RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 VOPP1Q96AW1 172 aa19.54■□□□□ 0.72
RTN4-207ENST00000402434 ZNF670Q9BS34 389 aa19.54■□□□□ 0.72
RTN4-207ENST00000402434 TM6SF2Q9BZW4 377 aa19.54■□□□□ 0.72
RTN4-207ENST00000402434 IL36AQ9UHA7 158 aa19.54■□□□□ 0.72
RTN4-207ENST00000402434 EVLQ9UI08 416 aaPredicted RBP19.54■□□□□ 0.72
RTN4-207ENST00000402434 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.54■□□□□ 0.72
RTN4-207ENST00000402434 REXO2Q9Y3B8 237 aaKnown RBP19.54■□□□□ 0.72
RTN4-207ENST00000402434 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.54■□□□□ 0.72
RTN4-207ENST00000402434 RNF103O00237 685 aa19.53■□□□□ 0.72
RTN4-207ENST00000402434 SLC7A4O43246 635 aa19.53■□□□□ 0.72
RTN4-207ENST00000402434 LEFTY1O75610 366 aa19.53■□□□□ 0.72
RTN4-207ENST00000402434 IPO7O95373 1038 aaKnown RBP19.53■□□□□ 0.72
RTN4-207ENST00000402434 GJC1P36383 396 aa19.53■□□□□ 0.72
RTN4-207ENST00000402434 ADPRHP54922 357 aa19.53■□□□□ 0.72
RTN4-207ENST00000402434 SNRPD1P62314 119 aaKnown RBP19.53■□□□□ 0.72
RTN4-207ENST00000402434 CNTN1Q12860 1018 aa19.53■□□□□ 0.72
RTN4-207ENST00000402434 ARSIQ5FYB1 569 aa19.53■□□□□ 0.72
RTN4-207ENST00000402434 DCAF12L1Q5VU92 463 aa19.53■□□□□ 0.72
RTN4-207ENST00000402434 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.53■□□□□ 0.72
RTN4-207ENST00000402434 TP53INP2Q8IXH6 220 aa19.53■□□□□ 0.72
RTN4-207ENST00000402434 OR2T34Q8NGX1 318 aa19.53■□□□□ 0.72
RTN4-207ENST00000402434 PCDH19Q8TAB3 1148 aa19.53■□□□□ 0.72
RTN4-207ENST00000402434 CEP76Q8TAP6 659 aa19.53■□□□□ 0.72
RTN4-207ENST00000402434 FAF2Q96CS3 445 aa19.53■□□□□ 0.72
RTN4-207ENST00000402434 LRIG1Q96JA1 1093 aa19.53■□□□□ 0.72
RTN4-207ENST00000402434 KDM4CQ9H3R0 1056 aa19.53■□□□□ 0.72
RTN4-207ENST00000402434 UBA2Q9UBT2 640 aaPredicted RBP19.53■□□□□ 0.72
RTN4-207ENST00000402434 SPTBN4Q9H254 2564 aa19.53■□□□□ 0.72
RTN4-207ENST00000402434 CACNA1EQ15878 2313 aa19.53■□□□□ 0.72
RTN4-207ENST00000402434 RCCD1A6NED2 376 aa19.52■□□□□ 0.72
RTN4-207ENST00000402434 LRRC72A6NJI9 287 aa19.52■□□□□ 0.72
RTN4-207ENST00000402434 MEI4A8MW99 385 aa19.52■□□□□ 0.72
RTN4-207ENST00000402434 PATE3B3GLJ2 98 aa19.52■□□□□ 0.72
RTN4-207ENST00000402434 KPNA3O00505 521 aaPredicted RBP19.52■□□□□ 0.72
RTN4-207ENST00000402434 BUB1BO60566 1050 aaPredicted RBP19.52■□□□□ 0.72
RTN4-207ENST00000402434 POP4O95707 220 aaKnown RBP19.52■□□□□ 0.72
RTN4-207ENST00000402434 SERPINB6P35237 376 aa19.52■□□□□ 0.72
RTN4-207ENST00000402434 NOP2P46087 812 aaKnown RBP19.52■□□□□ 0.72
RTN4-207ENST00000402434 IL10RBQ08334 325 aa19.52■□□□□ 0.72
RTN4-207ENST00000402434 CYTH1Q15438 398 aa19.52■□□□□ 0.72
RTN4-207ENST00000402434 MYLK3Q32MK0 819 aa19.52■□□□□ 0.72
RTN4-207ENST00000402434 POM121L1PQ3SYA9 428 aa19.52■□□□□ 0.72
RTN4-207ENST00000402434 ANKRD20A8PQ5CZ79 823 aa19.52■□□□□ 0.72
RTN4-207ENST00000402434 AGBL4Q5VU57 503 aa19.52■□□□□ 0.72
RTN4-207ENST00000402434 TCEAL6Q6IPX3 200 aa19.52■□□□□ 0.72
RTN4-207ENST00000402434 SLC23A3Q6PIS1 610 aa19.52■□□□□ 0.72
RTN4-207ENST00000402434 NCEH1Q6PIU2 408 aa19.52■□□□□ 0.72
RTN4-207ENST00000402434 RABEPKQ7Z6M1 372 aa19.52■□□□□ 0.72
RTN4-207ENST00000402434 VSIG1Q86XK7 387 aa19.52■□□□□ 0.72
RTN4-207ENST00000402434 NETO2Q8NC67 525 aa19.52■□□□□ 0.72
RTN4-207ENST00000402434 C1orf216Q8TAB5 229 aa19.52■□□□□ 0.72
RTN4-207ENST00000402434 GRIN3AQ8TCU5 1115 aa19.52■□□□□ 0.72
RTN4-207ENST00000402434 RAPGEF5Q92565 580 aa19.52■□□□□ 0.72
RTN4-207ENST00000402434 TCEAL3Q969E4 200 aa19.52■□□□□ 0.72
RTN4-207ENST00000402434 BIRC7Q96CA5 298 aa19.52■□□□□ 0.72
RTN4-207ENST00000402434 CALN1Q9BXU9 219 aa19.52■□□□□ 0.72
RTN4-207ENST00000402434 IPO11Q9UI26 975 aaKnown RBP19.52■□□□□ 0.72
RTN4-207ENST00000402434 DMXL1Q9Y485 3027 aa19.52■□□□□ 0.71
RTN4-207ENST00000402434 ATXN2Q99700 1313 aaKnown RBP19.51■□□□□ 0.71
RTN4-207ENST00000402434 BTNL10A8MVZ5 291 aa19.51■□□□□ 0.71
RTN4-207ENST00000402434 GOLGA6L6A8MZA4 724 aa19.51■□□□□ 0.71
RTN4-207ENST00000402434 PRR5-ARHGAP8B1AHC4 643 aa19.51■□□□□ 0.71
RTN4-207ENST00000402434 ZNF487B1APH4 448 aa19.51■□□□□ 0.71
RTN4-207ENST00000402434 DFFAO00273 331 aa19.51■□□□□ 0.71
RTN4-207ENST00000402434 PLK4O00444 970 aa19.51■□□□□ 0.71
RTN4-207ENST00000402434 KHNYNO15037 678 aaKnown RBP19.51■□□□□ 0.71
RTN4-207ENST00000402434 PLRG1O43660 514 aaKnown RBP19.51■□□□□ 0.71
RTN4-207ENST00000402434 IGHV4-34P06331 123 aa19.51■□□□□ 0.71
RTN4-207ENST00000402434 COMTP21964 271 aa19.51■□□□□ 0.71
RTN4-207ENST00000402434 KDELR1P24390 212 aa19.51■□□□□ 0.71
RTN4-207ENST00000402434 MAOBP27338 520 aa19.51■□□□□ 0.71
RTN4-207ENST00000402434 IRX4P78413 519 aa19.51■□□□□ 0.71
RTN4-207ENST00000402434 ARHGAP8P85298 464 aa19.51■□□□□ 0.71
RTN4-207ENST00000402434 CCDC15Q0P6D6 951 aa19.51■□□□□ 0.71
RTN4-207ENST00000402434 PAFAH1B3Q15102 231 aaKnown RBP19.51■□□□□ 0.71
RTN4-207ENST00000402434 DUOXA1Q1HG43 343 aa19.51■□□□□ 0.71
RTN4-207ENST00000402434 PIP5KL1Q5T9C9 394 aa19.51■□□□□ 0.71
RTN4-207ENST00000402434 KIAA0895LQ68EN5 471 aa19.51■□□□□ 0.71
RTN4-207ENST00000402434 ARHGAP36Q6ZRI8 547 aa19.51■□□□□ 0.71
RTN4-207ENST00000402434 RHOT1Q8IXI2 618 aa19.51■□□□□ 0.71
RTN4-207ENST00000402434 RGL4Q8IZJ4 473 aa19.51■□□□□ 0.71
RTN4-207ENST00000402434 C12orf50Q8NA57 414 aaPredicted RBP19.51■□□□□ 0.71
RTN4-207ENST00000402434 OR14C36Q8NHC7 312 aa19.51■□□□□ 0.71
RTN4-207ENST00000402434 ARRDC3Q96B67 414 aa19.51■□□□□ 0.71
RTN4-207ENST00000402434 GDAP1L1Q96MZ0 367 aa19.51■□□□□ 0.71
RTN4-207ENST00000402434 HDAC8Q9BY41 377 aa19.51■□□□□ 0.71
RTN4-207ENST00000402434 KLHL11Q9NVR0 708 aa19.51■□□□□ 0.71
RTN4-207ENST00000402434 LHX3Q9UBR4 397 aa19.51■□□□□ 0.71
RTN4-207ENST00000402434 SUSD2Q9UGT4 822 aa19.51■□□□□ 0.71
RTN4-207ENST00000402434 SALL4Q9UJQ4 1053 aa19.51■□□□□ 0.71
RTN4-207ENST00000402434 ALG6Q9Y672 507 aa19.51■□□□□ 0.71
RTN4-207ENST00000402434 KNL1Q8NG31 2342 aa19.5■□□□□ 0.71
RTN4-207ENST00000402434 C3orf70A6NLC5 250 aaPredicted RBP19.5■□□□□ 0.71
RTN4-207ENST00000402434 SERPINF2P08697 491 aa19.5■□□□□ 0.71
RTN4-207ENST00000402434 GSDMDP57764 484 aa19.5■□□□□ 0.71
RTN4-207ENST00000402434 RHOAP61586 193 aa19.5■□□□□ 0.71
RTN4-207ENST00000402434 TRIM61Q5EBN2 209 aa19.5■□□□□ 0.71
RTN4-207ENST00000402434 ATXN7L2Q5T6C5 722 aaPredicted RBP19.5■□□□□ 0.71
RTN4-207ENST00000402434 LRRC49Q8IUZ0 686 aa19.5■□□□□ 0.71
RTN4-207ENST00000402434 PPP1R16AQ96I34 528 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms