RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 TMCC1O94876 653 aa14.34□□□□□ -0.11
HLA-DQB1-202ENST00000399079 SERPINF2P08697 491 aa14.34□□□□□ -0.11
HLA-DQB1-202ENST00000399079 DPP6P42658 865 aa14.34□□□□□ -0.11
HLA-DQB1-202ENST00000399079 PAPOLAP51003 745 aaKnown RBP14.34□□□□□ -0.11
HLA-DQB1-202ENST00000399079 NDST2P52849 883 aa14.34□□□□□ -0.11
HLA-DQB1-202ENST00000399079 CDH6P55285 790 aa14.34□□□□□ -0.11
HLA-DQB1-202ENST00000399079 MMRN1Q13201 1228 aa14.34□□□□□ -0.11
HLA-DQB1-202ENST00000399079 STPG1Q5TH74 334 aa14.34□□□□□ -0.11
HLA-DQB1-202ENST00000399079 AGBL4Q5VU57 503 aa14.34□□□□□ -0.11
HLA-DQB1-202ENST00000399079 AFMIDQ63HM1 303 aa14.34□□□□□ -0.11
HLA-DQB1-202ENST00000399079 ARHGAP36Q6ZRI8 547 aa14.34□□□□□ -0.11
HLA-DQB1-202ENST00000399079 RYBPQ8N488 228 aaPredicted RBP14.34□□□□□ -0.11
HLA-DQB1-202ENST00000399079 OR2T34Q8NGX1 318 aa14.34□□□□□ -0.11
HLA-DQB1-202ENST00000399079 C1orf216Q8TAB5 229 aa14.34□□□□□ -0.11
HLA-DQB1-202ENST00000399079 CEP76Q8TAP6 659 aa14.34□□□□□ -0.11
HLA-DQB1-202ENST00000399079 FAM131CQ96AQ9 280 aa14.34□□□□□ -0.11
HLA-DQB1-202ENST00000399079 VOPP1Q96AW1 172 aa14.34□□□□□ -0.11
HLA-DQB1-202ENST00000399079 ISG20Q96AZ6 181 aaKnown RBP14.34□□□□□ -0.11
HLA-DQB1-202ENST00000399079 ARRDC3Q96B67 414 aa14.34□□□□□ -0.11
HLA-DQB1-202ENST00000399079 HEPHQ9BQS7 1158 aa14.34□□□□□ -0.11
HLA-DQB1-202ENST00000399079 PCED1AQ9H1Q7 454 aa14.34□□□□□ -0.11
HLA-DQB1-202ENST00000399079 ZDHHC6Q9H6R6 413 aa14.34□□□□□ -0.11
HLA-DQB1-202ENST00000399079 EBF2Q9HAK2 575 aa14.34□□□□□ -0.11
HLA-DQB1-202ENST00000399079 KLHL11Q9NVR0 708 aa14.34□□□□□ -0.11
HLA-DQB1-202ENST00000399079 DONSONQ9NYP3 566 aa14.34□□□□□ -0.11
HLA-DQB1-202ENST00000399079 SLC6A14Q9UN76 642 aa14.34□□□□□ -0.11
HLA-DQB1-202ENST00000399079 TBC1D3DA0A087WVF3 549 aa14.33□□□□□ -0.12
HLA-DQB1-202ENST00000399079 TBC1D3IA0A087WXS9 549 aa14.33□□□□□ -0.12
HLA-DQB1-202ENST00000399079 TBC1D3EA0A087X179 549 aa14.33□□□□□ -0.12
HLA-DQB1-202ENST00000399079 TBC1D3KA0A087X1G2 549 aa14.33□□□□□ -0.12
HLA-DQB1-202ENST00000399079 TBC1D3FA6NER0 549 aaPredicted RBP14.33□□□□□ -0.12
HLA-DQB1-202ENST00000399079 ZSCAN5CA6NGD5 496 aaPredicted RBP14.33□□□□□ -0.12
HLA-DQB1-202ENST00000399079 SOWAHDA6NJG2 315 aa14.33□□□□□ -0.12
HLA-DQB1-202ENST00000399079 LRRC72A6NJI9 287 aa14.33□□□□□ -0.12
HLA-DQB1-202ENST00000399079 C4orf47A7E2U8 309 aa14.33□□□□□ -0.12
HLA-DQB1-202ENST00000399079 TBC1D3LB9A6J9 549 aa14.33□□□□□ -0.12
HLA-DQB1-202ENST00000399079 DFFAO00273 331 aa14.33□□□□□ -0.12
HLA-DQB1-202ENST00000399079 CDX4O14627 284 aaPredicted RBP14.33□□□□□ -0.12
HLA-DQB1-202ENST00000399079 BCAT2O15382 392 aaPredicted RBP14.33□□□□□ -0.12
HLA-DQB1-202ENST00000399079 PRNPP04156 253 aa14.33□□□□□ -0.12
HLA-DQB1-202ENST00000399079 TBC1D3HP0C7X1 549 aa14.33□□□□□ -0.12
HLA-DQB1-202ENST00000399079 GNSP15586 552 aa14.33□□□□□ -0.12
HLA-DQB1-202ENST00000399079 ENGP17813 658 aa14.33□□□□□ -0.12
HLA-DQB1-202ENST00000399079 IL4RP24394 825 aa14.33□□□□□ -0.12
HLA-DQB1-202ENST00000399079 MAPK8P45983 427 aa14.33□□□□□ -0.12
HLA-DQB1-202ENST00000399079 ZNF135P52742 658 aaPredicted RBP14.33□□□□□ -0.12
HLA-DQB1-202ENST00000399079 PPP2CBP62714 309 aa14.33□□□□□ -0.12
HLA-DQB1-202ENST00000399079 PPP2CAP67775 309 aa14.33□□□□□ -0.12
HLA-DQB1-202ENST00000399079 KRT81Q14533 505 aa14.33□□□□□ -0.12
HLA-DQB1-202ENST00000399079 HADHQ16836 314 aaKnown RBP14.33□□□□□ -0.12
HLA-DQB1-202ENST00000399079 PIP5KL1Q5T9C9 394 aa14.33□□□□□ -0.12
HLA-DQB1-202ENST00000399079 KIAA0895LQ68EN5 471 aa14.33□□□□□ -0.12
HLA-DQB1-202ENST00000399079 TBC1D3GQ6DHY5 549 aa14.33□□□□□ -0.12
HLA-DQB1-202ENST00000399079 TBC1D3CQ6IPX1 549 aa14.33□□□□□ -0.12
HLA-DQB1-202ENST00000399079 TBC1D3Q8IZP1 549 aaPredicted RBP14.33□□□□□ -0.12
HLA-DQB1-202ENST00000399079 OR2AP1Q8NGE2 309 aa14.33□□□□□ -0.12
HLA-DQB1-202ENST00000399079 OR2I1PQ8NGU4 316 aa14.33□□□□□ -0.12
HLA-DQB1-202ENST00000399079 RFFLQ8WZ73 363 aa14.33□□□□□ -0.12
HLA-DQB1-202ENST00000399079 TSC1Q92574 1164 aa14.33□□□□□ -0.12
HLA-DQB1-202ENST00000399079 PANX2Q96RD6 677 aa14.33□□□□□ -0.12
HLA-DQB1-202ENST00000399079 ORAI3Q9BRQ5 295 aa14.33□□□□□ -0.12
HLA-DQB1-202ENST00000399079 PDFQ9HBH1 243 aa14.33□□□□□ -0.12
HLA-DQB1-202ENST00000399079 DCDC2BA2VCK2 349 aa14.32□□□□□ -0.12
HLA-DQB1-202ENST00000399079 ARHGAP42A6NI28 874 aa14.32□□□□□ -0.12
HLA-DQB1-202ENST00000399079 KRIT1O00522 736 aa14.32□□□□□ -0.12
HLA-DQB1-202ENST00000399079 PLRG1O43660 514 aaKnown RBP14.32□□□□□ -0.12
HLA-DQB1-202ENST00000399079 PRAMEF11O60813 436 aa14.32□□□□□ -0.12
HLA-DQB1-202ENST00000399079 MAGEA1P43355 309 aa14.32□□□□□ -0.12
HLA-DQB1-202ENST00000399079 ARSEP51690 589 aa14.32□□□□□ -0.12
HLA-DQB1-202ENST00000399079 TAS2R38P59533 333 aa14.32□□□□□ -0.12
HLA-DQB1-202ENST00000399079 SNRPD1P62314 119 aaKnown RBP14.32□□□□□ -0.12
HLA-DQB1-202ENST00000399079 CYTH1Q15438 398 aa14.32□□□□□ -0.12
HLA-DQB1-202ENST00000399079 INO80DQ53TQ3 878 aaPredicted RBP14.32□□□□□ -0.12
HLA-DQB1-202ENST00000399079 LAYNQ6UX15 382 aa14.32□□□□□ -0.12
HLA-DQB1-202ENST00000399079 RABEPKQ7Z6M1 372 aa14.32□□□□□ -0.12
HLA-DQB1-202ENST00000399079 RHOT2Q8IXI1 618 aa14.32□□□□□ -0.12
HLA-DQB1-202ENST00000399079 EXOC2Q96KP1 924 aa14.32□□□□□ -0.12
HLA-DQB1-202ENST00000399079 GTPBP2Q9BX10 602 aaKnown RBP14.32□□□□□ -0.12
HLA-DQB1-202ENST00000399079 CALN1Q9BXU9 219 aa14.32□□□□□ -0.12
HLA-DQB1-202ENST00000399079 UBA2Q9UBT2 640 aaPredicted RBP14.32□□□□□ -0.12
HLA-DQB1-202ENST00000399079 SUSD2Q9UGT4 822 aa14.32□□□□□ -0.12
HLA-DQB1-202ENST00000399079 ADAMTS9Q9P2N4 1935 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 A0A1B0GTW7 788 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 C10orf142B7Z368 130 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 ARHGAP33O14559 1287 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 SLC30A4O14863 429 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 MTA2O94776 668 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 LCA5LO95447 670 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 GSRP00390 522 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 CD27P26842 260 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 MAT2AP31153 395 aaKnown RBP14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 CSNK1EP49674 416 aaKnown RBP14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 LIMK1P53667 647 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 RHOAP61586 193 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 DPYSL3Q14195 570 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 PUM1Q14671 1186 aaKnown RBP eCLIP14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 MYLK3Q32MK0 819 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 TMCO3Q6UWJ1 677 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 PLPP6Q8IY26 295 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 CCDC170Q8IYT3 715 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms