RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 CSPG4P5Q96PW8 444 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 KCNK16Q96T55 309 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 FERMT1Q9BQL6 677 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 RHOBTB2Q9BYZ6 727 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 EHD1Q9H4M9 534 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 CLK4Q9HAZ1 481 aaKnown RBP5.1□□□□□ -1.59
SSR1-202ENST00000397511 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.1□□□□□ -1.595e-7■■■□□ 18
SSR1-202ENST00000397511 RNF181Q9P0P0 153 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 SATB2Q9UPW6 733 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 DNAJC16Q9Y2G8 782 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 RBMX2Q9Y388 322 aaKnown RBP5.1□□□□□ -1.59
SSR1-202ENST00000397511 FIS1Q9Y3D6 152 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 A0A0G2JLL6 359 aaPredicted RBP5.1□□□□□ -1.59
SSR1-202ENST00000397511 MYOCOSA0A1B0GUC4 107 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 TRIM64CA6NLI5 447 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 NOTOA8MTQ0 251 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 FAM72CH0Y354 149 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 XPO1O14980 1071 aaKnown RBP5.1□□□□□ -1.59
SSR1-202ENST00000397511 FBXO21O94952 628 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 KRT75O95678 551 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 C1QAP02745 245 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 ALDOAP04075 364 aaKnown RBP5.1□□□□□ -1.59
SSR1-202ENST00000397511 MCF2P10911 925 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 TYK2P29597 1187 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 AVPR1AP37288 418 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 ARL4AP40617 200 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 MAP3K7CLP57077 242 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 TNFAIP2Q03169 654 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 KCNC4Q03721 635 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 TAZQ16635 292 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 TRIM16LQ309B1 348 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 FAM209AQ5JX71 171 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 LGSNQ5TDP6 509 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 FAM72AQ5TYM5 149 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 NCBP2-AS2Q69YL0 99 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 FAM72DQ6L9T8 149 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 OGFOD2Q6N063 350 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 DCLRE1AQ6PJP8 1040 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 GPR141Q7Z602 305 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 PRRT2Q7Z6L0 340 aaPredicted RBP5.1□□□□□ -1.59
SSR1-202ENST00000397511 PIGZQ86VD9 579 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 FAM72BQ86X60 149 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 TMEM126BQ8IUX1 230 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 LRRC49Q8IUZ0 686 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 C10orf107Q8IVU9 208 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 TTC39CQ8N584 583 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 TMCO5AQ8N6Q1 288 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 RNF169Q8NCN4 708 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 OR52K1Q8NGK4 314 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 P2RY11Q96G91 374 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 CELF6Q96J87 481 aaKnown RBP5.1□□□□□ -1.59
SSR1-202ENST00000397511 EBNA1BP2Q99848 306 aaKnown RBP5.1□□□□□ -1.59
SSR1-202ENST00000397511 CTRCQ99895 268 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 C16orf70Q9BSU1 422 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 MED10Q9BTT4 135 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 ASB7Q9H672 318 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 SYBUQ9NX95 663 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 MTMR10Q9NXD2 777 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 RABL2AQ9UBK7 228 aaPredicted RBP5.1□□□□□ -1.59
SSR1-202ENST00000397511 PSMD13Q9UNM6 376 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 SORCS3Q9UPU3 1222 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 ERVK-11Q9UQG0 969 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 VCANP13611 3396 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 SF3B1O75533 1304 aaKnown RBP eCLIP5.1□□□□□ -1.591e-7■■■■■ 55.1
SSR1-202ENST00000397511 ZNF701M0R085 212 aaPredicted RBP5.1□□□□□ -1.59
SSR1-202ENST00000397511 RNF103O00237 685 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 KPNA4O00629 521 aaPredicted RBP5.1□□□□□ -1.59
SSR1-202ENST00000397511 KLHL41O60662 606 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 ENDOD1O94919 500 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 SERPINA6P08185 405 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 DHRS4L1P0CG22 281 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 PSMC3P17980 439 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 JAK1P23458 1154 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 HOXA11P31270 313 aaPredicted RBP5.1□□□□□ -1.59
SSR1-202ENST00000397511 ARRB2P32121 409 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 KPNA1P52294 538 aaPredicted RBP5.1□□□□□ -1.59
SSR1-202ENST00000397511 IRF9Q00978 393 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 SLC18A2Q05940 514 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 SOX4Q06945 474 aaPredicted RBP5.1□□□□□ -1.59
SSR1-202ENST00000397511 E2F2Q14209 437 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 PDK2Q15119 407 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 STILQ15468 1287 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 KCNJ8Q15842 424 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 MARCH8Q5T0T0 291 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 TAPT1Q6NXT6 567 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 VASH1Q7L8A9 365 aaPredicted RBP5.1□□□□□ -1.59
SSR1-202ENST00000397511 ERO1BQ86YB8 467 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 CLVS1Q8IUQ0 354 aaPredicted RBP5.1□□□□□ -1.59
SSR1-202ENST00000397511 PLD6Q8N2A8 252 aaKnown RBP5.1□□□□□ -1.59
SSR1-202ENST00000397511 ACVR1CQ8NER5 493 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 SLC7A14Q8TBB6 771 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 CALML6Q8TD86 181 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 HASPINQ8TF76 798 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 TFB1MQ8WVM0 346 aaKnown RBP5.1□□□□□ -1.59
SSR1-202ENST00000397511 MFSD3Q96ES6 412 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 MARK4Q96L34 752 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 DCBLD2Q96PD2 775 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 RANBP9Q96S59 729 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 DCUN1D5Q9BTE7 237 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 CCDC106Q9BWC9 280 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms