RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 AHCYL2Q96HN2 611 aaKnown RBP15.82■□□□□ 0.12
GNE-202ENST00000396594 FHDC1Q9C0D6 1143 aaPredicted RBP15.82■□□□□ 0.12
GNE-202ENST00000396594 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.82■□□□□ 0.12
GNE-202ENST00000396594 VAPBO95292 243 aa15.82■□□□□ 0.12
GNE-202ENST00000396594 DDX6P26196 483 aaKnown RBP eCLIP15.82■□□□□ 0.12
GNE-202ENST00000396594 TMEM154Q6P9G4 183 aa15.82■□□□□ 0.12
GNE-202ENST00000396594 IYDQ6PHW0 289 aa15.82■□□□□ 0.12
GNE-202ENST00000396594 SRFBP1Q8NEF9 429 aaKnown RBP15.82■□□□□ 0.12
GNE-202ENST00000396594 OMDQ99983 421 aa15.82■□□□□ 0.12
GNE-202ENST00000396594 ACBD6Q9BR61 282 aa15.82■□□□□ 0.12
GNE-202ENST00000396594 HGH1Q9BTY7 390 aa15.82■□□□□ 0.12
GNE-202ENST00000396594 NFICP08651 508 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 SPATA31C1P0DKV0 1188 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 CTNNB1P35222 781 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 FMO1Q01740 532 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 RFTN1Q14699 578 aaPredicted RBP15.81■□□□□ 0.12
GNE-202ENST00000396594 C10orf53Q8N6V4 93 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 FNDC5Q8NAU1 212 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 AVL9Q8NBF6 648 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 EBNA1BP2Q99848 306 aaKnown RBP15.81■□□□□ 0.12
GNE-202ENST00000396594 ACSS3Q9H6R3 686 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 FANCEQ9HB96 536 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 KDM4FA0A1W2PPD8 638 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 ZNF24P17028 368 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 WARSP23381 471 aaKnown RBP15.81■□□□□ 0.12
GNE-202ENST00000396594 ATXN3P54252 364 aaPredicted RBP15.81■□□□□ 0.12
GNE-202ENST00000396594 ATN1P54259 1190 aaPredicted RBP15.81■□□□□ 0.12
GNE-202ENST00000396594 ORC1Q13415 861 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 SPIDRQ14159 915 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 EARS2Q5JPH6 523 aaKnown RBP15.81■□□□□ 0.12
GNE-202ENST00000396594 MRPS33Q9Y291 106 aaKnown RBP15.81■□□□□ 0.12
GNE-202ENST00000396594 LCA5LO95447 670 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 PRKAR2AP13861 404 aaKnown RBP15.81■□□□□ 0.12
GNE-202ENST00000396594 RBL1P28749 1068 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 BTKQ06187 659 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 PTF1AQ7RTS3 328 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 FAM126BQ8IXS8 530 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 SLC4A11Q8NBS3 891 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 TCP10LQ8TDR4 215 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 FBXL21Q9UKT6 434 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 RAP2CQ9Y3L5 183 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 A0A0G2JLL6 359 aaPredicted RBP15.81■□□□□ 0.12
GNE-202ENST00000396594 BTN3A1O00481 513 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 RAB10P61026 200 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 ZNF844Q08AG5 666 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 SH3D19Q5HYK7 790 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 ZBTB49Q6ZSB9 765 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 PRRT2Q7Z6L0 340 aaPredicted RBP15.81■□□□□ 0.12
GNE-202ENST00000396594 PPP1R36Q96LQ0 422 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 OSGEPL1Q9H4B0 414 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 PCDHGB3Q9Y5G1 929 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 IGKV6D-41A0A0C4DH26 115 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 SEC22BO75396 215 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 ASLP04424 464 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 RCN1Q15293 331 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 ARMCX4Q5H9R4 360 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 TBCELQ5QJ74 424 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 PLEKHA7Q6IQ23 1121 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 SLC30A9Q6PML9 568 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 AGMOQ6ZNB7 445 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 CLYBLQ8N0X4 340 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 GJD3Q8N144 294 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 RASGEF1CQ8N431 466 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 BAP1Q92560 729 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 SLC4A9Q96Q91 983 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 ARL15Q9NXU5 204 aa15.81■□□□□ 0.12
GNE-202ENST00000396594 PRPF19Q9UMS4 504 aaKnown RBP15.81■□□□□ 0.12
GNE-202ENST00000396594 LOC100653049A0A140TA62 436 aa15.8■□□□□ 0.12
GNE-202ENST00000396594 KRT34O76011 436 aa15.8■□□□□ 0.12
GNE-202ENST00000396594 CPSF4O95639 269 aaKnown RBP15.8■□□□□ 0.12
GNE-202ENST00000396594 CTSEP14091 401 aa15.8■□□□□ 0.12
GNE-202ENST00000396594 ADSLP30566 484 aaPredicted RBP15.8■□□□□ 0.12
GNE-202ENST00000396594 SPATA19Q7Z5L4 167 aa15.8■□□□□ 0.12
GNE-202ENST00000396594 MPP5Q8N3R9 675 aa15.8■□□□□ 0.12
GNE-202ENST00000396594 CKAP2Q8WWK9 683 aa15.8■□□□□ 0.12
GNE-202ENST00000396594 POMKQ9H5K3 350 aa15.8■□□□□ 0.12
GNE-202ENST00000396594 EIF2B3Q9NR50 452 aaKnown RBP15.8■□□□□ 0.12
GNE-202ENST00000396594 FETUBQ9UGM5 382 aa15.8■□□□□ 0.12
GNE-202ENST00000396594 MRPS17Q9Y2R5 130 aaKnown RBP15.8■□□□□ 0.12
GNE-202ENST00000396594 TFE3P19532 575 aaPredicted RBP15.8■□□□□ 0.12
GNE-202ENST00000396594 NDST2P52849 883 aa15.8■□□□□ 0.12
GNE-202ENST00000396594 SYT12Q8IV01 421 aa15.8■□□□□ 0.12
GNE-202ENST00000396594 YIPF3Q9GZM5 350 aa15.8■□□□□ 0.12
GNE-202ENST00000396594 EPB41L4BQ9H329 900 aa15.8■□□□□ 0.12
GNE-202ENST00000396594 BCLAF3A2AJT9 711 aaKnown RBP15.8■□□□□ 0.12
GNE-202ENST00000396594 CACNB4O00305 520 aaPredicted RBP15.8■□□□□ 0.12
GNE-202ENST00000396594 ZBTB22O15209 634 aa15.8■□□□□ 0.12
GNE-202ENST00000396594 SEC24DO94855 1032 aaPredicted RBP15.8■□□□□ 0.12
GNE-202ENST00000396594 GABRB2P47870 512 aa15.8■□□□□ 0.12
GNE-202ENST00000396594 ALDH6A1Q02252 535 aaKnown RBP15.8■□□□□ 0.12
GNE-202ENST00000396594 CDK18Q07002 472 aa15.8■□□□□ 0.12
GNE-202ENST00000396594 FUT2Q10981 343 aa15.8■□□□□ 0.12
GNE-202ENST00000396594 IRF5Q13568 498 aa15.8■□□□□ 0.12
GNE-202ENST00000396594 SLC26A9Q7LBE3 791 aa15.8■□□□□ 0.12
GNE-202ENST00000396594 DNAJB8Q8NHS0 232 aa15.8■□□□□ 0.12
GNE-202ENST00000396594 ZNF75CPQ92670 426 aaPredicted RBP15.8■□□□□ 0.12
GNE-202ENST00000396594 CELF6Q96J87 481 aaKnown RBP15.8■□□□□ 0.12
GNE-202ENST00000396594 SEMA4AQ9H3S1 761 aa15.8■□□□□ 0.12
GNE-202ENST00000396594 EXOSC4Q9NPD3 245 aaKnown RBP15.8■□□□□ 0.12
GNE-202ENST00000396594 USE1Q9NZ43 259 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms