RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 LARGE1O95461 756 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 CYP4F2P78329 520 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 CYP4F3Q08477 520 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 COLEC12Q5KU26 742 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 DPP8Q6V1X1 898 aaPredicted RBP8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 PAGE2Q7Z2X7 111 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 PCSK9Q8NBP7 692 aaKnown RBP8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 ZNF607Q96SK3 696 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 LPIN3Q9BQK8 851 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 IRX2Q9BZI1 471 aaPredicted RBP8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 TOR4AQ9NXH8 423 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 AKAP6Q13023 2319 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 C6orf222P0C671 652 aaPredicted RBP8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 ANXA3P12429 323 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 SCNN1BP51168 640 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 SLC34A1Q06495 639 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 PLEKHG6Q3KR16 790 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 SYVN1Q86TM6 617 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 OXR1Q8N573 874 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 PRRG4Q9BZD6 226 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 NMRK2Q9NPI5 230 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 ADGRG1Q9Y653 693 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 PRPF3O43395 683 aaKnown RBP8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 RAD51CO43502 376 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 RHOBTB3O94955 611 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 CMPK1P30085 196 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 CCZ1BP86790 482 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 CCZ1P86791 482 aaPredicted RBP8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 FAM122CQ6P4D5 195 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 NFKBIZQ9BYH8 718 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 SLC38A7Q9NVC3 462 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 CCDC163A0A0D9SF12 145 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 FAM230AA0A1W2PPH8 454 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 CXCR2P25025 360 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 GNALP38405 381 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 USP46P62068 366 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 MBTD1Q05BQ5 628 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 C3orf62Q6ZUJ4 267 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 CREB3L1Q96BA8 519 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 GIN1Q9NXP7 522 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 SRRDQ9UH36 339 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 PCSK1NQ9UHG2 260 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 AK6Q9Y3D8 172 aaKnown RBP8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 NACADO15069 1562 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 GRAP2O75791 330 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 LRIG2O94898 1065 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 SPIDRQ14159 915 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 ASTE1Q2TB18 679 aaPredicted RBP8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 MTDHQ86UE4 582 aaKnown RBP8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 EIF3KQ9UBQ5 218 aaKnown RBP8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 A0A0G2JN53 185 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 OR3A3P47888 321 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 OR3A2P47893 321 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 DYNLL1P63167 89 aaKnown RBP8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 PPP2CAP67775 309 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 RAB39AQ14964 217 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 ARL6IP4Q66PJ3 421 aaKnown RBP8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 FAAH2Q6GMR7 532 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 TMEM192Q8IY95 271 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 SLC41A3Q96GZ6 507 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 TREX2Q9BQ50 279 aaPredicted RBP8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 FAM49BQ9NUQ9 324 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 ABCC4O15439 1325 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 LCHNA4D1U4 455 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 DBIP07108 87 aaKnown RBP8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 YES1P07947 543 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 TLE2Q04725 743 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 ZNF280DQ6N043 979 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 MCFD2Q8NI22 146 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 PPP1R16AQ96I34 528 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 ABCB9Q9NP78 766 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 DUSP22Q9NRW4 184 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 A8MVJ9 347 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 ENTPD5O75356 428 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 CERKLQ49MI3 558 aaPredicted RBP8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 OR7G2Q8NG99 324 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 MYH13Q9UKX3 1938 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 PIGRP01833 764 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 HNF4AP41235 474 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 KCNJ6P48051 423 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 ALDH9A1P49189 494 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 TTMPQ5BVD1 217 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 BTF3L4Q96K17 158 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 RSAD1Q9HA92 442 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 ERVK-11Q9UQG0 969 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 ATP6V1G2-DDX39BF2Z307 99 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 M0QX08 132 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 ATP6V1G2O95670 118 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 MFSD10Q14728 455 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 SYDE2Q5VT97 1194 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 BPIFA3Q9BQP9 254 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 PRMT7Q9NVM4 692 aaPredicted RBP8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 DNAAF2Q9NVR5 837 aaKnown RBP8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 GAKO14976 1311 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 GRIA2P42262 883 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 PPIL2Q13356 520 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 BATFQ16520 125 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 TIGD2Q4W5G0 525 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 OTUD3Q5T2D3 398 aaPredicted RBP8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 JAZF1Q86VZ6 243 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms