RNA–Protein interactions for RNA: ENST00000398842.7

CDH23-206, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 1,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-206ENST00000398842 KIFC1Q9BW19 673 aa23.55■■□□□ 1.36
CDH23-206ENST00000398842 FSD1LQ9BXM9 530 aa23.55■■□□□ 1.36
CDH23-206ENST00000398842 ACE2Q9BYF1 805 aaPredicted RBP23.55■■□□□ 1.36
CDH23-206ENST00000398842 ATP13A1Q9HD20 1204 aa23.55■■□□□ 1.36
CDH23-206ENST00000398842 HCFC1R1Q9NWW0 138 aa23.55■■□□□ 1.36
CDH23-206ENST00000398842 GRXCR1A8MXD5 290 aa23.54■■□□□ 1.36
CDH23-206ENST00000398842 SCAMP3O14828 347 aaKnown RBP23.54■■□□□ 1.36
CDH23-206ENST00000398842 LPXNO60711 386 aa23.54■■□□□ 1.36
CDH23-206ENST00000398842 SNRPAP09012 282 aaKnown RBP23.54■■□□□ 1.36
CDH23-206ENST00000398842 ETFBP38117 255 aa23.54■■□□□ 1.36
CDH23-206ENST00000398842 CCR2P41597 374 aa23.54■■□□□ 1.36
CDH23-206ENST00000398842 CD86P42081 329 aa23.54■■□□□ 1.36
CDH23-206ENST00000398842 ITKQ08881 620 aa23.54■■□□□ 1.36
CDH23-206ENST00000398842 MGAT5Q09328 741 aa23.54■■□□□ 1.36
CDH23-206ENST00000398842 LRRC14Q15048 493 aa23.54■■□□□ 1.36
CDH23-206ENST00000398842 SH2D5Q6ZV89 423 aa23.54■■□□□ 1.36
CDH23-206ENST00000398842 HTR3DQ70Z44 454 aa23.54■■□□□ 1.36
CDH23-206ENST00000398842 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.54■■□□□ 1.36
CDH23-206ENST00000398842 CDKL2Q92772 493 aa23.54■■□□□ 1.36
CDH23-206ENST00000398842 SERAC1Q96JX3 654 aa23.54■■□□□ 1.36
CDH23-206ENST00000398842 SLC46A2Q9BY10 475 aa23.54■■□□□ 1.36
CDH23-206ENST00000398842 RABEP2Q9H5N1 569 aa23.54■■□□□ 1.36
CDH23-206ENST00000398842 ARNT2Q9HBZ2 717 aa23.54■■□□□ 1.36
CDH23-206ENST00000398842 MAN1C1Q9NR34 630 aa23.54■■□□□ 1.36
CDH23-206ENST00000398842 CHRAC1Q9NRG0 131 aa23.54■■□□□ 1.36
CDH23-206ENST00000398842 NKIRAS1Q9NYS0 192 aa23.54■■□□□ 1.36
CDH23-206ENST00000398842 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.53■■□□□ 1.36
CDH23-206ENST00000398842 MUSKO15146 869 aa23.53■■□□□ 1.36
CDH23-206ENST00000398842 TBL1XO60907 577 aa23.53■■□□□ 1.36
CDH23-206ENST00000398842 KRT37O76014 449 aa23.53■■□□□ 1.36
CDH23-206ENST00000398842 MT-ND3P03897 115 aa23.53■■□□□ 1.36
CDH23-206ENST00000398842 SERPINB9P50453 376 aa23.53■■□□□ 1.36
CDH23-206ENST00000398842 LGSNQ5TDP6 509 aa23.53■■□□□ 1.36
CDH23-206ENST00000398842 FAM109BQ6ICB4 259 aaPredicted RBP23.53■■□□□ 1.36
CDH23-206ENST00000398842 HJURPQ8NCD3 748 aaPredicted RBP23.53■■□□□ 1.36
CDH23-206ENST00000398842 ALKBH8Q96BT7 664 aaKnown RBP23.53■■□□□ 1.36
CDH23-206ENST00000398842 MFSD3Q96ES6 412 aa23.53■■□□□ 1.36
CDH23-206ENST00000398842 SGSM3Q96HU1 749 aa23.53■■□□□ 1.36
CDH23-206ENST00000398842 SPON2Q9BUD6 331 aa23.53■■□□□ 1.36
CDH23-206ENST00000398842 LSM7Q9UK45 103 aaKnown RBP23.53■■□□□ 1.36
CDH23-206ENST00000398842 TRIM49D1C9J1S8 452 aa23.52■■□□□ 1.36
CDH23-206ENST00000398842 CLASP2O75122 1294 aaKnown RBP23.52■■□□□ 1.36
CDH23-206ENST00000398842 RFPL2O75678 378 aa23.52■■□□□ 1.36
CDH23-206ENST00000398842 NUMBP49757 651 aa23.52■■□□□ 1.36
CDH23-206ENST00000398842 OXCT1P55809 520 aa23.52■■□□□ 1.36
CDH23-206ENST00000398842 PCID2Q5JVF3 399 aa23.52■■□□□ 1.36
CDH23-206ENST00000398842 ALG1LQ6GMV1 187 aa23.52■■□□□ 1.36
CDH23-206ENST00000398842 ZNF783Q6ZMS7 281 aa23.52■■□□□ 1.36
CDH23-206ENST00000398842 POLR1EQ9GZS1 481 aaKnown RBP23.52■■□□□ 1.36
CDH23-206ENST00000398842 CFAP97Q9P2B7 532 aa23.52■■□□□ 1.36
CDH23-206ENST00000398842 HMX2A2RU54 273 aa23.52■■□□□ 1.36
CDH23-206ENST00000398842 ERICH4A6NGS2 130 aa23.52■■□□□ 1.36
CDH23-206ENST00000398842 ERVK-10P10266 1014 aa23.52■■□□□ 1.36
CDH23-206ENST00000398842 GLDCP23378 1020 aa23.52■■□□□ 1.36
CDH23-206ENST00000398842 HOXA9P31269 272 aa23.52■■□□□ 1.36
CDH23-206ENST00000398842 WDR4P57081 412 aaKnown RBP23.52■■□□□ 1.36
CDH23-206ENST00000398842 SLC18A2Q05940 514 aa23.52■■□□□ 1.36
CDH23-206ENST00000398842 ZNF235Q14590 738 aa23.52■■□□□ 1.36
CDH23-206ENST00000398842 PCSK7Q16549 785 aa23.52■■□□□ 1.36
CDH23-206ENST00000398842 RNF219Q5W0B1 726 aaPredicted RBP23.52■■□□□ 1.36
CDH23-206ENST00000398842 POTEHQ6S545 545 aa23.52■■□□□ 1.36
CDH23-206ENST00000398842 BANPQ8N9N5 519 aa23.52■■□□□ 1.36
CDH23-206ENST00000398842 SHKBP1Q8TBC3 707 aa23.52■■□□□ 1.36
CDH23-206ENST00000398842 MTBPQ96DY7 904 aa23.52■■□□□ 1.36
CDH23-206ENST00000398842 TMA16Q96EY4 203 aaKnown RBP23.52■■□□□ 1.36
CDH23-206ENST00000398842 ZNF317Q96PQ6 595 aaPredicted RBP23.52■■□□□ 1.36
CDH23-206ENST00000398842 CCT8L2Q96SF2 557 aa23.52■■□□□ 1.36
CDH23-206ENST00000398842 MLXIPLQ9NP71 852 aa23.52■■□□□ 1.36
CDH23-206ENST00000398842 IL1RAPL1Q9NZN1 696 aa23.52■■□□□ 1.36
CDH23-206ENST00000398842 SLC17A6Q9P2U8 582 aa23.52■■□□□ 1.36
CDH23-206ENST00000398842 ZNF510Q9Y2H8 683 aa23.52■■□□□ 1.36
CDH23-206ENST00000398842 ACTL7AQ9Y615 435 aa23.52■■□□□ 1.36
CDH23-206ENST00000398842 NOTCH4Q99466 2003 aa23.51■■□□□ 1.35
CDH23-206ENST00000398842 TTC24A2A3L6 582 aaPredicted RBP23.51■■□□□ 1.35
CDH23-206ENST00000398842 KRT38O76015 456 aa23.51■■□□□ 1.35
CDH23-206ENST00000398842 CA3P07451 260 aa23.51■■□□□ 1.35
CDH23-206ENST00000398842 EPCAMP16422 314 aa23.51■■□□□ 1.35
CDH23-206ENST00000398842 PTPN2P17706 415 aa23.51■■□□□ 1.35
CDH23-206ENST00000398842 NMBRP28336 390 aa23.51■■□□□ 1.35
CDH23-206ENST00000398842 GBP2P32456 591 aaPredicted RBP23.51■■□□□ 1.35
CDH23-206ENST00000398842 RPA3P35244 121 aaPredicted RBP23.51■■□□□ 1.35
CDH23-206ENST00000398842 CHRNA4P43681 627 aa23.51■■□□□ 1.35
CDH23-206ENST00000398842 SHHQ15465 462 aa23.51■■□□□ 1.35
CDH23-206ENST00000398842 PKN3Q6P5Z2 889 aa23.51■■□□□ 1.35
CDH23-206ENST00000398842 RASSF3Q86WH2 238 aa23.51■■□□□ 1.35
CDH23-206ENST00000398842 KLF6Q99612 283 aaPredicted RBP23.51■■□□□ 1.35
CDH23-206ENST00000398842 SEMA3CQ99985 751 aa23.51■■□□□ 1.35
CDH23-206ENST00000398842 DNMT3BQ9UBC3 853 aaKnown RBP23.51■■□□□ 1.35
CDH23-206ENST00000398842 UBA2Q9UBT2 640 aaPredicted RBP23.51■■□□□ 1.35
CDH23-206ENST00000398842 SH3BP1Q9Y3L3 701 aa23.51■■□□□ 1.35
CDH23-206ENST00000398842 MOSPD3O75425 235 aa23.5■■□□□ 1.35
CDH23-206ENST00000398842 LUC7L3O95232 432 aaKnown RBP23.5■■□□□ 1.35
CDH23-206ENST00000398842 FGF19O95750 216 aa23.5■■□□□ 1.35
CDH23-206ENST00000398842 FAM107AO95990 144 aa23.5■■□□□ 1.35
CDH23-206ENST00000398842 CA4P22748 312 aa23.5■■□□□ 1.35
CDH23-206ENST00000398842 CNTFP26441 200 aa23.5■■□□□ 1.35
CDH23-206ENST00000398842 RFTN1Q14699 578 aaPredicted RBP23.5■■□□□ 1.35
CDH23-206ENST00000398842 FSCBQ5H9T9 825 aa23.5■■□□□ 1.35
CDH23-206ENST00000398842 PACS1Q6VY07 963 aa23.5■■□□□ 1.35
CDH23-206ENST00000398842 KDELC2Q7Z4H8 507 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms