RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 FAXDC2Q96IV6 333 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 CSPG4P5Q96PW8 444 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 OSMRQ99650 979 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 TRMOQ9BU70 441 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 KATNAL1Q9BW62 490 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 ULBP1Q9BZM6 244 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 REXO4Q9GZR2 422 aaKnown RBP11.18□□□□□ -0.62
HPS4-202ENST00000398145 APOBEC3GQ9HC16 384 aaKnown RBP11.18□□□□□ -0.62
HPS4-202ENST00000398145 CNGB3Q9NQW8 809 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 RIMBP3CA6NJZ7 1639 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 RIMBP3BA6NNM3 1639 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 RIMBP3Q9UFD9 1639 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 LZTS3O60299 673 aaPredicted RBP11.18□□□□□ -0.62
HPS4-202ENST00000398145 CSH1P0DML2 217 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 CSH2P0DML3 217 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 CETPP11597 493 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 MAPK1P28482 360 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 MOGSQ13724 837 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 ADGRE1Q14246 886 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 TCEAL1Q15170 157 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 ARMC3Q5W041 872 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 EEF1DP3Q658K8 133 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 GK5Q6ZS86 529 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 FAM228AQ86W67 206 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 UBR7Q8N806 425 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 ZNF781Q8N8C0 355 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 MTERF3Q96E29 417 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 PAWRQ96IZ0 340 aaKnown RBP11.18□□□□□ -0.62
HPS4-202ENST00000398145 ZNF512Q96ME7 567 aaPredicted RBP11.18□□□□□ -0.62
HPS4-202ENST00000398145 CLPBQ9H078 707 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 SPATC1LQ9H0A9 340 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 RIBC2Q9H4K1 309 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 MYH6P13533 1939 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 B4GALT4O60513 344 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 RECQL5O94762 991 aaPredicted RBP11.18□□□□□ -0.62
HPS4-202ENST00000398145 TSPAN8P19075 237 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 TUBP50607 506 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 GPX6P59796 221 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 FSTL1Q12841 308 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 RALGDSQ12967 914 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 MAD2L1Q13257 205 aaPredicted RBP11.18□□□□□ -0.62
HPS4-202ENST00000398145 DDX39BQ13838 428 aaKnown RBP11.18□□□□□ -0.62
HPS4-202ENST00000398145 CLYBLQ8N0X4 340 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 SPATA6LQ8N4H0 392 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 FBXO30Q8TB52 745 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 STAG3L4Q8TBR4 150 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 HOPXQ9BPY8 73 aaPredicted RBP11.18□□□□□ -0.62
HPS4-202ENST00000398145 TRIM45Q9H8W5 580 aaPredicted RBP11.18□□□□□ -0.62
HPS4-202ENST00000398145 ACTR8Q9H981 624 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 DOLKQ9UPQ8 538 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 TYROBPO43914 113 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 TADA2AO75478 443 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 SEC24AO95486 1093 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 COL6A2P12110 1019 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 TM4SF1P30408 202 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 MATKP42679 507 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 SERPINH1P50454 418 aaKnown RBP11.17□□□□□ -0.62
HPS4-202ENST00000398145 CCNG1P51959 295 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 EML3Q32P44 896 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 ZNF772Q68DY9 489 aaPredicted RBP11.17□□□□□ -0.62
HPS4-202ENST00000398145 SPESP1Q6UW49 350 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 LCLAT1Q6UWP7 414 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 TFAP2BQ92481 460 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 OTULINQ96BN8 352 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 COX4I2Q96KJ9 171 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 HGH1Q9BTY7 390 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 OSBPL6Q9BZF3 934 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 ADAM7Q9H2U9 754 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 CXorf21Q9HAI6 301 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 SEMA4BQ9NPR2 832 aaPredicted RBP11.17□□□□□ -0.62
HPS4-202ENST00000398145 C8orf4Q9NR00 106 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 CDH9Q9ULB4 789 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 TRAF6Q9Y4K3 522 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 DUOX1Q9NRD9 1551 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 WNT10BO00744 389 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 AKAP5P24588 427 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 LIMK2P53671 638 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 CXCL9Q07325 125 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 INAQ16352 499 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 TBC1D21Q8IYX1 336 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 ZNF513Q8N8E2 541 aaPredicted RBP11.17□□□□□ -0.62
HPS4-202ENST00000398145 S100ZQ8WXG8 99 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 PANX3Q96QZ0 392 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 TBCDQ9BTW9 1192 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 UNC93B1Q9H1C4 597 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 TMEM165Q9HC07 324 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 LTN1O94822 1766 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 SPATA31C2B4DYI2 1134 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 MATN2O00339 956 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 BTN3A1O00481 513 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 ATP6V1G1O75348 118 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 H6PDO95479 791 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 KRT6AP02538 564 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 KRT6BP04259 564 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 RXRBP28702 533 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 KRT6CP48668 564 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 HARS2P49590 506 aaKnown RBP11.17□□□□□ -0.62
HPS4-202ENST00000398145 PRKG2Q13237 762 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 ZNF846Q147U1 533 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 PGS1Q32NB8 556 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms