RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 SEL1L3Q68CR1 1132 aa9.03□□□□□ -0.96
ATG4A-205ENST00000394892 NAPEPLDQ6IQ20 393 aa9.03□□□□□ -0.96
ATG4A-205ENST00000394892 PLEKHA7Q6IQ23 1121 aa9.03□□□□□ -0.96
ATG4A-205ENST00000394892 RWDD4Q6NW29 188 aaKnown RBP9.03□□□□□ -0.96
ATG4A-205ENST00000394892 ZNF783Q6ZMS7 281 aa9.03□□□□□ -0.96
ATG4A-205ENST00000394892 MSANTD4Q8NCY6 345 aa9.03□□□□□ -0.96
ATG4A-205ENST00000394892 OR6K2Q8NGY2 324 aa9.03□□□□□ -0.96
ATG4A-205ENST00000394892 RHBDD1Q8TEB9 315 aa9.03□□□□□ -0.96
ATG4A-205ENST00000394892 NSMCE3Q96MG7 304 aa9.03□□□□□ -0.96
ATG4A-205ENST00000394892 ELF4Q99607 663 aaPredicted RBP9.03□□□□□ -0.96
ATG4A-205ENST00000394892 MYOCQ99972 504 aa9.03□□□□□ -0.96
ATG4A-205ENST00000394892 KDM4CQ9H3R0 1056 aa9.03□□□□□ -0.96
ATG4A-205ENST00000394892 CBX8Q9HC52 389 aa9.03□□□□□ -0.96
ATG4A-205ENST00000394892 FZD3Q9NPG1 666 aa9.03□□□□□ -0.96
ATG4A-205ENST00000394892 SCUBE2Q9NQ36 999 aa9.03□□□□□ -0.96
ATG4A-205ENST00000394892 AASDHPPTQ9NRN7 309 aa9.03□□□□□ -0.96
ATG4A-205ENST00000394892 AIPL1Q9NZN9 384 aa9.03□□□□□ -0.96
ATG4A-205ENST00000394892 GGT7Q9UJ14 662 aa9.03□□□□□ -0.96
ATG4A-205ENST00000394892 FZD10Q9ULW2 581 aa9.03□□□□□ -0.96
ATG4A-205ENST00000394892 CELSR3Q9NYQ7 3312 aa9.03□□□□□ -0.96
ATG4A-205ENST00000394892 PKD1L2Q7Z442 2459 aa9.03□□□□□ -0.96
ATG4A-205ENST00000394892 DMXL2Q8TDJ6 3036 aa9.02□□□□□ -0.96
ATG4A-205ENST00000394892 CEP192Q8TEP8 1941 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 A0A1W2PQU0 124 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 TMEM191CA6NGB0 347 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 TMCO5BA8MYB1 307 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 GOLGA6L22H0YM25 854 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 KPNA3O00505 521 aaPredicted RBP9.02□□□□□ -0.97
ATG4A-205ENST00000394892 SLC31A1O15431 190 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 INSIG1O15503 277 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 FLRT2O43155 660 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 TPM2P07951 284 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 GIMD1P0DJR0 217 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 SKILP12757 684 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 TCF4P15884 667 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 FERP16591 822 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 ITIH2P19823 946 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 EPHA8P29322 1005 aaPredicted RBP9.02□□□□□ -0.97
ATG4A-205ENST00000394892 L1CAMP32004 1257 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 PRKCIP41743 596 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 MAPKAPK2P49137 400 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 ZNF165P49910 485 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 CCT8P50990 548 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 CCNHP51946 323 aaPredicted RBP9.02□□□□□ -0.97
ATG4A-205ENST00000394892 CLDN2P57739 230 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 SOWAHCQ53LP3 525 aaPredicted RBP9.02□□□□□ -0.97
ATG4A-205ENST00000394892 CARD16Q5EG05 197 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 ATXN7L2Q5T6C5 722 aaPredicted RBP9.02□□□□□ -0.97
ATG4A-205ENST00000394892 ACBD5Q5T8D3 534 aaPredicted RBP9.02□□□□□ -0.97
ATG4A-205ENST00000394892 SFMBT2Q5VUG0 894 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 FAM46CQ5VWP2 391 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 DNAJC24Q6P3W2 148 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 GCNT7Q6ZNI0 430 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 ERN2Q76MJ5 926 aaKnown RBP9.02□□□□□ -0.97
ATG4A-205ENST00000394892 PARS2Q7L3T8 475 aaKnown RBP9.02□□□□□ -0.97
ATG4A-205ENST00000394892 SLFN11Q7Z7L1 901 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 DSG4Q86SJ6 1040 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 LUZP1Q86V48 1076 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 TP53INP2Q8IXH6 220 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 PCDH20Q8N6Y1 951 aaKnown RBP9.02□□□□□ -0.97
ATG4A-205ENST00000394892 RTL3Q8N8U3 475 aaKnown RBP9.02□□□□□ -0.97
ATG4A-205ENST00000394892 MFSD2AQ8NA29 543 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 TBC1D31Q96DN5 1066 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 HMCESQ96FZ2 354 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 LRIG1Q96JA1 1093 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 BMFQ96LC9 184 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 PPP1R9BQ96SB3 815 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 KLF6Q99612 283 aaPredicted RBP9.02□□□□□ -0.97
ATG4A-205ENST00000394892 HEPHQ9BQS7 1158 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 CNPY3Q9BT09 278 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 SELENOOQ9BVL4 669 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 HDAC8Q9BY41 377 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 TM6SF2Q9BZW4 377 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 CEP44Q9C0F1 390 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 HAUS4Q9H6D7 363 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 SEPT11Q9NVA2 429 aaKnown RBP9.02□□□□□ -0.97
ATG4A-205ENST00000394892 IL36AQ9UHA7 158 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 MYO6Q9UM54 1294 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 ITM2BQ9Y287 266 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 SSUH2Q9Y2M2 353 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 RAXQ9Y2V3 346 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 PAXBP1Q9Y5B6 917 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 FADS3Q9Y5Q0 445 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 ZFYVE26Q68DK2 2539 aa9.02□□□□□ -0.97
ATG4A-205ENST00000394892 CABIN1Q9Y6J0 2220 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 A0A1W2PQC6 194 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 SYCE3A1L190 88 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 WASH4PA8MWX3 477 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 C1QTNF3-AMACRE9PGA6 284 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 TRIM38O00635 465 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 KDELR3O43731 214 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 PRNPP04156 253 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 IL1R2P27930 398 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 RXRGP48443 463 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 DNA2P51530 1060 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 C21orf59P57076 290 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 SLC20A2Q08357 652 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 SFSWAPQ12872 951 aaKnown RBP9.01□□□□□ -0.97
ATG4A-205ENST00000394892 DNAJC3Q13217 504 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 CAMK2BQ13554 666 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms