RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 OTOP3Q7RTS5 596 aa19.12■□□□□ 0.65
CBX1-202ENST00000393408 ARPINQ7Z6K5 226 aa19.12■□□□□ 0.65
CBX1-202ENST00000393408 LINC00523Q86TU6 105 aa19.12■□□□□ 0.65
CBX1-202ENST00000393408 FAM35AQ86V20 835 aa19.12■□□□□ 0.65
CBX1-202ENST00000393408 SLC41A1Q8IVJ1 513 aa19.12■□□□□ 0.65
CBX1-202ENST00000393408 HAPLN3Q96S86 360 aa19.12■□□□□ 0.65
CBX1-202ENST00000393408 CACNG3O60359 315 aa19.12■□□□□ 0.65
CBX1-202ENST00000393408 DLX3O60479 287 aa19.12■□□□□ 0.65
CBX1-202ENST00000393408 LRIG2O94898 1065 aa19.12■□□□□ 0.65
CBX1-202ENST00000393408 F2P00734 622 aa19.12■□□□□ 0.65
CBX1-202ENST00000393408 ZNF135P52742 658 aaPredicted RBP19.12■□□□□ 0.65
CBX1-202ENST00000393408 MRPS22P82650 360 aaKnown RBP19.12■□□□□ 0.65
CBX1-202ENST00000393408 CEACAM7Q14002 265 aa19.12■□□□□ 0.65
CBX1-202ENST00000393408 IQSEC1Q6DN90 963 aa19.12■□□□□ 0.65
CBX1-202ENST00000393408 ZFP1Q6P2D0 407 aa19.12■□□□□ 0.65
CBX1-202ENST00000393408 TMEM126BQ8IUX1 230 aa19.12■□□□□ 0.65
CBX1-202ENST00000393408 MAML3Q96JK9 1138 aa19.12■□□□□ 0.65
CBX1-202ENST00000393408 ZBTB26Q9HCK0 441 aa19.12■□□□□ 0.65
CBX1-202ENST00000393408 RIMS3Q9UJD0 308 aa19.12■□□□□ 0.65
CBX1-202ENST00000393408 PSMD3O43242 534 aa19.11■□□□□ 0.65
CBX1-202ENST00000393408 CXCR3P49682 368 aa19.11■□□□□ 0.65
CBX1-202ENST00000393408 ADGRE1Q14246 886 aa19.11■□□□□ 0.65
CBX1-202ENST00000393408 BHLHA9Q7RTU4 235 aa19.11■□□□□ 0.65
CBX1-202ENST00000393408 DPP9Q86TI2 863 aa19.11■□□□□ 0.65
CBX1-202ENST00000393408 CNTN4Q8IWV2 1026 aa19.11■□□□□ 0.65
CBX1-202ENST00000393408 CELF6Q96J87 481 aaKnown RBP19.11■□□□□ 0.65
CBX1-202ENST00000393408 GPR78Q96P69 363 aa19.11■□□□□ 0.65
CBX1-202ENST00000393408 TKTL2Q9H0I9 626 aa19.11■□□□□ 0.65
CBX1-202ENST00000393408 ABHD16BQ9H3Z7 469 aa19.11■□□□□ 0.65
CBX1-202ENST00000393408 WDCPQ9H6R7 721 aa19.11■□□□□ 0.65
CBX1-202ENST00000393408 XPR1Q9UBH6 696 aa19.11■□□□□ 0.65
CBX1-202ENST00000393408 ACOT9Q9Y305 439 aa19.11■□□□□ 0.65
CBX1-202ENST00000393408 COMMD3-BMI1R4GMX3 469 aa19.11■□□□□ 0.65
CBX1-202ENST00000393408 TRIP12Q14669 1992 aaPredicted RBP19.11■□□□□ 0.65
CBX1-202ENST00000393408 DNAJA2O60884 412 aa19.11■□□□□ 0.65
CBX1-202ENST00000393408 PGK1P00558 417 aa19.11■□□□□ 0.65
CBX1-202ENST00000393408 F9P00740 461 aa19.11■□□□□ 0.65
CBX1-202ENST00000393408 SMIM18P0DKX4 95 aa19.11■□□□□ 0.65
CBX1-202ENST00000393408 DPP6P42658 865 aa19.11■□□□□ 0.65
CBX1-202ENST00000393408 PKNOX1P55347 436 aa19.11■□□□□ 0.65
CBX1-202ENST00000393408 MS4A2Q01362 244 aa19.11■□□□□ 0.65
CBX1-202ENST00000393408 DYNC1I2Q13409 638 aaKnown RBP19.11■□□□□ 0.65
CBX1-202ENST00000393408 NXNQ6DKJ4 435 aa19.11■□□□□ 0.65
CBX1-202ENST00000393408 PKN3Q6P5Z2 889 aa19.11■□□□□ 0.65
CBX1-202ENST00000393408 NAT14Q8WUY8 206 aa19.11■□□□□ 0.65
CBX1-202ENST00000393408 TSGA13Q96PP4 275 aa19.11■□□□□ 0.65
CBX1-202ENST00000393408 PPP1R10Q96QC0 940 aaKnown RBP19.11■□□□□ 0.65
CBX1-202ENST00000393408 WDR41Q9HAD4 459 aa19.11■□□□□ 0.65
CBX1-202ENST00000393408 RRN3Q9NYV6 651 aa19.11■□□□□ 0.65
CBX1-202ENST00000393408 MYLKQ15746 1914 aa19.1■□□□□ 0.65
CBX1-202ENST00000393408 MYBPHLA2RUH7 354 aa19.1■□□□□ 0.65
CBX1-202ENST00000393408 TADA2AO75478 443 aa19.1■□□□□ 0.65
CBX1-202ENST00000393408 RTN3O95197 1032 aaPredicted RBP19.1■□□□□ 0.65
CBX1-202ENST00000393408 ENO3P13929 434 aaPredicted RBP19.1■□□□□ 0.65
CBX1-202ENST00000393408 MSX2P35548 267 aaPredicted RBP19.1■□□□□ 0.65
CBX1-202ENST00000393408 UGP2Q16851 508 aa19.1■□□□□ 0.65
CBX1-202ENST00000393408 PCID2Q5JVF3 399 aa19.1■□□□□ 0.65
CBX1-202ENST00000393408 RARS2Q5T160 578 aaKnown RBP19.1■□□□□ 0.65
CBX1-202ENST00000393408 TSTD2Q5T7W7 516 aa19.1■□□□□ 0.65
CBX1-202ENST00000393408 PM20D1Q6GTS8 502 aa19.1■□□□□ 0.65
CBX1-202ENST00000393408 TICAM1Q8IUC6 712 aa19.1■□□□□ 0.65
CBX1-202ENST00000393408 MFSD6LQ8IWD5 586 aa19.1■□□□□ 0.65
CBX1-202ENST00000393408 PDCD6IPQ8WUM4 868 aaKnown RBP19.1■□□□□ 0.65
CBX1-202ENST00000393408 EDEM1Q92611 657 aa19.1■□□□□ 0.65
CBX1-202ENST00000393408 PCED1BQ96HM7 432 aa19.1■□□□□ 0.65
CBX1-202ENST00000393408 MARK4Q96L34 752 aa19.1■□□□□ 0.65
CBX1-202ENST00000393408 LRGUKQ96M69 825 aa19.1■□□□□ 0.65
CBX1-202ENST00000393408 TINF2Q9BSI4 451 aa19.1■□□□□ 0.65
CBX1-202ENST00000393408 BCAP29Q9UHQ4 241 aa19.1■□□□□ 0.65
CBX1-202ENST00000393408 COPG1Q9Y678 874 aaKnown RBP19.1■□□□□ 0.65
CBX1-202ENST00000393408 HHLA1C9JL84 531 aa19.1■□□□□ 0.65
CBX1-202ENST00000393408 CFLARO15519 480 aa19.1■□□□□ 0.65
CBX1-202ENST00000393408 RAB10P61026 200 aa19.1■□□□□ 0.65
CBX1-202ENST00000393408 ADAM17P78536 824 aa19.1■□□□□ 0.65
CBX1-202ENST00000393408 MPP1Q00013 466 aa19.1■□□□□ 0.65
CBX1-202ENST00000393408 ZNF460Q14592 562 aa19.1■□□□□ 0.65
CBX1-202ENST00000393408 RFTN1Q14699 578 aaPredicted RBP19.1■□□□□ 0.65
CBX1-202ENST00000393408 PDCD2Q16342 344 aaPredicted RBP19.1■□□□□ 0.65
CBX1-202ENST00000393408 SATL1Q86VE3 508 aa19.1■□□□□ 0.65
CBX1-202ENST00000393408 CEP97Q8IW35 865 aa19.1■□□□□ 0.65
CBX1-202ENST00000393408 DENND6AQ8IWF6 608 aa19.1■□□□□ 0.65
CBX1-202ENST00000393408 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.1■□□□□ 0.65
CBX1-202ENST00000393408 KDM1BQ8NB78 822 aa19.1■□□□□ 0.65
CBX1-202ENST00000393408 SPATA22Q8NHS9 363 aa19.1■□□□□ 0.65
CBX1-202ENST00000393408 USP33Q8TEY7 942 aa19.1■□□□□ 0.65
CBX1-202ENST00000393408 USP13Q92995 863 aaPredicted RBP19.1■□□□□ 0.65
CBX1-202ENST00000393408 SENP8Q96LD8 212 aa19.1■□□□□ 0.65
CBX1-202ENST00000393408 ZFP42Q96MM3 310 aa19.1■□□□□ 0.65
CBX1-202ENST00000393408 EPB41L1Q9H4G0 881 aa19.1■□□□□ 0.65
CBX1-202ENST00000393408 EFCAB1Q9HAE3 211 aa19.1■□□□□ 0.65
CBX1-202ENST00000393408 VCX3AQ9NNX9 186 aa19.1■□□□□ 0.65
CBX1-202ENST00000393408 CACNG4Q9UBN1 327 aa19.1■□□□□ 0.65
CBX1-202ENST00000393408 RAB26Q9ULW5 256 aa19.1■□□□□ 0.65
CBX1-202ENST00000393408 SMIM31A0A1B0GVY4 71 aa19.09■□□□□ 0.65
CBX1-202ENST00000393408 DYNC1LI2O43237 492 aaPredicted RBP19.09■□□□□ 0.65
CBX1-202ENST00000393408 ME2P23368 584 aa19.09■□□□□ 0.65
CBX1-202ENST00000393408 POLD2P49005 469 aa19.09■□□□□ 0.65
CBX1-202ENST00000393408 CNGA3Q16281 694 aa19.09■□□□□ 0.65
CBX1-202ENST00000393408 BHLHE22Q8NFJ8 381 aaPredicted RBP19.09■□□□□ 0.65
CBX1-202ENST00000393408 NXNL1Q96CM4 212 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms