RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 PCSK1P29120 753 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 CCR1P32246 355 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 RAB27AP51159 221 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 DHFR2Q86XF0 187 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 PDSS2Q86YH6 399 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 OR52K2Q8NGK3 314 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 DUSP16Q9BY84 665 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 FBXO5Q9UKT4 447 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 AHDC1Q5TGY3 1603 aaPredicted RBP16.35■□□□□ 0.21
PCDH1-203ENST00000394536 PSMD3O43242 534 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 RTN3O95197 1032 aaPredicted RBP16.35■□□□□ 0.21
PCDH1-203ENST00000394536 PIRTP0C851 137 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 LRPAP1P30533 357 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 GEMP55040 296 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 RAB10P61026 200 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 CCNIQ14094 377 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 TSPAN14Q8NG11 270 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 MAPK15Q8TD08 544 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 EZH1Q92800 747 aaPredicted RBP16.35■□□□□ 0.21
PCDH1-203ENST00000394536 RMND5BQ96G75 393 aaPredicted RBP16.35■□□□□ 0.21
PCDH1-203ENST00000394536 VPS50Q96JG6 964 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 ZNF778Q96MU6 729 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 TBL1YQ9BQ87 522 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 ABI2Q9NYB9 513 aaPredicted RBP16.35■□□□□ 0.21
PCDH1-203ENST00000394536 ADAM28Q9UKQ2 775 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 ANGPTL3Q9Y5C1 460 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 SPTLC1O15269 473 aa16.34■□□□□ 0.21
PCDH1-203ENST00000394536 TIPRLO75663 272 aa16.34■□□□□ 0.21
PCDH1-203ENST00000394536 CRABP2P29373 138 aa16.34■□□□□ 0.21
PCDH1-203ENST00000394536 HSPA13P48723 471 aa16.34■□□□□ 0.21
PCDH1-203ENST00000394536 GHRHRQ02643 423 aa16.34■□□□□ 0.21
PCDH1-203ENST00000394536 SNAPC2Q13487 334 aa16.34■□□□□ 0.21
PCDH1-203ENST00000394536 LRRC52Q8N7C0 313 aa16.34■□□□□ 0.21
PCDH1-203ENST00000394536 PHC3Q8NDX5 983 aa16.34■□□□□ 0.21
PCDH1-203ENST00000394536 GATA6Q92908 595 aa16.34■□□□□ 0.21
PCDH1-203ENST00000394536 RHOJQ9H4E5 214 aa16.34■□□□□ 0.21
PCDH1-203ENST00000394536 ZDHHC2Q9UIJ5 367 aa16.34■□□□□ 0.21
PCDH1-203ENST00000394536 SNX2O60749 519 aa16.34■□□□□ 0.21
PCDH1-203ENST00000394536 C16orf72Q14CZ0 275 aa16.34■□□□□ 0.21
PCDH1-203ENST00000394536 SPATA2LQ8IUW3 424 aaPredicted RBP16.34■□□□□ 0.21
PCDH1-203ENST00000394536 THEM5Q8N1Q8 247 aa16.34■□□□□ 0.21
PCDH1-203ENST00000394536 PNPLA1Q8N8W4 532 aa16.34■□□□□ 0.21
PCDH1-203ENST00000394536 SHCBP1Q8NEM2 672 aa16.34■□□□□ 0.21
PCDH1-203ENST00000394536 TSPAN17Q96FV3 270 aa16.34■□□□□ 0.21
PCDH1-203ENST00000394536 C1orf21Q9H246 121 aa16.34■□□□□ 0.21
PCDH1-203ENST00000394536 CATSPERBQ9H7T0 1116 aa16.34■□□□□ 0.21
PCDH1-203ENST00000394536 FZD10Q9ULW2 581 aa16.34■□□□□ 0.21
PCDH1-203ENST00000394536 FAM149AA5PLN7 773 aa16.34■□□□□ 0.21
PCDH1-203ENST00000394536 CA8P35219 290 aa16.34■□□□□ 0.21
PCDH1-203ENST00000394536 SLC7A2P52569 658 aa16.34■□□□□ 0.21
PCDH1-203ENST00000394536 ZNF235Q14590 738 aa16.34■□□□□ 0.21
PCDH1-203ENST00000394536 SCIMPQ6UWF3 145 aa16.34■□□□□ 0.21
PCDH1-203ENST00000394536 LPPQ93052 612 aa16.34■□□□□ 0.21
PCDH1-203ENST00000394536 MPP6Q9NZW5 540 aa16.34■□□□□ 0.21
PCDH1-203ENST00000394536 PRPF19Q9UMS4 504 aaKnown RBP16.34■□□□□ 0.21
PCDH1-203ENST00000394536 PRRC2BQ5JSZ5 2229 aaKnown RBP16.33■□□□□ 0.21
PCDH1-203ENST00000394536 TMEM114B3SHH9 223 aa16.33■□□□□ 0.21
PCDH1-203ENST00000394536 SNNO75324 88 aaPredicted RBP16.33■□□□□ 0.21
PCDH1-203ENST00000394536 E2F6O75461 281 aa16.33■□□□□ 0.21
PCDH1-203ENST00000394536 METTL21CQ5VZV1 264 aa16.33■□□□□ 0.21
PCDH1-203ENST00000394536 CLEC6AQ6EIG7 209 aa16.33■□□□□ 0.21
PCDH1-203ENST00000394536 CLEC4FQ8N1N0 589 aa16.33■□□□□ 0.21
PCDH1-203ENST00000394536 CALML6Q8TD86 181 aa16.33■□□□□ 0.21
PCDH1-203ENST00000394536 FAM193BQ96PV7 902 aaPredicted RBP16.33■□□□□ 0.21
PCDH1-203ENST00000394536 COLEC11Q9BWP8 271 aa16.33■□□□□ 0.21
PCDH1-203ENST00000394536 IGKV6D-21A0A0A0MT36 114 aa16.33■□□□□ 0.2
PCDH1-203ENST00000394536 FAM72CH0Y354 149 aa16.33■□□□□ 0.2
PCDH1-203ENST00000394536 DNAJA2O60884 412 aa16.33■□□□□ 0.2
PCDH1-203ENST00000394536 LRIG2O94898 1065 aa16.33■□□□□ 0.2
PCDH1-203ENST00000394536 CRTAMO95727 393 aa16.33■□□□□ 0.2
PCDH1-203ENST00000394536 THP07101 528 aa16.33■□□□□ 0.2
PCDH1-203ENST00000394536 ZNF23P17027 643 aa16.33■□□□□ 0.2
PCDH1-203ENST00000394536 CHRNA4P43681 627 aa16.33■□□□□ 0.2
PCDH1-203ENST00000394536 TAS2R39P59534 338 aa16.33■□□□□ 0.2
PCDH1-203ENST00000394536 BEX3Q00994 111 aa16.33■□□□□ 0.2
PCDH1-203ENST00000394536 RBBP7Q16576 425 aa16.33■□□□□ 0.2
PCDH1-203ENST00000394536 PCID2Q5JVF3 399 aa16.33■□□□□ 0.2
PCDH1-203ENST00000394536 FAM72AQ5TYM5 149 aa16.33■□□□□ 0.2
PCDH1-203ENST00000394536 FAM72DQ6L9T8 149 aa16.33■□□□□ 0.2
PCDH1-203ENST00000394536 FAM72BQ86X60 149 aa16.33■□□□□ 0.2
PCDH1-203ENST00000394536 EGFL6Q8IUX8 553 aa16.33■□□□□ 0.2
PCDH1-203ENST00000394536 LPGAT1Q92604 370 aa16.33■□□□□ 0.2
PCDH1-203ENST00000394536 EMID1Q96A84 441 aaPredicted RBP16.33■□□□□ 0.2
PCDH1-203ENST00000394536 TSPYL2Q9H2G4 693 aaPredicted RBP16.33■□□□□ 0.2
PCDH1-203ENST00000394536 MID1IP1Q9NPA3 183 aa16.33■□□□□ 0.2
PCDH1-203ENST00000394536 RBPJLQ9UBG7 517 aa16.33■□□□□ 0.2
PCDH1-203ENST00000394536 ARFGEF1Q9Y6D6 1849 aa16.33■□□□□ 0.2
PCDH1-203ENST00000394536 CCL15-CCL14A0A0B4J2E2 113 aa16.33■□□□□ 0.2
PCDH1-203ENST00000394536 HDCP19113 662 aa16.33■□□□□ 0.2
PCDH1-203ENST00000394536 RPS6KA3P51812 740 aa16.33■□□□□ 0.2
PCDH1-203ENST00000394536 CSE1LP55060 971 aaKnown RBP16.33■□□□□ 0.2
PCDH1-203ENST00000394536 INCA1Q0VD86 236 aa16.33■□□□□ 0.2
PCDH1-203ENST00000394536 CCL15Q16663 113 aa16.33■□□□□ 0.2
PCDH1-203ENST00000394536 NAPRTQ6XQN6 538 aa16.33■□□□□ 0.2
PCDH1-203ENST00000394536 GPR141Q7Z602 305 aa16.33■□□□□ 0.2
PCDH1-203ENST00000394536 ZNF276Q8N554 614 aa16.33■□□□□ 0.2
PCDH1-203ENST00000394536 EFHBQ8N7U6 833 aa16.33■□□□□ 0.2
PCDH1-203ENST00000394536 LRTOMTQ8WZ04 291 aa16.33■□□□□ 0.2
PCDH1-203ENST00000394536 NCLNQ969V3 563 aa16.33■□□□□ 0.2
PCDH1-203ENST00000394536 SLC39A3Q9BRY0 314 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms