RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 LRRC49Q8IUZ0 686 aa19.32■□□□□ 0.68
PDLIM7-204ENST00000393546 TP53INP2Q8IXH6 220 aa19.32■□□□□ 0.68
PDLIM7-204ENST00000393546 DCLK2Q8N568 766 aa19.32■□□□□ 0.68
PDLIM7-204ENST00000393546 CADM4Q8NFZ8 388 aa19.32■□□□□ 0.68
PDLIM7-204ENST00000393546 OR2AP1Q8NGE2 309 aa19.32■□□□□ 0.68
PDLIM7-204ENST00000393546 KIAA1524Q8TCG1 905 aa19.32■□□□□ 0.68
PDLIM7-204ENST00000393546 RNF25Q96BH1 459 aaPredicted RBP19.32■□□□□ 0.68
PDLIM7-204ENST00000393546 ZNF419Q96HQ0 510 aaPredicted RBP19.32■□□□□ 0.68
PDLIM7-204ENST00000393546 NEUROG2Q9H2A3 272 aa19.32■□□□□ 0.68
PDLIM7-204ENST00000393546 FZD4Q9ULV1 537 aa19.32■□□□□ 0.68
PDLIM7-204ENST00000393546 ADGRG1Q9Y653 693 aa19.32■□□□□ 0.68
PDLIM7-204ENST00000393546 PIEZO1Q92508 2521 aa19.31■□□□□ 0.68
PDLIM7-204ENST00000393546 OTOGLQ3ZCN5 2332 aa19.31■□□□□ 0.68
PDLIM7-204ENST00000393546 CEP192Q8TEP8 1941 aa19.31■□□□□ 0.68
PDLIM7-204ENST00000393546 NYNRINQ9P2P1 1898 aaKnown RBP19.31■□□□□ 0.68
PDLIM7-204ENST00000393546 BCLAF3A2AJT9 711 aaKnown RBP19.31■□□□□ 0.68
PDLIM7-204ENST00000393546 KPNA3O00505 521 aaPredicted RBP19.31■□□□□ 0.68
PDLIM7-204ENST00000393546 PALMO75781 387 aa19.31■□□□□ 0.68
PDLIM7-204ENST00000393546 POP4O95707 220 aaKnown RBP19.31■□□□□ 0.68
PDLIM7-204ENST00000393546 IGSF6O95976 241 aa19.31■□□□□ 0.68
PDLIM7-204ENST00000393546 CTSLP07711 333 aa19.31■□□□□ 0.68
PDLIM7-204ENST00000393546 HOXD11P31277 338 aaPredicted RBP19.31■□□□□ 0.68
PDLIM7-204ENST00000393546 PTGER3P43115 390 aa19.31■□□□□ 0.68
PDLIM7-204ENST00000393546 RAD51Q06609 339 aa19.31■□□□□ 0.68
PDLIM7-204ENST00000393546 ZNF33AQ06730 810 aa19.31■□□□□ 0.68
PDLIM7-204ENST00000393546 CCDC15Q0P6D6 951 aa19.31■□□□□ 0.68
PDLIM7-204ENST00000393546 RFTN1Q14699 578 aaPredicted RBP19.31■□□□□ 0.68
PDLIM7-204ENST00000393546 MYLK3Q32MK0 819 aa19.31■□□□□ 0.68
PDLIM7-204ENST00000393546 SYCP2LQ5T4T6 812 aa19.31■□□□□ 0.68
PDLIM7-204ENST00000393546 LYSMD4Q5XG99 296 aa19.31■□□□□ 0.68
PDLIM7-204ENST00000393546 NCBP2-AS2Q69YL0 99 aa19.31■□□□□ 0.68
PDLIM7-204ENST00000393546 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.31■□□□□ 0.68
PDLIM7-204ENST00000393546 ARHGAP36Q6ZRI8 547 aa19.31■□□□□ 0.68
PDLIM7-204ENST00000393546 CYP2U1Q7Z449 544 aa19.31■□□□□ 0.68
PDLIM7-204ENST00000393546 ATPAF2Q8N5M1 289 aa19.31■□□□□ 0.68
PDLIM7-204ENST00000393546 AADATQ8N5Z0 425 aa19.31■□□□□ 0.68
PDLIM7-204ENST00000393546 PQLC3Q8N755 202 aa19.31■□□□□ 0.68
PDLIM7-204ENST00000393546 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.31■□□□□ 0.68
PDLIM7-204ENST00000393546 GDAP1L1Q96MZ0 367 aa19.31■□□□□ 0.68
PDLIM7-204ENST00000393546 ZNF599Q96NL3 588 aa19.31■□□□□ 0.68
PDLIM7-204ENST00000393546 PCED1AQ9H1Q7 454 aa19.31■□□□□ 0.68
PDLIM7-204ENST00000393546 DYRK4Q9NR20 520 aa19.31■□□□□ 0.68
PDLIM7-204ENST00000393546 GON4LQ3T8J9 2241 aa19.31■□□□□ 0.68
PDLIM7-204ENST00000393546 PTPRZ1P23471 2315 aaPredicted RBP19.3■□□□□ 0.68
PDLIM7-204ENST00000393546 EP300Q09472 2414 aaPredicted RBP19.3■□□□□ 0.68
PDLIM7-204ENST00000393546 MACROD2A1Z1Q3 448 aa19.3■□□□□ 0.68
PDLIM7-204ENST00000393546 C3orf70A6NLC5 250 aaPredicted RBP19.3■□□□□ 0.68
PDLIM7-204ENST00000393546 LRP3O75074 770 aa19.3■□□□□ 0.68
PDLIM7-204ENST00000393546 LEFTY1O75610 366 aa19.3■□□□□ 0.68
PDLIM7-204ENST00000393546 SEMA4FO95754 770 aa19.3■□□□□ 0.68
PDLIM7-204ENST00000393546 DPP6P42658 865 aa19.3■□□□□ 0.68
PDLIM7-204ENST00000393546 POM121L1PQ3SYA9 428 aa19.3■□□□□ 0.68
PDLIM7-204ENST00000393546 SLC41A1Q8IVJ1 513 aa19.3■□□□□ 0.68
PDLIM7-204ENST00000393546 GPR161Q8N6U8 529 aaKnown RBP19.3■□□□□ 0.68
PDLIM7-204ENST00000393546 GRIN3AQ8TCU5 1115 aa19.3■□□□□ 0.68
PDLIM7-204ENST00000393546 NSMCE1Q8WV22 266 aa19.3■□□□□ 0.68
PDLIM7-204ENST00000393546 PPP1R16AQ96I34 528 aa19.3■□□□□ 0.68
PDLIM7-204ENST00000393546 LRIG1Q96JA1 1093 aa19.3■□□□□ 0.68
PDLIM7-204ENST00000393546 HSPA12BQ96MM6 686 aa19.3■□□□□ 0.68
PDLIM7-204ENST00000393546 TSGA10Q9BZW7 698 aa19.3■□□□□ 0.68
PDLIM7-204ENST00000393546 ZDHHC6Q9H6R6 413 aa19.3■□□□□ 0.68
PDLIM7-204ENST00000393546 SERGEFQ9UGK8 458 aa19.3■□□□□ 0.68
PDLIM7-204ENST00000393546 WASF2Q9Y6W5 498 aa19.3■□□□□ 0.68
PDLIM7-204ENST00000393546 FAM186AA6NE01 2351 aa19.3■□□□□ 0.68
PDLIM7-204ENST00000393546 RALGAPA1Q6GYQ0 2036 aa19.3■□□□□ 0.68
PDLIM7-204ENST00000393546 LRRC72A6NJI9 287 aa19.29■□□□□ 0.68
PDLIM7-204ENST00000393546 METTL12A8MUP2 240 aa19.29■□□□□ 0.68
PDLIM7-204ENST00000393546 KRIT1O00522 736 aa19.29■□□□□ 0.68
PDLIM7-204ENST00000393546 SLC7A4O43246 635 aa19.29■□□□□ 0.68
PDLIM7-204ENST00000393546 MAFKO60675 156 aa19.29■□□□□ 0.68
PDLIM7-204ENST00000393546 ZRANB2O95218 330 aaKnown RBP eCLIP19.29■□□□□ 0.682e-6■■■□□ 18.6
PDLIM7-204ENST00000393546 ZFXP17010 805 aaPredicted RBP19.29■□□□□ 0.68
PDLIM7-204ENST00000393546 DRD3P35462 400 aa19.29■□□□□ 0.68
PDLIM7-204ENST00000393546 METAP1P53582 386 aa19.29■□□□□ 0.68
PDLIM7-204ENST00000393546 SPEM2Q0P670 501 aa19.29■□□□□ 0.68
PDLIM7-204ENST00000393546 CNTN1Q12860 1018 aa19.29■□□□□ 0.68
PDLIM7-204ENST00000393546 NUMA1Q14980 2115 aa19.29■□□□□ 0.68
PDLIM7-204ENST00000393546 WDR45BQ5MNZ6 344 aa19.29■□□□□ 0.68
PDLIM7-204ENST00000393546 ATXN7L2Q5T6C5 722 aaPredicted RBP19.29■□□□□ 0.68
PDLIM7-204ENST00000393546 TMCO4Q5TGY1 634 aa19.29■□□□□ 0.68
PDLIM7-204ENST00000393546 MFSD7Q6UXD7 560 aa19.29■□□□□ 0.68
PDLIM7-204ENST00000393546 RFX6Q8HWS3 928 aa19.29■□□□□ 0.68
PDLIM7-204ENST00000393546 KATNAL2Q8IYT4 538 aa19.29■□□□□ 0.68
PDLIM7-204ENST00000393546 RCOR2Q8IZ40 523 aa19.29■□□□□ 0.68
PDLIM7-204ENST00000393546 RGL4Q8IZJ4 473 aa19.29■□□□□ 0.68
PDLIM7-204ENST00000393546 SYCE1Q8N0S2 351 aa19.29■□□□□ 0.68
PDLIM7-204ENST00000393546 RNF10Q8N5U6 811 aaKnown RBP19.29■□□□□ 0.68
PDLIM7-204ENST00000393546 OR6K2Q8NGY2 324 aa19.29■□□□□ 0.68
PDLIM7-204ENST00000393546 OR14C36Q8NHC7 312 aa19.29■□□□□ 0.68
PDLIM7-204ENST00000393546 PIGKQ92643 395 aa19.29■□□□□ 0.68
PDLIM7-204ENST00000393546 CINPQ9BW66 212 aaPredicted RBP19.29■□□□□ 0.68
PDLIM7-204ENST00000393546 LHX3Q9UBR4 397 aa19.29■□□□□ 0.68
PDLIM7-204ENST00000393546 TRIM10Q9UDY6 481 aa19.29■□□□□ 0.68
PDLIM7-204ENST00000393546 A0A0U1RQJ8 604 aa19.28■□□□□ 0.68
PDLIM7-204ENST00000393546 FAM47DPA6NHR8 397 aa19.28■□□□□ 0.68
PDLIM7-204ENST00000393546 MEI4A8MW99 385 aa19.28■□□□□ 0.68
PDLIM7-204ENST00000393546 PLK4O00444 970 aa19.28■□□□□ 0.68
PDLIM7-204ENST00000393546 APOL1O14791 398 aa19.28■□□□□ 0.68
PDLIM7-204ENST00000393546 KRT86O43790 486 aa19.28■□□□□ 0.68
PDLIM7-204ENST00000393546 MFSD11O43934 449 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms