RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 GBP5Q96PP8 586 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 BRD8Q9H0E9 1235 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 J3KR12 359 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 HLA-DQB2P05538 268 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 KIF19Q2TAC6 998 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 CCDC153Q494R4 210 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 RASIP1Q5U651 963 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 MARC1Q5VT66 337 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 KIAA1841Q6NSI8 718 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 SH2D5Q6ZV89 423 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 FSTL5Q8N475 847 aaPredicted RBP10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 TTC9BQ8N6N2 239 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 PCDH20Q8N6Y1 951 aaKnown RBP10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 ZNF512Q96ME7 567 aaPredicted RBP10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 CDRT15Q96T59 188 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 NMUR1Q9HB89 426 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 GLOD4Q9HC38 313 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 GMIPQ9P107 970 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 PTCH2Q9Y6C5 1203 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 USP3Q9Y6I4 520 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 TTC3P53804 2025 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 CCDC166P0CW27 439 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 CCND3P30281 292 aaPredicted RBP10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 TAS2R39P59534 338 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 CST9Q5W186 159 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 CNSTQ6PJW8 725 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 OR52K2Q8NGK3 314 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 RSPH1Q8WYR4 309 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 KCTD13Q8WZ19 329 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 PPWD1Q96BP3 646 aaKnown RBP10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 MIEF2Q96C03 454 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 SLC2A13Q96QE2 648 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 POMKQ9H5K3 350 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 ABCC13Q9NSE7 274 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 PPM1HQ9ULR3 514 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 ARHGAP26Q9UNA1 814 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 CDYLQ9Y232 598 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 GIT1Q9Y2X7 761 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 DUSP11O75319 330 aaKnown RBP10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 TOMM70O94826 608 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 DDHD2O94830 711 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 ARSAP15289 507 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 LRPAP1P30533 357 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 OR1E1P30953 314 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 CD151P48509 253 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 GEMP55040 296 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 NIPAL4Q0D2K0 466 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 TUSC3Q13454 348 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 GALNT3Q14435 633 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 PCBP1Q15365 356 aaKnown RBP eCLIP10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 UPP1Q16831 310 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 PCID2Q5JVF3 399 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 KLC3Q6P597 504 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 DCLRE1AQ6PJP8 1040 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 DDIASQ8IXT1 998 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 MAPK15Q8TD08 544 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 ACMSDQ8TDX5 336 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 NAT14Q8WUY8 206 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 TRIB2Q92519 343 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 PANX3Q96QZ0 392 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 CCDC68Q9H2F9 335 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 ALG9Q9H6U8 611 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 SMPD4Q9NXE4 827 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 PCDH10Q9P2E7 1040 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 LNPEPQ9UIQ6 1025 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 FBXO5Q9UKT4 447 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 KCTD3Q9Y597 815 aa10.58□□□□□ -0.72
CPSF1P1-201ENST00000397477 BRCA2P51587 3418 aa10.57□□□□□ -0.72
CPSF1P1-201ENST00000397477 TRIP12Q14669 1992 aaPredicted RBP10.57□□□□□ -0.72
CPSF1P1-201ENST00000397477 MANSC4A6NHS7 340 aaPredicted RBP10.57□□□□□ -0.72
CPSF1P1-201ENST00000397477 E9PAM4 449 aa10.57□□□□□ -0.72
CPSF1P1-201ENST00000397477 CNTN5O94779 1100 aa10.57□□□□□ -0.72
CPSF1P1-201ENST00000397477 COX4I1P13073 169 aa10.57□□□□□ -0.72
CPSF1P1-201ENST00000397477 ANPEPP15144 967 aa10.57□□□□□ -0.72
CPSF1P1-201ENST00000397477 KRT72Q14CN4 511 aa10.57□□□□□ -0.72
CPSF1P1-201ENST00000397477 FRMD7Q6ZUT3 714 aa10.57□□□□□ -0.72
CPSF1P1-201ENST00000397477 MYLK4Q86YV6 388 aaPredicted RBP10.57□□□□□ -0.72
CPSF1P1-201ENST00000397477 SH3TC2Q8TF17 1288 aa10.57□□□□□ -0.72
CPSF1P1-201ENST00000397477 HDAC10Q969S8 669 aa10.57□□□□□ -0.72
CPSF1P1-201ENST00000397477 PSMG2Q969U7 264 aa10.57□□□□□ -0.72
CPSF1P1-201ENST00000397477 C11orf84Q9BUA3 381 aaPredicted RBP10.57□□□□□ -0.72
CPSF1P1-201ENST00000397477 ZCWPW1Q9H0M4 648 aa10.57□□□□□ -0.72
CPSF1P1-201ENST00000397477 CCDC167Q9P0B6 97 aa10.57□□□□□ -0.72
CPSF1P1-201ENST00000397477 DNAJB4Q9UDY4 337 aa10.57□□□□□ -0.72
CPSF1P1-201ENST00000397477 STX16-NPEPL1H3BU86 382 aa10.57□□□□□ -0.72
CPSF1P1-201ENST00000397477 MPOP05164 745 aa10.57□□□□□ -0.72
CPSF1P1-201ENST00000397477 CCNFP41002 786 aa10.57□□□□□ -0.72
CPSF1P1-201ENST00000397477 SLC1A2P43004 574 aa10.57□□□□□ -0.72
CPSF1P1-201ENST00000397477 SCNN1BP51168 640 aa10.57□□□□□ -0.72
CPSF1P1-201ENST00000397477 FCGRTP55899 365 aa10.57□□□□□ -0.72
CPSF1P1-201ENST00000397477 MRPS22P82650 360 aaKnown RBP10.57□□□□□ -0.72
CPSF1P1-201ENST00000397477 UGP2Q16851 508 aa10.57□□□□□ -0.72
CPSF1P1-201ENST00000397477 MORN1Q5T089 497 aa10.57□□□□□ -0.72
CPSF1P1-201ENST00000397477 RBM20Q5T481 1227 aaKnown RBP10.57□□□□□ -0.72
CPSF1P1-201ENST00000397477 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.57□□□□□ -0.72
CPSF1P1-201ENST00000397477 RCN3Q96D15 328 aa10.57□□□□□ -0.72
CPSF1P1-201ENST00000397477 GLT1D1Q96MS3 346 aa10.57□□□□□ -0.72
CPSF1P1-201ENST00000397477 CDH19Q9H159 772 aa10.57□□□□□ -0.72
CPSF1P1-201ENST00000397477 UTP6Q9NYH9 597 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms