1.01
TPM1-208ENST00000404484 RRP9O43818 475 aaKnown RBP21.33■■□□□ 1.01
TPM1-208ENST00000404484 TECTAO75443 2155 aa21.33■■□□□ 1.01
TPM1-208ENST00000404484 CEBPBP17676 345 aa21.33■■□□□ 1.01
TPM1-208ENST00000404484 WEE1P30291 646 aa21.33■■□□□ 1.01
TPM1-208ENST00000404484 ZXDAP98168 799 aa21.33■■□□□ 1.01
TPM1-208ENST00000404484 SLC10A7Q0GE19 358 aa21.33■■□□□ 1.01
TPM1-208ENST00000404484 USP4Q13107 963 aa21.33■■□□□ 1.01
TPM1-208ENST00000404484 MPP3Q13368 585 aa21.33■■□□□ 1.01
TPM1-208ENST00000404484 KLHL38Q2WGJ6 581 aa21.33■■□□□ 1.01
TPM1-208ENST00000404484 RNF219Q5W0B1 726 aaPredicted RBP21.33■■□□□ 1.01
TPM1-208ENST00000404484 NPAS3Q8IXF0 933 aa21.33■■□□□ 1.01
TPM1-208ENST00000404484 RIBC1Q8N443 379 aaPredicted RBP21.33■■□□□ 1.01
TPM1-208ENST00000404484 ZNF557Q8N988 423 aaPredicted RBP21.33■■□□□ 1.01
TPM1-208ENST00000404484 ARL8AQ96BM9 186 aa21.33■■□□□ 1.01
TPM1-208ENST00000404484 SIGLEC10Q96LC7 697 aa21.33■■□□□ 1.01
TPM1-208ENST00000404484 WDR83Q9BRX9 315 aaKnown RBP21.33■■□□□ 1.01
TPM1-208ENST00000404484 SMG9Q9H0W8 520 aaKnown RBP21.33■■□□□ 1.01
TPM1-208ENST00000404484 C11orf16Q9NQ32 467 aa21.33■■□□□ 1.01
TPM1-208ENST00000404484 CASS4Q9NQ75 786 aa21.33■■□□□ 1.01
TPM1-208ENST00000404484 BFARQ9NZS9 450 aa21.33■■□□□ 1.01
TPM1-208ENST00000404484 FETUBQ9UGM5 382 aa21.33■■□□□ 1.01
TPM1-208ENST00000404484 SEPT3Q9UH03 358 aa21.33■■□□□ 1.01
TPM1-208ENST00000404484 RGS16O15492 202 aaPredicted RBP21.32■■□□□ 1
TPM1-208ENST00000404484 ATP5DP30049 168 aa21.32■■□□□ 1
TPM1-208ENST00000404484 STX2P32856 288 aa21.32■■□□□ 1
TPM1-208ENST00000404484 GPX6P59796 221 aa21.32■■□□□ 1
TPM1-208ENST00000404484 ZNF77Q15935 545 aa21.32■■□□□ 1
TPM1-208ENST00000404484 TTMPQ5BVD1 217 aa21.32■■□□□ 1
TPM1-208ENST00000404484 MFN1Q8IWA4 741 aa21.32■■□□□ 1
TPM1-208ENST00000404484 DNAAF3Q8N9W5 541 aa21.32■■□□□ 1
TPM1-208ENST00000404484 OTUB2Q96DC9 234 aa21.32■■□□□ 1
TPM1-208ENST00000404484 STAMBPL1Q96FJ0 436 aa21.32■■□□□ 1
TPM1-208ENST00000404484 IMP4Q96G21 291 aaKnown RBP21.32■■□□□ 1
TPM1-208ENST00000404484 OXNAD1Q96HP4 312 aaPredicted RBP21.32■■□□□ 1
TPM1-208ENST00000404484 ZNF419Q96HQ0 510 aaPredicted RBP21.32■■□□□ 1
TPM1-208ENST00000404484 POLR1EQ9GZS1 481 aaKnown RBP21.32■■□□□ 1
TPM1-208ENST00000404484 SORCS3Q9UPU3 1222 aa21.32■■□□□ 1
TPM1-208ENST00000404484 CCL26Q9Y258 94 aa21.32■■□□□ 1
TPM1-208ENST00000404484 MAD1L1Q9Y6D9 718 aa21.32■■□□□ 1
TPM1-208ENST00000404484 TLDC2A0PJX2 215 aa21.31■■□□□ 1
TPM1-208ENST00000404484 ANHXE9PGG2 379 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms