RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 ARSIQ5FYB1 569 aa20.25■□□□□ 0.83
SNCA-203ENST00000394986 PMS2CLQ68D20 193 aa20.25■□□□□ 0.83
SNCA-203ENST00000394986 SLC9A4Q6AI14 798 aa20.25■□□□□ 0.83
SNCA-203ENST00000394986 NPNTQ6UXI9 565 aa20.25■□□□□ 0.83
SNCA-203ENST00000394986 DSG4Q86SJ6 1040 aa20.25■□□□□ 0.83
SNCA-203ENST00000394986 NT5DC3Q86UY8 548 aa20.25■□□□□ 0.83
SNCA-203ENST00000394986 OR2AP1Q8NGE2 309 aa20.25■□□□□ 0.83
SNCA-203ENST00000394986 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.25■□□□□ 0.83
SNCA-203ENST00000394986 ZC3H10Q96K80 434 aaKnown RBP20.25■□□□□ 0.83
SNCA-203ENST00000394986 TSGA10Q9BZW7 698 aa20.25■□□□□ 0.83
SNCA-203ENST00000394986 ZDHHC6Q9H6R6 413 aa20.25■□□□□ 0.83
SNCA-203ENST00000394986 WSB2Q9NYS7 404 aaPredicted RBP20.25■□□□□ 0.83
SNCA-203ENST00000394986 IL36AQ9UHA7 158 aa20.25■□□□□ 0.83
SNCA-203ENST00000394986 FARP1Q9Y4F1 1045 aaPredicted RBP20.25■□□□□ 0.83
SNCA-203ENST00000394986 ZNF487B1APH4 448 aa20.24■□□□□ 0.83
SNCA-203ENST00000394986 KPNA3O00505 521 aaPredicted RBP20.24■□□□□ 0.83
SNCA-203ENST00000394986 APOL1O14791 398 aa20.24■□□□□ 0.83
SNCA-203ENST00000394986 KRT86O43790 486 aa20.24■□□□□ 0.83
SNCA-203ENST00000394986 LEFTY1O75610 366 aa20.24■□□□□ 0.83
SNCA-203ENST00000394986 GSRP00390 522 aa20.24■□□□□ 0.83
SNCA-203ENST00000394986 CTNNA2P26232 953 aa20.24■□□□□ 0.83
SNCA-203ENST00000394986 ACSL1P33121 698 aa20.24■□□□□ 0.83
SNCA-203ENST00000394986 DRD3P35462 400 aa20.24■□□□□ 0.83
SNCA-203ENST00000394986 RGRP47804 291 aa20.24■□□□□ 0.83
SNCA-203ENST00000394986 GALNT2Q10471 571 aa20.24■□□□□ 0.83
SNCA-203ENST00000394986 ELF2Q15723 593 aa20.24■□□□□ 0.83
SNCA-203ENST00000394986 KAZNQ674X7 775 aa20.24■□□□□ 0.83
SNCA-203ENST00000394986 VSIG1Q86XK7 387 aa20.24■□□□□ 0.83
SNCA-203ENST00000394986 CCDC50Q8IVM0 306 aa20.24■□□□□ 0.83
SNCA-203ENST00000394986 HDDC3Q8N4P3 179 aa20.24■□□□□ 0.83
SNCA-203ENST00000394986 CASKIN2Q8WXE0 1202 aa20.24■□□□□ 0.83
SNCA-203ENST00000394986 VOPP1Q96AW1 172 aa20.24■□□□□ 0.83
SNCA-203ENST00000394986 HEPHQ9BQS7 1158 aa20.24■□□□□ 0.83
SNCA-203ENST00000394986 GPR174Q9BXC1 333 aa20.24■□□□□ 0.83
SNCA-203ENST00000394986 MAK16Q9BXY0 300 aaKnown RBP20.24■□□□□ 0.83
SNCA-203ENST00000394986 DTLQ9NZJ0 730 aa20.24■□□□□ 0.83
SNCA-203ENST00000394986 PPP2R2CQ9Y2T4 447 aa20.24■□□□□ 0.83
SNCA-203ENST00000394986 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.24■□□□□ 0.83
SNCA-203ENST00000394986 PCDHA3Q9Y5H8 950 aa20.24■□□□□ 0.83
SNCA-203ENST00000394986 C1QTNF3-AMACRE9PGA6 284 aa20.23■□□□□ 0.83
SNCA-203ENST00000394986 KRIT1O00522 736 aa20.23■□□□□ 0.83
SNCA-203ENST00000394986 ZRANB2O95218 330 aaKnown RBP eCLIP20.23■□□□□ 0.83
SNCA-203ENST00000394986 PEX11BO96011 259 aa20.23■□□□□ 0.83
SNCA-203ENST00000394986 C5AR1P21730 350 aa20.23■□□□□ 0.83
SNCA-203ENST00000394986 PTGER3P43115 390 aa20.23■□□□□ 0.83
SNCA-203ENST00000394986 DHPSP49366 369 aaPredicted RBP20.23■□□□□ 0.83
SNCA-203ENST00000394986 SNRPD1P62314 119 aaKnown RBP20.23■□□□□ 0.83
SNCA-203ENST00000394986 ADCY2Q08462 1091 aa20.23■□□□□ 0.83
SNCA-203ENST00000394986 SLC10A7Q0GE19 358 aa20.23■□□□□ 0.83
SNCA-203ENST00000394986 TAZQ16635 292 aa20.23■□□□□ 0.83
SNCA-203ENST00000394986 LAIR1Q6GTX8 287 aa20.23■□□□□ 0.83
SNCA-203ENST00000394986 PEX26Q7Z412 305 aa20.23■□□□□ 0.83
SNCA-203ENST00000394986 C11orf74Q86VG3 221 aa20.23■□□□□ 0.83
SNCA-203ENST00000394986 TSEN2Q8NCE0 465 aaKnown RBP20.23■□□□□ 0.83
SNCA-203ENST00000394986 ALG3Q92685 438 aa20.23■□□□□ 0.83
SNCA-203ENST00000394986 ARRDC3Q96B67 414 aa20.23■□□□□ 0.83
SNCA-203ENST00000394986 GDAP1L1Q96MZ0 367 aa20.23■□□□□ 0.83
SNCA-203ENST00000394986 OMDQ99983 421 aa20.23■□□□□ 0.83
SNCA-203ENST00000394986 NEUROG2Q9H2A3 272 aa20.23■□□□□ 0.83
SNCA-203ENST00000394986 EVLQ9UI08 416 aaPredicted RBP20.23■□□□□ 0.83
SNCA-203ENST00000394986 AMFRQ9UKV5 643 aa20.23■□□□□ 0.83
SNCA-203ENST00000394986 HEY1Q9Y5J3 304 aa20.23■□□□□ 0.83
SNCA-203ENST00000394986 hCG_1818297A0A087WSY0 165 aa20.22■□□□□ 0.83
SNCA-203ENST00000394986 MUSKO15146 869 aa20.22■□□□□ 0.83
SNCA-203ENST00000394986 INSIG1O15503 277 aa20.22■□□□□ 0.83
SNCA-203ENST00000394986 NDUFS2O75306 463 aa20.22■□□□□ 0.83
SNCA-203ENST00000394986 GJB3O75712 270 aa20.22■□□□□ 0.83
SNCA-203ENST00000394986 RHOBTB1O94844 696 aa20.22■□□□□ 0.83
SNCA-203ENST00000394986 IGSF6O95976 241 aa20.22■□□□□ 0.83
SNCA-203ENST00000394986 PRNPP04156 253 aa20.22■□□□□ 0.83
SNCA-203ENST00000394986 OXTRP30559 389 aa20.22■□□□□ 0.83
SNCA-203ENST00000394986 GARSP41250 739 aaKnown RBP20.22■□□□□ 0.83
SNCA-203ENST00000394986 PEX5P50542 639 aa20.22■□□□□ 0.83
SNCA-203ENST00000394986 CNTN1Q12860 1018 aa20.22■□□□□ 0.83
SNCA-203ENST00000394986 TMCO4Q5TGY1 634 aa20.22■□□□□ 0.83
SNCA-203ENST00000394986 FAM46CQ5VWP2 391 aa20.22■□□□□ 0.83
SNCA-203ENST00000394986 AADACL2Q6P093 401 aa20.22■□□□□ 0.83
SNCA-203ENST00000394986 SLC36A4Q6YBV0 504 aa20.22■□□□□ 0.83
SNCA-203ENST00000394986 USP30Q70CQ3 517 aa20.22■□□□□ 0.83
SNCA-203ENST00000394986 LPCAT2Q7L5N7 544 aa20.22■□□□□ 0.83
SNCA-203ENST00000394986 SLC41A1Q8IVJ1 513 aa20.22■□□□□ 0.83
SNCA-203ENST00000394986 RCOR2Q8IZ40 523 aa20.22■□□□□ 0.83
SNCA-203ENST00000394986 SYCE1Q8N0S2 351 aa20.22■□□□□ 0.83
SNCA-203ENST00000394986 RNF10Q8N5U6 811 aaKnown RBP20.22■□□□□ 0.83
SNCA-203ENST00000394986 TMIEQ8NEW7 156 aa20.22■□□□□ 0.83
SNCA-203ENST00000394986 EXD1Q8NHP7 514 aa20.22■□□□□ 0.83
SNCA-203ENST00000394986 RBM41Q96IZ5 413 aaKnown RBP20.22■□□□□ 0.83
SNCA-203ENST00000394986 HERPUD2Q9BSE4 406 aa20.22■□□□□ 0.83
SNCA-203ENST00000394986 CINPQ9BW66 212 aaPredicted RBP20.22■□□□□ 0.83
SNCA-203ENST00000394986 BTBD1Q9H0C5 482 aa20.22■□□□□ 0.83
SNCA-203ENST00000394986 SCML1Q9UN30 329 aa20.22■□□□□ 0.83
SNCA-203ENST00000394986 NCKAP1Q9Y2A7 1128 aa20.22■□□□□ 0.83
SNCA-203ENST00000394986 NUP205Q92621 2012 aa20.21■□□□□ 0.83
SNCA-203ENST00000394986 CCDC66A2RUB6 948 aa20.21■□□□□ 0.83
SNCA-203ENST00000394986 GFRA3O60609 400 aa20.21■□□□□ 0.83
SNCA-203ENST00000394986 LBRQ14739 615 aaKnown RBP20.21■□□□□ 0.83
SNCA-203ENST00000394986 CCDC6Q16204 474 aa20.21■□□□□ 0.83
SNCA-203ENST00000394986 MYLK3Q32MK0 819 aa20.21■□□□□ 0.83
SNCA-203ENST00000394986 FAM182AQ5T1J6 154 aa20.21■□□□□ 0.83
SNCA-203ENST00000394986 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms