RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 C9orf47Q6ZRZ4 202 aa3.28□□□□□ -1.88
RNU6-550P-201ENST00000391057 ADGRG6Q86SQ4 1221 aa3.28□□□□□ -1.88
RNU6-550P-201ENST00000391057 GLCCI1Q86VQ1 547 aa3.28□□□□□ -1.88
RNU6-550P-201ENST00000391057 PALB2Q86YC2 1186 aa3.28□□□□□ -1.88
RNU6-550P-201ENST00000391057 TMC8Q8IU68 726 aa3.28□□□□□ -1.88
RNU6-550P-201ENST00000391057 RFWD2Q8NHY2 731 aa3.28□□□□□ -1.88
RNU6-550P-201ENST00000391057 CEP76Q8TAP6 659 aa3.28□□□□□ -1.88
RNU6-550P-201ENST00000391057 RAB40AQ8WXH6 277 aa3.28□□□□□ -1.88
RNU6-550P-201ENST00000391057 PPM1EQ8WY54 764 aa3.28□□□□□ -1.88
RNU6-550P-201ENST00000391057 CNOT9Q92600 299 aaKnown RBP3.28□□□□□ -1.88
RNU6-550P-201ENST00000391057 ATOH1Q92858 354 aaPredicted RBP3.28□□□□□ -1.88
RNU6-550P-201ENST00000391057 WACQ9BTA9 647 aa3.28□□□□□ -1.88
RNU6-550P-201ENST00000391057 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.28□□□□□ -1.88
RNU6-550P-201ENST00000391057 POLDIP3Q9BY77 421 aaKnown RBP3.28□□□□□ -1.88
RNU6-550P-201ENST00000391057 GPR63Q9BZJ6 419 aa3.28□□□□□ -1.88
RNU6-550P-201ENST00000391057 LMAN2LQ9H0V9 348 aa3.28□□□□□ -1.88
RNU6-550P-201ENST00000391057 EPHX3Q9H6B9 360 aa3.28□□□□□ -1.88
RNU6-550P-201ENST00000391057 CATSPERBQ9H7T0 1116 aa3.28□□□□□ -1.88
RNU6-550P-201ENST00000391057 PLAC1Q9HBJ0 212 aa3.28□□□□□ -1.88
RNU6-550P-201ENST00000391057 SAGE1Q9NXZ1 904 aa3.28□□□□□ -1.88
RNU6-550P-201ENST00000391057 IFT80Q9P2H3 777 aaPredicted RBP3.28□□□□□ -1.88
RNU6-550P-201ENST00000391057 INSL5Q9Y5Q6 135 aa3.28□□□□□ -1.88
RNU6-550P-201ENST00000391057 FAM157AC9JC47 383 aa3.27□□□□□ -1.89
RNU6-550P-201ENST00000391057 MS4A18H0YCH9 400 aa3.27□□□□□ -1.89
RNU6-550P-201ENST00000391057 EYA2O00167 538 aa3.27□□□□□ -1.89
RNU6-550P-201ENST00000391057 PER2O15055 1255 aa3.27□□□□□ -1.89
RNU6-550P-201ENST00000391057 CEP104O60308 925 aa3.27□□□□□ -1.89
RNU6-550P-201ENST00000391057 GUCY1B2O75343 617 aa3.27□□□□□ -1.89
RNU6-550P-201ENST00000391057 IFIT1P09914 478 aaKnown RBP3.27□□□□□ -1.89
RNU6-550P-201ENST00000391057 PSMC2P35998 433 aaKnown RBP3.27□□□□□ -1.89
RNU6-550P-201ENST00000391057 PGM1P36871 562 aa3.27□□□□□ -1.89
RNU6-550P-201ENST00000391057 GPD2P43304 727 aa3.27□□□□□ -1.89
RNU6-550P-201ENST00000391057 RFX2P48378 723 aa3.27□□□□□ -1.89
RNU6-550P-201ENST00000391057 ARSFP54793 590 aa3.27□□□□□ -1.89
RNU6-550P-201ENST00000391057 ROR2Q01974 943 aaKnown RBP3.27□□□□□ -1.89
RNU6-550P-201ENST00000391057 TLE2Q04725 743 aa3.27□□□□□ -1.89
RNU6-550P-201ENST00000391057 FHL1Q13642 323 aa3.27□□□□□ -1.89
RNU6-550P-201ENST00000391057 EDRF1Q3B7T1 1238 aa3.27□□□□□ -1.89
RNU6-550P-201ENST00000391057 FBXO43Q4G163 708 aa3.27□□□□□ -1.89
RNU6-550P-201ENST00000391057 IL20RBQ6UXL0 311 aa3.27□□□□□ -1.89
RNU6-550P-201ENST00000391057 LRRC8DQ7L1W4 858 aa3.27□□□□□ -1.89
RNU6-550P-201ENST00000391057 PELI3Q8N2H9 469 aa3.27□□□□□ -1.89
RNU6-550P-201ENST00000391057 LSM14AQ8ND56 463 aaKnown RBP3.27□□□□□ -1.89
RNU6-550P-201ENST00000391057 TNIP2Q8NFZ5 429 aa3.27□□□□□ -1.89
RNU6-550P-201ENST00000391057 NOC3LQ8WTT2 800 aaKnown RBP3.27□□□□□ -1.89
RNU6-550P-201ENST00000391057 SLC35F5Q8WV83 523 aa3.27□□□□□ -1.89
RNU6-550P-201ENST00000391057 URB1-AS1Q96HZ7 61 aa3.27□□□□□ -1.89
RNU6-550P-201ENST00000391057 MAELQ96JY0 434 aaKnown RBP3.27□□□□□ -1.89
RNU6-550P-201ENST00000391057 APOLD1Q96LR9 279 aa3.27□□□□□ -1.89
RNU6-550P-201ENST00000391057 GFM1Q96RP9 751 aaKnown RBP3.27□□□□□ -1.89
RNU6-550P-201ENST00000391057 LHPPQ9H008 270 aa3.27□□□□□ -1.89
RNU6-550P-201ENST00000391057 WDR6Q9NNW5 1121 aaKnown RBP3.27□□□□□ -1.89
RNU6-550P-201ENST00000391057 HIF1ANQ9NWT6 349 aa3.27□□□□□ -1.89
RNU6-550P-201ENST00000391057 TMEM160Q9NX00 188 aa3.27□□□□□ -1.89
RNU6-550P-201ENST00000391057 HSF4Q9ULV5 492 aa3.27□□□□□ -1.89
RNU6-550P-201ENST00000391057 FZD10Q9ULW2 581 aa3.27□□□□□ -1.89
RNU6-550P-201ENST00000391057 SRPRBQ9Y5M8 271 aaKnown RBP3.27□□□□□ -1.89
RNU6-550P-201ENST00000391057 LRRFIP2Q9Y608 721 aaKnown RBP3.27□□□□□ -1.89
RNU6-550P-201ENST00000391057 C17orf113A0A1B0GUU1 675 aa3.26□□□□□ -1.89
RNU6-550P-201ENST00000391057 FAM90A8PA6NJQ4 464 aa3.26□□□□□ -1.89
RNU6-550P-201ENST00000391057 NPHP1O15259 732 aa3.26□□□□□ -1.89
RNU6-550P-201ENST00000391057 SPRY3O43610 288 aa3.26□□□□□ -1.89
RNU6-550P-201ENST00000391057 SLC25A17O43808 307 aa3.26□□□□□ -1.89
RNU6-550P-201ENST00000391057 ALPLP05186 524 aa3.26□□□□□ -1.89
RNU6-550P-201ENST00000391057 POLBP06746 335 aa3.26□□□□□ -1.89
RNU6-550P-201ENST00000391057 FAM90A13PP0C7W8 464 aa3.26□□□□□ -1.89
RNU6-550P-201ENST00000391057 FAM90A24PP0C7X0 464 aa3.26□□□□□ -1.89
RNU6-550P-201ENST00000391057 HTR6P50406 440 aa3.26□□□□□ -1.89
RNU6-550P-201ENST00000391057 FOXG1P55316 489 aaPredicted RBP3.26□□□□□ -1.89
RNU6-550P-201ENST00000391057 VAMP2P63027 116 aa3.26□□□□□ -1.89
RNU6-550P-201ENST00000391057 NFIL3Q16649 462 aa3.26□□□□□ -1.89
RNU6-550P-201ENST00000391057 DNTTIP2Q5QJE6 756 aaKnown RBP3.26□□□□□ -1.89
RNU6-550P-201ENST00000391057 CHD1LQ86WJ1 897 aa3.26□□□□□ -1.89
RNU6-550P-201ENST00000391057 OR4N2Q8NGD1 307 aa3.26□□□□□ -1.89
RNU6-550P-201ENST00000391057 TMEM163Q8TC26 289 aa3.26□□□□□ -1.89
RNU6-550P-201ENST00000391057 TBC1D22AQ8WUA7 517 aa3.26□□□□□ -1.89
RNU6-550P-201ENST00000391057 OIT3Q8WWZ8 545 aa3.26□□□□□ -1.89
RNU6-550P-201ENST00000391057 TMEM18Q96B42 140 aa3.26□□□□□ -1.89
RNU6-550P-201ENST00000391057 EYA3Q99504 573 aa3.26□□□□□ -1.89
RNU6-550P-201ENST00000391057 CLSTN3Q9BQT9 956 aa3.26□□□□□ -1.89
RNU6-550P-201ENST00000391057 PHF7Q9BWX1 381 aaPredicted RBP3.26□□□□□ -1.89
RNU6-550P-201ENST00000391057 DCLK3Q9C098 648 aa3.26□□□□□ -1.89
RNU6-550P-201ENST00000391057 INTS2Q9H0H0 1204 aaKnown RBP3.26□□□□□ -1.89
RNU6-550P-201ENST00000391057 SLC32A1Q9H598 525 aa3.26□□□□□ -1.89
RNU6-550P-201ENST00000391057 PLK2Q9NYY3 685 aa3.26□□□□□ -1.89
RNU6-550P-201ENST00000391057 CNOT7Q9UIV1 285 aaKnown RBP3.26□□□□□ -1.89
RNU6-550P-201ENST00000391057 MYO6Q9UM54 1294 aa3.26□□□□□ -1.89
RNU6-550P-201ENST00000391057 TTC3P53804 2025 aa3.26□□□□□ -1.89
RNU6-550P-201ENST00000391057 GOLGA6L10A0A0M3HER8 536 aa3.25□□□□□ -1.89
RNU6-550P-201ENST00000391057 CCDC196A0A1B0GTZ2 297 aa3.25□□□□□ -1.89
RNU6-550P-201ENST00000391057 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.25□□□□□ -1.89
RNU6-550P-201ENST00000391057 ARHGAP10A1A4S6 786 aa3.25□□□□□ -1.89
RNU6-550P-201ENST00000391057 BECN2A8MW95 431 aa3.25□□□□□ -1.89
RNU6-550P-201ENST00000391057 I6L893 689 aaPredicted RBP3.25□□□□□ -1.89
RNU6-550P-201ENST00000391057 VWA5AO00534 786 aa3.25□□□□□ -1.89
RNU6-550P-201ENST00000391057 RGS14O43566 566 aa3.25□□□□□ -1.89
RNU6-550P-201ENST00000391057 LDB2O43679 373 aa3.25□□□□□ -1.89
RNU6-550P-201ENST00000391057 LIASO43766 372 aa3.25□□□□□ -1.89
RNU6-550P-201ENST00000391057 LCATP04180 440 aa3.25□□□□□ -1.89
RNU6-550P-201ENST00000391057 HNRNPA1P09651 372 aaKnown RBP eCLIP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms