RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 NUMBLQ9Y6R0 609 aa13.91□□□□□ -0.18
VAPB-202ENST00000395802 SHROOM3Q8TF72 1996 aa13.91□□□□□ -0.18
VAPB-202ENST00000395802 NYNRINQ9P2P1 1898 aaKnown RBP13.91□□□□□ -0.18
VAPB-202ENST00000395802 DOCK8Q8NF50 2099 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 SPTBN5Q9NRC6 3674 aaKnown RBP13.9□□□□□ -0.18
VAPB-202ENST00000395802 ASLP04424 464 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 SERPINF2P08697 491 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 CA4P22748 312 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 CD68P34810 354 aaPredicted RBP13.9□□□□□ -0.18
VAPB-202ENST00000395802 SERPINH1P50454 418 aaKnown RBP13.9□□□□□ -0.18
VAPB-202ENST00000395802 DHX9Q08211 1270 aaKnown RBP13.9□□□□□ -0.18
VAPB-202ENST00000395802 EIF4HQ15056 248 aaKnown RBP13.9□□□□□ -0.18
VAPB-202ENST00000395802 SLC14A2Q15849 920 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 ITPRIPL2Q3MIP1 535 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 DNAJC21Q5F1R6 531 aaKnown RBP13.9□□□□□ -0.18
VAPB-202ENST00000395802 HABP4Q5JVS0 413 aaKnown RBP13.9□□□□□ -0.18
VAPB-202ENST00000395802 ALG1LQ6GMV1 187 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 Q7L0L9 218 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 TMC3Q7Z5M5 1100 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 KIAA0907Q7Z7F0 614 aaPredicted RBP13.9□□□□□ -0.18
VAPB-202ENST00000395802 RELL1Q8IUW5 271 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 APCDD1Q8J025 514 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 TAB3Q8N5C8 712 aaPredicted RBP13.9□□□□□ -0.18
VAPB-202ENST00000395802 PDCD7Q8N8D1 485 aaKnown RBP13.9□□□□□ -0.18
VAPB-202ENST00000395802 CSGALNACT1Q8TDX6 532 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 ZFYVE19Q96K21 471 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 LMLNQ96KR4 655 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 RBM15Q96T37 977 aaKnown RBP eCLIP13.9□□□□□ -0.18
VAPB-202ENST00000395802 MGME1Q9BQP7 344 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 FSD1LQ9BXM9 530 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 BRD9Q9H8M2 597 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 CLEC4EQ9ULY5 219 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 XIRP2A4UGR9 3374 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 REV3LO60673 3130 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 SUN1O94901 812 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 ARSAP15289 507 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 ECT2LQ008S8 904 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 HTR4Q13639 388 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 GRM2Q14416 872 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 LEXMQ3ZCV2 418 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 FAXCQ5TGI0 409 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 GRAMD4Q6IC98 578 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 CCDC25Q86WR0 208 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 SUGP1Q8IWZ8 645 aaKnown RBP13.9□□□□□ -0.18
VAPB-202ENST00000395802 ETFBKMTQ8IXQ9 262 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 NAT16Q8N8M0 369 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 ATP11CQ8NB49 1132 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 PPM1EQ8WY54 764 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 LRRC39Q96DD0 335 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 ASIC4Q96FT7 647 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 IMP4Q96G21 291 aaKnown RBP13.9□□□□□ -0.18
VAPB-202ENST00000395802 TTC25Q96NG3 672 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 GUCD1Q96NT3 240 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 TXLNGYQ9BZA5 131 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 CEP44Q9C0F1 390 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 BRWD1Q9NSI6 2320 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 OGFRQ9NZT2 677 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 HS3ST2Q9Y278 367 aa13.9□□□□□ -0.18
VAPB-202ENST00000395802 GRXCR2A6NFK2 248 aa13.89□□□□□ -0.19
VAPB-202ENST00000395802 SNAP91O60641 907 aa13.89□□□□□ -0.19
VAPB-202ENST00000395802 TULP3O75386 442 aa13.89□□□□□ -0.19
VAPB-202ENST00000395802 TMCC1O94876 653 aa13.89□□□□□ -0.19
VAPB-202ENST00000395802 SRPRAP08240 638 aaKnown RBP13.89□□□□□ -0.19
VAPB-202ENST00000395802 GLDCP23378 1020 aa13.89□□□□□ -0.19
VAPB-202ENST00000395802 VASPP50552 380 aaPredicted RBP13.89□□□□□ -0.19
VAPB-202ENST00000395802 RHOAP61586 193 aa13.89□□□□□ -0.19
VAPB-202ENST00000395802 CBLBQ13191 982 aa13.89□□□□□ -0.19
VAPB-202ENST00000395802 SMAD2Q15796 467 aaKnown RBP13.89□□□□□ -0.19
VAPB-202ENST00000395802 LRRC8BQ6P9F7 803 aa13.89□□□□□ -0.19
VAPB-202ENST00000395802 TRMT10CQ7L0Y3 403 aaKnown RBP13.89□□□□□ -0.19
VAPB-202ENST00000395802 KLHDC8BQ8IXV7 354 aa13.89□□□□□ -0.19
VAPB-202ENST00000395802 UCMAQ8WVF2 138 aa13.89□□□□□ -0.19
VAPB-202ENST00000395802 TTC17Q96AE7 1141 aa13.89□□□□□ -0.19
VAPB-202ENST00000395802 ISG20Q96AZ6 181 aaKnown RBP13.89□□□□□ -0.19
VAPB-202ENST00000395802 PKNOX2Q96KN3 472 aa13.89□□□□□ -0.19
VAPB-202ENST00000395802 SERPINB12Q96P63 405 aa13.89□□□□□ -0.19
VAPB-202ENST00000395802 TRPV5Q9NQA5 729 aa13.89□□□□□ -0.19
VAPB-202ENST00000395802 HPS4Q9NQG7 708 aa13.89□□□□□ -0.19
VAPB-202ENST00000395802 PLA2G4CQ9UP65 541 aa13.89□□□□□ -0.19
VAPB-202ENST00000395802 ARIH1Q9Y4X5 557 aaPredicted RBP13.89□□□□□ -0.19
VAPB-202ENST00000395802 MYO18AQ92614 2054 aaKnown RBP13.88□□□□□ -0.19
VAPB-202ENST00000395802 GOLGA8MH3BSY2 632 aa13.88□□□□□ -0.19
VAPB-202ENST00000395802 TMEM63AO94886 807 aa13.88□□□□□ -0.19
VAPB-202ENST00000395802 EPOP01588 193 aa13.88□□□□□ -0.19
VAPB-202ENST00000395802 ST8SIA6P61647 398 aa13.88□□□□□ -0.19
VAPB-202ENST00000395802 FUT11Q495W5 492 aa13.88□□□□□ -0.19
VAPB-202ENST00000395802 ANKRD22Q5VYY1 191 aa13.88□□□□□ -0.19
VAPB-202ENST00000395802 ARMC3Q5W041 872 aa13.88□□□□□ -0.19
VAPB-202ENST00000395802 MBLAC2Q68D91 279 aa13.88□□□□□ -0.19
VAPB-202ENST00000395802 KCTD11Q693B1 232 aa13.88□□□□□ -0.19
VAPB-202ENST00000395802 CCNJLQ8IV13 435 aa13.88□□□□□ -0.19
VAPB-202ENST00000395802 KRT222Q8N1A0 295 aa13.88□□□□□ -0.19
VAPB-202ENST00000395802 DNAAF3Q8N9W5 541 aa13.88□□□□□ -0.19
VAPB-202ENST00000395802 NUDCD1Q96RS6 583 aa13.88□□□□□ -0.19
VAPB-202ENST00000395802 SEMA3CQ99985 751 aa13.88□□□□□ -0.19
VAPB-202ENST00000395802 NAT9Q9BTE0 207 aa13.88□□□□□ -0.19
VAPB-202ENST00000395802 PLA2G2FQ9BZM2 168 aa13.88□□□□□ -0.19
VAPB-202ENST00000395802 ACBD3Q9H3P7 528 aa13.88□□□□□ -0.19
VAPB-202ENST00000395802 SCUBE2Q9NQ36 999 aa13.88□□□□□ -0.19
VAPB-202ENST00000395802 INTS6Q9UL03 887 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms