RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 GRIK5Q16478 980 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 ZNF605Q86T29 641 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 OR6Y1Q8NGX8 325 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 CD99L2Q8TCZ2 262 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 MTMR8Q96EF0 704 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 PPCSQ9HAB8 311 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 C1QTNF7Q9BXJ2 289 aa13.91□□□□□ -0.18
VAPA-202ENST00000400000 FAM126AQ9BYI3 521 aaPredicted RBP13.91□□□□□ -0.18
VAPA-202ENST00000400000 CYP3A43Q9HB55 503 aa13.91□□□□□ -0.18
VAPA-202ENST00000400000 GOLGA2P5Q9HBQ8 144 aa13.91□□□□□ -0.18
VAPA-202ENST00000400000 ADAM30Q9UKF2 790 aa13.91□□□□□ -0.18
VAPA-202ENST00000400000 ZMYND8Q9ULU4 1186 aaPredicted RBP13.91□□□□□ -0.18
VAPA-202ENST00000400000 A0A0U1RQJ8 604 aa13.91□□□□□ -0.18
VAPA-202ENST00000400000 CCNG2Q16589 344 aa13.91□□□□□ -0.18
VAPA-202ENST00000400000 RNF19BQ6ZMZ0 732 aa13.91□□□□□ -0.18
VAPA-202ENST00000400000 BPIFB6Q8NFQ5 453 aa13.91□□□□□ -0.18
VAPA-202ENST00000400000 OR52K2Q8NGK3 314 aa13.91□□□□□ -0.18
VAPA-202ENST00000400000 ARNTL2Q8WYA1 636 aa13.91□□□□□ -0.18
VAPA-202ENST00000400000 KLHL31Q9H511 634 aa13.91□□□□□ -0.18
VAPA-202ENST00000400000 CPS1P31327 1500 aa13.91□□□□□ -0.18
VAPA-202ENST00000400000 COL9A2Q14055 689 aaPredicted RBP13.91□□□□□ -0.18
VAPA-202ENST00000400000 ARMC8Q8IUR7 673 aa13.91□□□□□ -0.18
VAPA-202ENST00000400000 KBTBD2Q8IY47 623 aa13.91□□□□□ -0.18
VAPA-202ENST00000400000 MAGEE2Q8TD90 523 aaPredicted RBP13.91□□□□□ -0.18
VAPA-202ENST00000400000 TINF2Q9BSI4 451 aa13.91□□□□□ -0.18
VAPA-202ENST00000400000 TMA7Q9Y2S6 64 aaKnown RBP13.91□□□□□ -0.18
VAPA-202ENST00000400000 BCLAF3A2AJT9 711 aaKnown RBP13.91□□□□□ -0.18
VAPA-202ENST00000400000 KCNH1O95259 989 aa13.91□□□□□ -0.18
VAPA-202ENST00000400000 PROCP04070 461 aa13.91□□□□□ -0.18
VAPA-202ENST00000400000 PRG2P13727 222 aa13.91□□□□□ -0.18
VAPA-202ENST00000400000 BUD31P41223 144 aaPredicted RBP13.91□□□□□ -0.18
VAPA-202ENST00000400000 CLVS1Q8IUQ0 354 aaPredicted RBP13.91□□□□□ -0.18
VAPA-202ENST00000400000 MRPL9Q9BYD2 267 aaKnown RBP13.91□□□□□ -0.18
VAPA-202ENST00000400000 STON1Q9Y6Q2 735 aa13.91□□□□□ -0.18
VAPA-202ENST00000400000 SMAPO00193 183 aa13.91□□□□□ -0.18
VAPA-202ENST00000400000 B4GALT5O43286 388 aa13.91□□□□□ -0.18
VAPA-202ENST00000400000 RPN2P04844 631 aa13.91□□□□□ -0.18
VAPA-202ENST00000400000 ZNF24P17028 368 aa13.91□□□□□ -0.18
VAPA-202ENST00000400000 ACSM2AQ08AH3 577 aa13.91□□□□□ -0.18
VAPA-202ENST00000400000 ACSM2BQ68CK6 577 aa13.91□□□□□ -0.18
VAPA-202ENST00000400000 REXO5Q96IC2 774 aaKnown RBP13.91□□□□□ -0.18
VAPA-202ENST00000400000 PAIP1Q9H074 479 aaKnown RBP13.91□□□□□ -0.18
VAPA-202ENST00000400000 SLITRK2Q9H156 845 aa13.91□□□□□ -0.18
VAPA-202ENST00000400000 ABCC13Q9NSE7 274 aa13.91□□□□□ -0.18
VAPA-202ENST00000400000 NINJ2Q9NZG7 142 aa13.91□□□□□ -0.18
VAPA-202ENST00000400000 EFCAB10A6NFE3 127 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 PSMD9O00233 223 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 PIGNO95427 931 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 CASP5P51878 434 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 MRPS6P82932 125 aaKnown RBP13.9□□□□□ -0.18
VAPA-202ENST00000400000 IRF8Q02556 426 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 CDC73Q6P1J9 531 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 PRSS58Q8IYP2 241 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 SMYD1Q8NB12 490 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 PPP1R16AQ96I34 528 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 MSI1O43347 362 aaKnown RBP13.9□□□□□ -0.18
VAPA-202ENST00000400000 PIK3R1P27986 724 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 BRCC3P46736 316 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 TUFMP49411 452 aaKnown RBP13.9□□□□□ -0.18
VAPA-202ENST00000400000 STXBP1P61764 594 aaKnown RBP13.9□□□□□ -0.18
VAPA-202ENST00000400000 RPTNQ6XPR3 784 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 KDM7AQ6ZMT4 941 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 DEF8Q6ZN54 512 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 APTXQ7Z2E3 356 aaKnown RBP13.9□□□□□ -0.18
VAPA-202ENST00000400000 ADGRG2Q8IZP9 1017 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 TEKT5Q96M29 485 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 MYLK2Q9H1R3 596 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 BRD9Q9H8M2 597 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 DIP2AQ14689 1571 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 SLC26A4O43511 780 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 AVILO75366 819 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 SLC12A3P55017 1021 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 POLR2LP62875 67 aaKnown RBP13.9□□□□□ -0.18
VAPA-202ENST00000400000 KLHL5Q96PQ7 755 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 ZNF518BQ9C0D4 1074 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 DMGDHQ9UI17 866 aaKnown RBP13.9□□□□□ -0.18
VAPA-202ENST00000400000 PLAGL2Q9UPG8 496 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 PCDHA3Q9Y5H8 950 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 A0A087X0B3 334 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 HYIQ5T013 277 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 KCNK18Q7Z418 384 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 PRRG3Q9BZD7 231 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 TLE6Q9H808 572 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 ETNK2Q9NVF9 386 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 AP4S1Q9Y587 144 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 MFN2O95140 757 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 LSM8O95777 96 aaKnown RBP13.9□□□□□ -0.18
VAPA-202ENST00000400000 GABRR2P28476 465 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 PSMD8P48556 350 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 RPL38P63173 70 aaKnown RBP13.9□□□□□ -0.18
VAPA-202ENST00000400000 CTBP1Q13363 440 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 HECTD3Q5T447 861 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 WDR59Q6PJI9 974 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 ZNF276Q8N554 614 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 VANGL1Q8TAA9 524 aaPredicted RBP13.9□□□□□ -0.18
VAPA-202ENST00000400000 KLK6Q92876 244 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 TBCBQ99426 244 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 ARHGAP28Q9P2N2 729 aa13.9□□□□□ -0.18
VAPA-202ENST00000400000 CASZ1Q86V15 1759 aa13.9□□□□□ -0.19
VAPA-202ENST00000400000 ATP6AP2A0A1C7CYW4 349 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms