RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 FNTAP49354 379 aa23.99■■□□□ 1.43
TSPAN4-203ENST00000397397 C2orf54Q08AI8 447 aa23.99■■□□□ 1.43
TSPAN4-203ENST00000397397 TEX44Q53QW1 395 aa23.99■■□□□ 1.43
TSPAN4-203ENST00000397397 SDE2Q6IQ49 451 aa23.99■■□□□ 1.43
TSPAN4-203ENST00000397397 GSTA5Q7RTV2 222 aa23.99■■□□□ 1.43
TSPAN4-203ENST00000397397 ZNF572Q7Z3I7 529 aaPredicted RBP23.99■■□□□ 1.43
TSPAN4-203ENST00000397397 KLHL7Q8IXQ5 586 aa23.99■■□□□ 1.43
TSPAN4-203ENST00000397397 CCDC105Q8IYK2 499 aa23.99■■□□□ 1.43
TSPAN4-203ENST00000397397 PCDH20Q8N6Y1 951 aaKnown RBP23.99■■□□□ 1.43
TSPAN4-203ENST00000397397 IL17RCQ8NAC3 791 aa23.99■■□□□ 1.43
TSPAN4-203ENST00000397397 TSEN2Q8NCE0 465 aaKnown RBP23.99■■□□□ 1.43
TSPAN4-203ENST00000397397 ATL2Q8NHH9 583 aa23.99■■□□□ 1.43
TSPAN4-203ENST00000397397 FRS2Q8WU20 508 aa23.99■■□□□ 1.43
TSPAN4-203ENST00000397397 ISG20Q96AZ6 181 aaKnown RBP23.99■■□□□ 1.43
TSPAN4-203ENST00000397397 OSBPL6Q9BZF3 934 aa23.99■■□□□ 1.43
TSPAN4-203ENST00000397397 TNKS2Q9H2K2 1166 aa23.99■■□□□ 1.43
TSPAN4-203ENST00000397397 KLHL8Q9P2G9 620 aaPredicted RBP23.99■■□□□ 1.43
TSPAN4-203ENST00000397397 LHX3Q9UBR4 397 aa23.99■■□□□ 1.43
TSPAN4-203ENST00000397397 RAPGEFL1Q9UHV5 662 aa23.99■■□□□ 1.43
TSPAN4-203ENST00000397397 TMEM221A6NGB7 291 aa23.98■■□□□ 1.43
TSPAN4-203ENST00000397397 M0R296 226 aa23.98■■□□□ 1.43
TSPAN4-203ENST00000397397 HLA-DQB2P05538 268 aa23.98■■□□□ 1.43
TSPAN4-203ENST00000397397 STIP1P31948 543 aaKnown RBP23.98■■□□□ 1.43
TSPAN4-203ENST00000397397 NRLP54845 237 aa23.98■■□□□ 1.43
TSPAN4-203ENST00000397397 GDF10P55107 478 aa23.98■■□□□ 1.43
TSPAN4-203ENST00000397397 LMNB2Q03252 620 aa23.98■■□□□ 1.43
TSPAN4-203ENST00000397397 FZD5Q13467 585 aa23.98■■□□□ 1.43
TSPAN4-203ENST00000397397 ENPP2Q13822 863 aa23.98■■□□□ 1.43
TSPAN4-203ENST00000397397 TXNDC5Q8NBS9 432 aaKnown RBP23.98■■□□□ 1.43
TSPAN4-203ENST00000397397 ZNF419Q96HQ0 510 aaPredicted RBP23.98■■□□□ 1.43
TSPAN4-203ENST00000397397 AGAP3Q96P47 875 aa23.98■■□□□ 1.43
TSPAN4-203ENST00000397397 PSKH2Q96QS6 385 aa23.98■■□□□ 1.43
TSPAN4-203ENST00000397397 VAT1Q99536 393 aa23.98■■□□□ 1.43
TSPAN4-203ENST00000397397 TM6SF2Q9BZW4 377 aa23.98■■□□□ 1.43
TSPAN4-203ENST00000397397 MTG2Q9H4K7 406 aa23.98■■□□□ 1.43
TSPAN4-203ENST00000397397 HAUS2Q9NVX0 235 aa23.98■■□□□ 1.43
TSPAN4-203ENST00000397397 SUN2Q9UH99 717 aa23.98■■□□□ 1.43
TSPAN4-203ENST00000397397 TTLL3Q9Y4R7 772 aa23.98■■□□□ 1.43
TSPAN4-203ENST00000397397 TRIOO75962 3097 aa23.97■■□□□ 1.43
TSPAN4-203ENST00000397397 EDDM13A0A1B0GTR0 161 aa23.97■■□□□ 1.43
TSPAN4-203ENST00000397397 BNIP3LO60238 219 aa23.97■■□□□ 1.43
TSPAN4-203ENST00000397397 ZNF821O75541 412 aaPredicted RBP23.97■■□□□ 1.43
TSPAN4-203ENST00000397397 PDGFBP01127 241 aaPredicted RBP23.97■■□□□ 1.43
TSPAN4-203ENST00000397397 IFNB1P01574 187 aa23.97■■□□□ 1.43
TSPAN4-203ENST00000397397 EPHX1P07099 455 aa23.97■■□□□ 1.43
TSPAN4-203ENST00000397397 HSPA9P38646 679 aaKnown RBP23.97■■□□□ 1.43
TSPAN4-203ENST00000397397 ITKQ08881 620 aa23.97■■□□□ 1.43
TSPAN4-203ENST00000397397 HNRNPA1L2Q32P51 320 aaKnown RBP23.97■■□□□ 1.43
TSPAN4-203ENST00000397397 HSF5Q4G112 596 aaPredicted RBP23.97■■□□□ 1.43
TSPAN4-203ENST00000397397 Q6ZS52 159 aa23.97■■□□□ 1.43
TSPAN4-203ENST00000397397 Q6ZVU0 165 aa23.97■■□□□ 1.43
TSPAN4-203ENST00000397397 ZNF567Q8N184 647 aa23.97■■□□□ 1.43
TSPAN4-203ENST00000397397 PGBD5Q8N414 524 aa23.97■■□□□ 1.43
TSPAN4-203ENST00000397397 CNTD1Q8N815 330 aa23.97■■□□□ 1.43
TSPAN4-203ENST00000397397 MNS1Q8NEH6 495 aa23.97■■□□□ 1.43
TSPAN4-203ENST00000397397 EXOC2Q96KP1 924 aa23.97■■□□□ 1.43
TSPAN4-203ENST00000397397 AMACRQ9UHK6 382 aa23.97■■□□□ 1.43
TSPAN4-203ENST00000397397 ATP8A1Q9Y2Q0 1164 aa23.97■■□□□ 1.43
TSPAN4-203ENST00000397397 SIT1Q9Y3P8 196 aa23.97■■□□□ 1.43
TSPAN4-203ENST00000397397 C5orf60A6NFR6 353 aa23.96■■□□□ 1.43
TSPAN4-203ENST00000397397 MUSKO15146 869 aa23.96■■□□□ 1.43
TSPAN4-203ENST00000397397 MAXP61244 160 aa23.96■■□□□ 1.43
TSPAN4-203ENST00000397397 CARD16Q5EG05 197 aa23.96■■□□□ 1.43
TSPAN4-203ENST00000397397 ATXN7L2Q5T6C5 722 aaPredicted RBP23.96■■□□□ 1.43
TSPAN4-203ENST00000397397 PID1Q7Z2X4 250 aa23.96■■□□□ 1.43
TSPAN4-203ENST00000397397 CCDC89Q8N998 374 aa23.96■■□□□ 1.43
TSPAN4-203ENST00000397397 GRK7Q8WTQ7 553 aa23.96■■□□□ 1.43
TSPAN4-203ENST00000397397 TEKT5Q96M29 485 aa23.96■■□□□ 1.43
TSPAN4-203ENST00000397397 KRT12Q99456 494 aa23.96■■□□□ 1.43
TSPAN4-203ENST00000397397 GABRG3Q99928 467 aa23.96■■□□□ 1.43
TSPAN4-203ENST00000397397 FEZ2Q9UHY8 353 aaPredicted RBP23.96■■□□□ 1.43
TSPAN4-203ENST00000397397 TRHDEQ9UKU6 1024 aa23.96■■□□□ 1.43
TSPAN4-203ENST00000397397 ZBTB24O43167 697 aaPredicted RBP23.95■■□□□ 1.42
TSPAN4-203ENST00000397397 ADAM23O75077 832 aa23.95■■□□□ 1.42
TSPAN4-203ENST00000397397 IGSF6O95976 241 aa23.95■■□□□ 1.42
TSPAN4-203ENST00000397397 GSRP00390 522 aa23.95■■□□□ 1.42
TSPAN4-203ENST00000397397 COL9A1P20849 921 aa23.95■■□□□ 1.42
TSPAN4-203ENST00000397397 RECQLP46063 649 aaPredicted RBP23.95■■□□□ 1.42
TSPAN4-203ENST00000397397 RGRP47804 291 aa23.95■■□□□ 1.42
TSPAN4-203ENST00000397397 SNRPD1P62314 119 aaKnown RBP23.95■■□□□ 1.42
TSPAN4-203ENST00000397397 EOGTQ5NDL2 527 aa23.95■■□□□ 1.42
TSPAN4-203ENST00000397397 ANKRD20A2Q5SQ80 823 aa23.95■■□□□ 1.42
TSPAN4-203ENST00000397397 ANKRD20A1Q5TYW2 823 aa23.95■■□□□ 1.42
TSPAN4-203ENST00000397397 ANKRD20A3Q5VUR7 823 aa23.95■■□□□ 1.42
TSPAN4-203ENST00000397397 PKN3Q6P5Z2 889 aa23.95■■□□□ 1.42
TSPAN4-203ENST00000397397 RYBPQ8N488 228 aaPredicted RBP23.95■■□□□ 1.42
TSPAN4-203ENST00000397397 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.95■■□□□ 1.42
TSPAN4-203ENST00000397397 CEP112Q8N8E3 955 aa23.95■■□□□ 1.42
TSPAN4-203ENST00000397397 OR2AP1Q8NGE2 309 aa23.95■■□□□ 1.42
TSPAN4-203ENST00000397397 CCDC110Q8TBZ0 833 aa23.95■■□□□ 1.42
TSPAN4-203ENST00000397397 PTPRN2Q92932 1015 aa23.95■■□□□ 1.42
TSPAN4-203ENST00000397397 CLDN23Q96B33 292 aa23.95■■□□□ 1.42
TSPAN4-203ENST00000397397 RTP4Q96DX8 246 aa23.95■■□□□ 1.42
TSPAN4-203ENST00000397397 GDAP1L1Q96MZ0 367 aa23.95■■□□□ 1.42
TSPAN4-203ENST00000397397 SPATA13Q96N96 652 aa23.95■■□□□ 1.42
TSPAN4-203ENST00000397397 RUNDC3BQ96NL0 473 aa23.95■■□□□ 1.42
TSPAN4-203ENST00000397397 MGME1Q9BQP7 344 aa23.95■■□□□ 1.42
TSPAN4-203ENST00000397397 TARSL2A2RTX5 802 aaKnown RBP23.94■■□□□ 1.42
TSPAN4-203ENST00000397397 SYNCRIPO60506 623 aaKnown RBP23.94■■□□□ 1.42
TSPAN4-203ENST00000397397 SIN3BO75182 1162 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms