RNA–Protein interactions for RNA: ENST00000400771.7

ATG4B-202, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 663 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-202ENST00000400771 A0A1W2PR77 199 aa15.73■□□□□ 0.11
ATG4B-202ENST00000400771 EIF3CLB5ME19 914 aaKnown RBP15.73■□□□□ 0.11
ATG4B-202ENST00000400771 SPINT1O43278 529 aa15.73■□□□□ 0.11
ATG4B-202ENST00000400771 KDELR3O43731 214 aa15.73■□□□□ 0.11
ATG4B-202ENST00000400771 OPHN1O60890 802 aa15.73■□□□□ 0.11
ATG4B-202ENST00000400771 TMCC1O94876 653 aa15.73■□□□□ 0.11
ATG4B-202ENST00000400771 PRNPP04156 253 aa15.73■□□□□ 0.11
ATG4B-202ENST00000400771 PMLP29590 882 aa15.73■□□□□ 0.11
ATG4B-202ENST00000400771 PCK1P35558 622 aa15.73■□□□□ 0.11
ATG4B-202ENST00000400771 EIF4A3P38919 411 aaKnown RBP15.73■□□□□ 0.11
ATG4B-202ENST00000400771 SLC25A11Q02978 314 aaKnown RBP15.73■□□□□ 0.11
ATG4B-202ENST00000400771 SERINC3Q13530 473 aa15.73■□□□□ 0.11
ATG4B-202ENST00000400771 DPYSQ14117 519 aa15.73■□□□□ 0.11
ATG4B-202ENST00000400771 TRIM14Q14142 442 aa15.73■□□□□ 0.11
ATG4B-202ENST00000400771 KIF19Q2TAC6 998 aa15.73■□□□□ 0.11
ATG4B-202ENST00000400771 ERMARDQ5T6L9 678 aa15.73■□□□□ 0.11
ATG4B-202ENST00000400771 N4BP2L1Q5TBK1 243 aaPredicted RBP15.73■□□□□ 0.11
ATG4B-202ENST00000400771 AFMIDQ63HM1 303 aa15.73■□□□□ 0.11
ATG4B-202ENST00000400771 ALKBH5Q6P6C2 394 aaKnown RBP15.73■□□□□ 0.11
ATG4B-202ENST00000400771 RFX8Q6ZV50 586 aa15.73■□□□□ 0.11
ATG4B-202ENST00000400771 PARS2Q7L3T8 475 aaKnown RBP15.73■□□□□ 0.11
ATG4B-202ENST00000400771 CPNE8Q86YQ8 564 aa15.73■□□□□ 0.11
ATG4B-202ENST00000400771 ARHGAP12Q8IWW6 846 aa15.73■□□□□ 0.11
ATG4B-202ENST00000400771 CCDC114Q96M63 670 aa15.73■□□□□ 0.11
ATG4B-202ENST00000400771 EIF3CQ99613 913 aaKnown RBP15.73■□□□□ 0.11
ATG4B-202ENST00000400771 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.73■□□□□ 0.11
ATG4B-202ENST00000400771 PACSIN1Q9BY11 444 aa15.73■□□□□ 0.11
ATG4B-202ENST00000400771 KDM4CQ9H3R0 1056 aa15.73■□□□□ 0.11
ATG4B-202ENST00000400771 CATSPERBQ9H7T0 1116 aa15.73■□□□□ 0.11
ATG4B-202ENST00000400771 MRPL47Q9HD33 250 aaKnown RBP15.73■□□□□ 0.11
ATG4B-202ENST00000400771 LHX3Q9UBR4 397 aa15.73■□□□□ 0.11
ATG4B-202ENST00000400771 MFHAS1Q9Y4C4 1052 aa15.73■□□□□ 0.11
ATG4B-202ENST00000400771 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.73■□□□□ 0.112e-6■■□□□ 12.6
ATG4B-202ENST00000400771 SNX11Q9Y5W9 270 aa15.73■□□□□ 0.11
ATG4B-202ENST00000400771 PLXNB3Q9ULL4 1909 aa15.72■□□□□ 0.11
ATG4B-202ENST00000400771 EEF2KO00418 725 aaKnown RBP15.72■□□□□ 0.11
ATG4B-202ENST00000400771 KPNA3O00505 521 aaPredicted RBP15.72■□□□□ 0.11
ATG4B-202ENST00000400771 CBFA2T2O43439 604 aa15.72■□□□□ 0.11
ATG4B-202ENST00000400771 MFAP3LO75121 409 aa15.72■□□□□ 0.11
ATG4B-202ENST00000400771 GSRP00390 522 aa15.72■□□□□ 0.11
ATG4B-202ENST00000400771 TPM3P06753 285 aa15.72■□□□□ 0.11
ATG4B-202ENST00000400771 ZNF883P0CG24 379 aa15.72■□□□□ 0.11
ATG4B-202ENST00000400771 KCNA4P22459 653 aa15.72■□□□□ 0.11
ATG4B-202ENST00000400771 ITGB7P26010 798 aa15.72■□□□□ 0.11
ATG4B-202ENST00000400771 GKP32189 559 aa15.72■□□□□ 0.11
ATG4B-202ENST00000400771 CTSKP43235 329 aa15.72■□□□□ 0.11
ATG4B-202ENST00000400771 ATXN3P54252 364 aaPredicted RBP15.72■□□□□ 0.11
ATG4B-202ENST00000400771 YBEYP58557 167 aaPredicted RBP15.72■□□□□ 0.11
ATG4B-202ENST00000400771 RACK1P63244 317 aaKnown RBP15.72■□□□□ 0.11
ATG4B-202ENST00000400771 MAPK8IP2Q13387 824 aaPredicted RBP15.72■□□□□ 0.11
ATG4B-202ENST00000400771 DPYSL2Q16555 572 aa15.72■□□□□ 0.11
ATG4B-202ENST00000400771 PARP15Q460N3 678 aa15.72■□□□□ 0.11
ATG4B-202ENST00000400771 CARD16Q5EG05 197 aa15.72■□□□□ 0.11
ATG4B-202ENST00000400771 ARSIQ5FYB1 569 aa15.72■□□□□ 0.11
ATG4B-202ENST00000400771 VPS36Q86VN1 386 aa15.72■□□□□ 0.11
ATG4B-202ENST00000400771 PSTKQ8IV42 348 aaKnown RBP15.72■□□□□ 0.11
ATG4B-202ENST00000400771 PLPP6Q8IY26 295 aa15.72■□□□□ 0.11
ATG4B-202ENST00000400771 NETO2Q8NC67 525 aa15.72■□□□□ 0.11
ATG4B-202ENST00000400771 OR6K2Q8NGY2 324 aa15.72■□□□□ 0.11
ATG4B-202ENST00000400771 NUP85Q9BW27 656 aa15.72■□□□□ 0.11
ATG4B-202ENST00000400771 HDAC8Q9BY41 377 aa15.72■□□□□ 0.11
ATG4B-202ENST00000400771 PREBQ9HCU5 417 aa15.72■□□□□ 0.11
ATG4B-202ENST00000400771 ANKRD6Q9Y2G4 727 aa15.72■□□□□ 0.11
ATG4B-202ENST00000400771 ASPMQ8IZT6 3477 aa15.72■□□□□ 0.11
ATG4B-202ENST00000400771 WDFY3Q8IZQ1 3526 aa15.71■□□□□ 0.11
ATG4B-202ENST00000400771 ZSCAN5CA6NGD5 496 aaPredicted RBP15.71■□□□□ 0.11
ATG4B-202ENST00000400771 VILLO15195 856 aa15.71■□□□□ 0.11
ATG4B-202ENST00000400771 PRPSAP2O60256 369 aa15.71■□□□□ 0.11
ATG4B-202ENST00000400771 RNF8O76064 485 aa15.71■□□□□ 0.11
ATG4B-202ENST00000400771 CER1O95813 267 aa15.71■□□□□ 0.11
ATG4B-202ENST00000400771 CEACAM1P13688 526 aa15.71■□□□□ 0.11
ATG4B-202ENST00000400771 DESP17661 470 aa15.71■□□□□ 0.11
ATG4B-202ENST00000400771 ABL2P42684 1182 aa15.71■□□□□ 0.11
ATG4B-202ENST00000400771 GEMIN4P57678 1058 aaKnown RBP15.71■□□□□ 0.11
ATG4B-202ENST00000400771 FAM193AP78312 1265 aa15.71■□□□□ 0.11
ATG4B-202ENST00000400771 ACAP1Q15027 740 aa15.71■□□□□ 0.11
ATG4B-202ENST00000400771 SLC18A3Q16572 532 aa15.71■□□□□ 0.11
ATG4B-202ENST00000400771 ZNF423Q2M1K9 1284 aa15.71■□□□□ 0.11
ATG4B-202ENST00000400771 SMTNL2Q2TAL5 461 aa15.71■□□□□ 0.11
ATG4B-202ENST00000400771 HLA-BQ31612 363 aa15.71■□□□□ 0.11
ATG4B-202ENST00000400771 ATXN7L2Q5T6C5 722 aaPredicted RBP15.71■□□□□ 0.11
ATG4B-202ENST00000400771 SARM1Q6SZW1 724 aa15.71■□□□□ 0.11
ATG4B-202ENST00000400771 ERN2Q76MJ5 926 aaKnown RBP15.71■□□□□ 0.11
ATG4B-202ENST00000400771 TP53INP2Q8IXH6 220 aa15.71■□□□□ 0.11
ATG4B-202ENST00000400771 OR2AP1Q8NGE2 309 aa15.71■□□□□ 0.11
ATG4B-202ENST00000400771 BAHD1Q8TBE0 780 aaPredicted RBP15.71■□□□□ 0.11
ATG4B-202ENST00000400771 CELF6Q96J87 481 aaKnown RBP15.71■□□□□ 0.11
ATG4B-202ENST00000400771 HEPHQ9BQS7 1158 aa15.71■□□□□ 0.11
ATG4B-202ENST00000400771 ZDHHC6Q9H6R6 413 aa15.71■□□□□ 0.11
ATG4B-202ENST00000400771 GAREM1Q9H706 876 aa15.71■□□□□ 0.11
ATG4B-202ENST00000400771 ABHD10Q9NUJ1 306 aa15.71■□□□□ 0.11
ATG4B-202ENST00000400771 CWC15Q9P013 229 aaKnown RBP15.71■□□□□ 0.11
ATG4B-202ENST00000400771 ANAPC7Q9UJX3 599 aa15.71■□□□□ 0.11
ATG4B-202ENST00000400771 ZFR2Q9UPR6 939 aaKnown RBP15.71■□□□□ 0.11
ATG4B-202ENST00000400771 WASF3Q9UPY6 502 aa15.71■□□□□ 0.11
ATG4B-202ENST00000400771 TBC1D3DA0A087WVF3 549 aa15.7■□□□□ 0.1
ATG4B-202ENST00000400771 TBC1D3IA0A087WXS9 549 aa15.7■□□□□ 0.1
ATG4B-202ENST00000400771 TBC1D3EA0A087X179 549 aa15.7■□□□□ 0.1
ATG4B-202ENST00000400771 TBC1D3KA0A087X1G2 549 aa15.7■□□□□ 0.1
ATG4B-202ENST00000400771 SSU72P8A0A1W2PR75 194 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms