RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 POLR1BQ9H9Y6 1135 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 DYRK4Q9NR20 520 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 SORCS3Q9UPU3 1222 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 TNFSF13BQ9Y275 285 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 GNG14A0A1W2PPG7 69 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 NFKBIEO00221 500 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 AHCYL1O43865 530 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 RHOCP08134 193 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 EPB42P16452 691 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 CCNG1P51959 295 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 TBX4P57082 545 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 RHOAP61586 193 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 CSTF3Q12996 717 aaKnown RBP10.89□□□□□ -0.67
CCDC40-204ENST00000397545 ITGADQ13349 1161 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 RNASEH2BQ5TBB1 312 aaKnown RBP10.89□□□□□ -0.67
CCDC40-204ENST00000397545 UGT3A1Q6NUS8 523 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 TRAF7Q6Q0C0 670 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 PLD5Q8N7P1 536 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 NKD2Q969F2 451 aaPredicted RBP10.89□□□□□ -0.67
CCDC40-204ENST00000397545 TMEM109Q9BVC6 243 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 SCUBE2Q9NQ36 999 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 FBXO5Q9UKT4 447 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 HBS1LQ9Y450 684 aaKnown RBP10.89□□□□□ -0.67
CCDC40-204ENST00000397545 MOXD2PA6NHM9 499 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 C9JVG2 144 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 HNRNPRO43390 633 aaKnown RBP10.89□□□□□ -0.67
CCDC40-204ENST00000397545 SEC22BO75396 215 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 MAFO75444 373 aaPredicted RBP10.89□□□□□ -0.67
CCDC40-204ENST00000397545 C4BPAP04003 597 aaKnown RBP10.89□□□□□ -0.67
CCDC40-204ENST00000397545 ADORA2AP29274 412 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 ADSSP30520 456 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 NOMO1Q15155 1222 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 TRMT10BQ6PF06 316 aaKnown RBP10.89□□□□□ -0.67
CCDC40-204ENST00000397545 CDCA5Q96FF9 252 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 HGH1Q9BTY7 390 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 APOBEC3GQ9HC16 384 aaKnown RBP10.89□□□□□ -0.67
CCDC40-204ENST00000397545 SH3BP4Q9P0V3 963 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 PRKAG2Q9UGJ0 569 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 COL4A5P29400 1685 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 SNRPB2P08579 225 aaKnown RBP10.88□□□□□ -0.67
CCDC40-204ENST00000397545 FCGR1AP12314 374 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 MYL4P12829 197 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 WEE1P30291 646 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 SLC7A2P52569 658 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 SLC16A1P53985 500 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 KLF10Q13118 480 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 PLEKHH3Q7Z736 793 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 ZDHHC13Q8IUH4 622 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 TNIP2Q8NFZ5 429 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 RIBC2Q9H4K1 309 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 ARMC7Q9H6L4 198 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 GOLGA2P5Q9HBQ8 144 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 COMMD8Q9NX08 183 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 RRN3Q9NYV6 651 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 POLG2Q9UHN1 485 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 TCF4P15884 667 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 ARF4P18085 180 aaPredicted RBP10.88□□□□□ -0.67
CCDC40-204ENST00000397545 GABRB2P47870 512 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 EIF2B2P49770 351 aaKnown RBP10.88□□□□□ -0.67
CCDC40-204ENST00000397545 BEX3Q00994 111 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 RALGPS1Q5JS13 557 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 PERM1Q5SV97 790 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 TXNRD3NBQ6F5E7 133 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 OR8H2Q8N162 312 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 PQLC1Q8N2U9 271 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.88□□□□□ -0.67
CCDC40-204ENST00000397545 GLIS1Q8NBF1 620 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 ITFG1Q8TB96 612 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 OSCP1Q8WVF1 389 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 MTERF3Q96E29 417 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 OTUB1Q96FW1 271 aaPredicted RBP10.88□□□□□ -0.67
CCDC40-204ENST00000397545 ZNF670Q9BS34 389 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 PRKD2Q9BZL6 878 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 STXBP5LQ9Y2K9 1186 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 SNCAIPQ9Y6H5 919 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 CFHP08603 1231 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 ATP5F1P24539 256 aaPredicted RBP10.88□□□□□ -0.67
CCDC40-204ENST00000397545 PBLDP30039 288 aaPredicted RBP10.88□□□□□ -0.67
CCDC40-204ENST00000397545 CD86P42081 329 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 RALGDSQ12967 914 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 BLMHQ13867 455 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 POLD3Q15054 466 aaPredicted RBP10.88□□□□□ -0.67
CCDC40-204ENST00000397545 IL27RAQ6UWB1 636 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 MTMR14Q8NCE2 650 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 FAM156AQ8NDB6 213 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 MTFMTQ96DP5 389 aaKnown RBP10.88□□□□□ -0.67
CCDC40-204ENST00000397545 SERAC1Q96JX3 654 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 EXOC2Q96KP1 924 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 MRPL45Q9BRJ2 306 aaKnown RBP10.88□□□□□ -0.67
CCDC40-204ENST00000397545 C6orf62Q9GZU0 229 aaPredicted RBP10.88□□□□□ -0.67
CCDC40-204ENST00000397545 DMAP1Q9NPF5 467 aaPredicted RBP10.88□□□□□ -0.67
CCDC40-204ENST00000397545 RAP2CQ9Y3L5 183 aa10.88□□□□□ -0.67
CCDC40-204ENST00000397545 GREB1LQ9C091 1923 aaPredicted RBP10.88□□□□□ -0.67
CCDC40-204ENST00000397545 KIAA0100Q14667 2235 aaKnown RBP10.88□□□□□ -0.67
CCDC40-204ENST00000397545 PRR23AA6NEV1 266 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 IRF6O14896 467 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 GPR182O15218 404 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 CAPN15O75808 1086 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 ALDH1A1P00352 501 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 MT-ND1P03886 318 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms