RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 SF1Q15637 639 aaKnown RBP11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 SULT1C3Q6IMI6 304 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 C4orf22Q6V702 233 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 IFNL1Q8IU54 200 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 Q8N9G6 341 aaPredicted RBP11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 COPS5Q92905 334 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 ART5Q96L15 291 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 DCBLD2Q96PD2 775 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 LGMNQ99538 433 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 FAIM2Q9BWQ8 316 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 TRABDQ9H4I3 376 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 BPIFA1Q9NP55 256 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 STK39Q9UEW8 545 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 LYVE1Q9Y5Y7 322 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 GPR75-ASB3A0A0A6YYF3 556 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 CCT8L1PA6NM43 557 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 TMEM114B3SHH9 223 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 PSMD9O00233 223 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 CES2O00748 559 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 KHDRBS3O75525 346 aaKnown RBP11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 S100A1P23297 94 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 ALDH4A1P30038 563 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 HSPA9P38646 679 aaKnown RBP11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 FXR1P51114 621 aaKnown RBP eCLIP11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 C3orf62Q6ZUJ4 267 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 C2orf73Q8N5S3 287 aaPredicted RBP11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 SPATA20Q8TB22 786 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 PHPT1Q9NRX4 125 aaPredicted RBP11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 ZNF510Q9Y2H8 683 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 SALL1Q9NSC2 1324 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 E7ENQ6 273 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 CDH16O75309 829 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 RECQL4O94761 1208 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 CYP11B2P19099 503 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 EPORP19235 508 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 CACNA2D1P54289 1103 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 GALCP54803 685 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 BOLA3Q53S33 107 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 LRRC8DQ7L1W4 858 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 ZNF483Q8TF39 744 aaPredicted RBP11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 C17orf75Q9HAS0 396 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 GPAMQ9HCL2 828 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 TMEM138Q9NPI0 162 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 TAF6LQ9Y6J9 622 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 KIF20BQ96Q89 1820 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 DCLK1O15075 740 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 TOP3BO95985 862 aaKnown RBP11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 PTPRAP18433 802 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 ATP5F1P24539 256 aaPredicted RBP11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 ARMCX4Q5H9R4 360 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 TAS1R3Q7RTX0 852 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 CTU1Q7Z7A3 348 aaKnown RBP11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 ZNF786Q8N393 782 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 HJURPQ8NCD3 748 aaPredicted RBP11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 CCDC54Q8NEL0 328 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 SPPL2AQ8TCT8 520 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 LRRC1Q9BTT6 524 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 CEP41Q9BYV8 373 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 VPS33BQ9H267 617 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 ABCC13Q9NSE7 274 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 ARL15Q9NXU5 204 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 DDX20Q9UHI6 824 aaKnown RBP11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 ARL2BPQ9Y2Y0 163 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 CHD1O14646 1710 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 ABHD14A-ACY1A0A1B0GW23 586 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 TRPC5OSA6NMA1 111 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 TAF4O00268 1085 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 O00370 1275 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 KPNA5O15131 536 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 NDST1P52848 882 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 RAPSNQ13702 412 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 KCNT1Q5JUK3 1230 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 CDC73Q6P1J9 531 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 ISLR2Q6UXK2 745 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 FAM83AQ86UY5 434 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 EME1Q96AY2 570 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 ROPN1BQ9BZX4 212 aaPredicted RBP11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 TRIM2Q9C040 744 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 ROPN1Q9HAT0 212 aaPredicted RBP11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 MGRN1O60291 552 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 PLEKP08567 350 aaPredicted RBP11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 ZNF806P0C7X5 589 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 TGFB3P10600 412 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 RBP3P10745 1247 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 UBA1P22314 1058 aaKnown RBP11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 PAX3P23760 479 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 CAPZA1P52907 286 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 ST3GAL1Q11201 340 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 ATP6AP1LQ52LC2 224 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 C2orf27AQ580R0 203 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 MFSD7Q6UXD7 560 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 CHST9Q7L1S5 443 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 ATG9AQ7Z3C6 839 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 LONP2Q86WA8 852 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 RNF31Q96EP0 1072 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 RBM15Q96T37 977 aaKnown RBP eCLIP11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 CELF4Q9BZC1 486 aaKnown RBP11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 RACGAP1Q9H0H5 632 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 NRDE2Q9H7Z3 1164 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 SEPT3Q9UH03 358 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms