RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 NPY2RP49146 381 aa13.82□□□□□ -0.2
MCF2L-209ENST00000397036 PDIA2Q13087 525 aaKnown RBP13.82□□□□□ -0.2
MCF2L-209ENST00000397036 ZNF235Q14590 738 aa13.82□□□□□ -0.2
MCF2L-209ENST00000397036 CYTH1Q15438 398 aa13.82□□□□□ -0.2
MCF2L-209ENST00000397036 MSS51Q4VC12 460 aa13.82□□□□□ -0.2
MCF2L-209ENST00000397036 CCDC38Q502W7 563 aa13.82□□□□□ -0.2
MCF2L-209ENST00000397036 PRPF38BQ5VTL8 546 aaKnown RBP13.82□□□□□ -0.2
MCF2L-209ENST00000397036 RANBP10Q6VN20 620 aa13.82□□□□□ -0.2
MCF2L-209ENST00000397036 CYS1Q717R9 158 aa13.82□□□□□ -0.2
MCF2L-209ENST00000397036 PRPF39Q86UA1 669 aaKnown RBP13.82□□□□□ -0.2
MCF2L-209ENST00000397036 PGBD5Q8N414 524 aa13.82□□□□□ -0.2
MCF2L-209ENST00000397036 TAB3Q8N5C8 712 aaPredicted RBP13.82□□□□□ -0.2
MCF2L-209ENST00000397036 TTC16Q8NEE8 873 aa13.82□□□□□ -0.2
MCF2L-209ENST00000397036 SIGLEC10Q96LC7 697 aa13.82□□□□□ -0.2
MCF2L-209ENST00000397036 XPO6Q96QU8 1125 aaKnown RBP13.82□□□□□ -0.2
MCF2L-209ENST00000397036 TMEM109Q9BVC6 243 aa13.82□□□□□ -0.2
MCF2L-209ENST00000397036 NT5MQ9NPB1 228 aa13.82□□□□□ -0.2
MCF2L-209ENST00000397036 PLK2Q9NYY3 685 aa13.82□□□□□ -0.2
MCF2L-209ENST00000397036 CD207Q9UJ71 328 aa13.82□□□□□ -0.2
MCF2L-209ENST00000397036 INTS6Q9UL03 887 aaKnown RBP13.82□□□□□ -0.2
MCF2L-209ENST00000397036 NFS1Q9Y697 457 aa13.82□□□□□ -0.2
MCF2L-209ENST00000397036 DOCK8Q8NF50 2099 aa13.81□□□□□ -0.2
MCF2L-209ENST00000397036 MAGEB16A2A368 324 aa13.81□□□□□ -0.2
MCF2L-209ENST00000397036 SDR42E2A6NKP2 422 aa13.81□□□□□ -0.2
MCF2L-209ENST00000397036 NEDD8-MDP1E9PL57 170 aa13.81□□□□□ -0.2
MCF2L-209ENST00000397036 GOLGA8MH3BSY2 632 aa13.81□□□□□ -0.2
MCF2L-209ENST00000397036 SNAP91O60641 907 aa13.81□□□□□ -0.2
MCF2L-209ENST00000397036 SPAG6O75602 509 aa13.81□□□□□ -0.2
MCF2L-209ENST00000397036 CISD3P0C7P0 127 aa13.81□□□□□ -0.2
MCF2L-209ENST00000397036 ADH5P11766 374 aa13.81□□□□□ -0.2
MCF2L-209ENST00000397036 PABPC1P11940 636 aaKnown RBP13.81□□□□□ -0.2
MCF2L-209ENST00000397036 IGFBP4P22692 258 aa13.81□□□□□ -0.2
MCF2L-209ENST00000397036 CD70P32970 193 aa13.81□□□□□ -0.2
MCF2L-209ENST00000397036 NIPAL4Q0D2K0 466 aa13.81□□□□□ -0.2
MCF2L-209ENST00000397036 NR1H3Q13133 447 aa13.81□□□□□ -0.2
MCF2L-209ENST00000397036 PITRM1Q5JRX3 1037 aa13.81□□□□□ -0.2
MCF2L-209ENST00000397036 KDELC1Q6UW63 502 aa13.81□□□□□ -0.2
MCF2L-209ENST00000397036 VITQ6UXI7 678 aa13.81□□□□□ -0.2
MCF2L-209ENST00000397036 MTSS1LQ765P7 747 aa13.81□□□□□ -0.2
MCF2L-209ENST00000397036 CROCCP2Q86T23 111 aa13.81□□□□□ -0.2
MCF2L-209ENST00000397036 ETFBKMTQ8IXQ9 262 aa13.81□□□□□ -0.2
MCF2L-209ENST00000397036 APCDD1Q8J025 514 aa13.81□□□□□ -0.2
MCF2L-209ENST00000397036 WFIKKN2Q8TEU8 576 aa13.81□□□□□ -0.2
MCF2L-209ENST00000397036 PYROXD1Q8WU10 500 aa13.81□□□□□ -0.2
MCF2L-209ENST00000397036 UBLCP1Q8WVY7 318 aaPredicted RBP13.81□□□□□ -0.2
MCF2L-209ENST00000397036 TTC17Q96AE7 1141 aa13.81□□□□□ -0.2
MCF2L-209ENST00000397036 ISG20Q96AZ6 181 aaKnown RBP13.81□□□□□ -0.2
MCF2L-209ENST00000397036 CINPQ9BW66 212 aaPredicted RBP13.81□□□□□ -0.2
MCF2L-209ENST00000397036 POMKQ9H5K3 350 aa13.81□□□□□ -0.2
MCF2L-209ENST00000397036 NINJ2Q9NZG7 142 aa13.81□□□□□ -0.2
MCF2L-209ENST00000397036 CDH22Q9UJ99 828 aa13.81□□□□□ -0.2
MCF2L-209ENST00000397036 GGA2Q9UJY4 613 aa13.81□□□□□ -0.2
MCF2L-209ENST00000397036 HS3ST2Q9Y278 367 aa13.81□□□□□ -0.2
MCF2L-209ENST00000397036 NYNRINQ9P2P1 1898 aaKnown RBP13.81□□□□□ -0.2
MCF2L-209ENST00000397036 SOX1O00570 391 aaPredicted RBP13.8□□□□□ -0.2
MCF2L-209ENST00000397036 TCEA3O75764 348 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 MMP2P08253 660 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 PSMC3P17980 439 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 GLDCP23378 1020 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 SKOR1P84550 965 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 CDH17Q12864 832 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 SLC29A2Q14542 456 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 KYNUQ16719 465 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 BBS9Q3SYG4 887 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 DENND2CQ68D51 928 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 PLPP6Q8IY26 295 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 ZBED8Q8IZ13 594 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 ATP11CQ8NB49 1132 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 SPATA22Q8NHS9 363 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 BHMTQ93088 406 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 NUDCD1Q96RS6 583 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 EBNA1BP2Q99848 306 aaKnown RBP13.8□□□□□ -0.2
MCF2L-209ENST00000397036 ROPN1BQ9BZX4 212 aaPredicted RBP13.8□□□□□ -0.2
MCF2L-209ENST00000397036 ECT2Q9H8V3 914 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 ROPN1Q9HAT0 212 aaPredicted RBP13.8□□□□□ -0.2
MCF2L-209ENST00000397036 LRRC4CQ9HCJ2 640 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 FAM53CQ9NYF3 392 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 BFARQ9NZS9 450 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 ARIH1Q9Y4X5 557 aaPredicted RBP13.8□□□□□ -0.2
MCF2L-209ENST00000397036 LOC285095A0A1B0GVY8 99 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 ANHXE9PGG2 379 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 MUSKO15146 869 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 TMCC1O94876 653 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 SERPINF2P08697 491 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 GBP2P32456 591 aaPredicted RBP13.8□□□□□ -0.2
MCF2L-209ENST00000397036 GRIA1P42261 906 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 MAPK8P45983 427 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 SERPINH1P50454 418 aaKnown RBP13.8□□□□□ -0.2
MCF2L-209ENST00000397036 WNT3AP56704 352 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 FAM182AQ5T1J6 154 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 ASTLQ6HA08 431 aaPredicted RBP13.8□□□□□ -0.2
MCF2L-209ENST00000397036 DENND5AQ6IQ26 1287 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 AHI1Q8N157 1196 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 ASIC4Q96FT7 647 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 MRGPRX2Q96LB1 330 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 ZIM3Q96PE6 472 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 SEMA3CQ99985 751 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 TBL1YQ9BQ87 522 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 WDR83Q9BRX9 315 aaKnown RBP13.8□□□□□ -0.2
MCF2L-209ENST00000397036 CEP44Q9C0F1 390 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms