RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 CEP85LQ5SZL2 805 aa27.24■■□□□ 1.95
MSX1-201ENST00000382723 KDELC2Q7Z4H8 507 aa27.24■■□□□ 1.95
MSX1-201ENST00000382723 PRPF39Q86UA1 669 aaKnown RBP27.24■■□□□ 1.95
MSX1-201ENST00000382723 NAT16Q8N8M0 369 aa27.24■■□□□ 1.95
MSX1-201ENST00000382723 DNAAF3Q8N9W5 541 aa27.24■■□□□ 1.95
MSX1-201ENST00000382723 ASIC4Q96FT7 647 aa27.24■■□□□ 1.95
MSX1-201ENST00000382723 ZFYVE19Q96K21 471 aa27.24■■□□□ 1.95
MSX1-201ENST00000382723 PPP1R2P1Q96PQ5 205 aa27.24■■□□□ 1.95
MSX1-201ENST00000382723 MYADMQ96S97 322 aa27.24■■□□□ 1.95
MSX1-201ENST00000382723 MAD1L1Q9Y6D9 718 aa27.24■■□□□ 1.95
MSX1-201ENST00000382723 TMEM265A0A087WTH1 108 aa27.24■■□□□ 1.95
MSX1-201ENST00000382723 HLA-FP30511 346 aa27.24■■□□□ 1.95
MSX1-201ENST00000382723 ZNF844Q08AG5 666 aa27.24■■□□□ 1.95
MSX1-201ENST00000382723 GPS2Q13227 327 aa27.24■■□□□ 1.95
MSX1-201ENST00000382723 CYTH1Q15438 398 aa27.24■■□□□ 1.95
MSX1-201ENST00000382723 PCSK7Q16549 785 aa27.24■■□□□ 1.95
MSX1-201ENST00000382723 TANGO2Q6ICL3 276 aa27.24■■□□□ 1.95
MSX1-201ENST00000382723 RIPOR3Q96MK2 946 aa27.24■■□□□ 1.95
MSX1-201ENST00000382723 SEMA3CQ99985 751 aa27.24■■□□□ 1.95
MSX1-201ENST00000382723 C2orf49Q9BVC5 232 aaPredicted RBP27.24■■□□□ 1.95
MSX1-201ENST00000382723 AGTP01019 485 aa27.23■■□□□ 1.95
MSX1-201ENST00000382723 FCARP24071 287 aa27.23■■□□□ 1.95
MSX1-201ENST00000382723 MGAT1P26572 445 aa27.23■■□□□ 1.95
MSX1-201ENST00000382723 GBP2P32456 591 aaPredicted RBP27.23■■□□□ 1.95
MSX1-201ENST00000382723 LTBRP36941 435 aa27.23■■□□□ 1.95
MSX1-201ENST00000382723 CRADDP78560 199 aa27.23■■□□□ 1.95
MSX1-201ENST00000382723 DHCR24Q15392 516 aa27.23■■□□□ 1.95
MSX1-201ENST00000382723 PLEKHG6Q3KR16 790 aa27.23■■□□□ 1.95
MSX1-201ENST00000382723 ASTLQ6HA08 431 aaPredicted RBP27.23■■□□□ 1.95
MSX1-201ENST00000382723 KLHDC8BQ8IXV7 354 aa27.23■■□□□ 1.95
MSX1-201ENST00000382723 ARRDC2Q8TBH0 407 aa27.23■■□□□ 1.95
MSX1-201ENST00000382723 CFAP36Q96G28 342 aa27.23■■□□□ 1.95
MSX1-201ENST00000382723 EXOC2Q96KP1 924 aa27.23■■□□□ 1.95
MSX1-201ENST00000382723 SIGLEC10Q96LC7 697 aa27.23■■□□□ 1.95
MSX1-201ENST00000382723 FICDQ9BVA6 458 aa27.23■■□□□ 1.95
MSX1-201ENST00000382723 TRPV4Q9HBA0 871 aa27.23■■□□□ 1.95
MSX1-201ENST00000382723 CHD5Q8TDI0 1954 aa27.22■■□□□ 1.95
MSX1-201ENST00000382723 CD160O95971 181 aa27.22■■□□□ 1.95
MSX1-201ENST00000382723 CPP00450 1065 aa27.22■■□□□ 1.95
MSX1-201ENST00000382723 MMP2P08253 660 aa27.22■■□□□ 1.95
MSX1-201ENST00000382723 SSTR1P30872 391 aa27.22■■□□□ 1.95
MSX1-201ENST00000382723 GPX6P59796 221 aa27.22■■□□□ 1.95
MSX1-201ENST00000382723 EML3Q32P44 896 aa27.22■■□□□ 1.95
MSX1-201ENST00000382723 NAPEPLDQ6IQ20 393 aa27.22■■□□□ 1.95
MSX1-201ENST00000382723 RNF135Q8IUD6 432 aa27.22■■□□□ 1.95
MSX1-201ENST00000382723 ATP11CQ8NB49 1132 aa27.22■■□□□ 1.95
MSX1-201ENST00000382723 LMLNQ96KR4 655 aa27.22■■□□□ 1.95
MSX1-201ENST00000382723 PSKH2Q96QS6 385 aa27.22■■□□□ 1.95
MSX1-201ENST00000382723 TBL1YQ9BQ87 522 aa27.22■■□□□ 1.95
MSX1-201ENST00000382723 FSD1LQ9BXM9 530 aa27.22■■□□□ 1.95
MSX1-201ENST00000382723 ZFP14Q9HCL3 533 aa27.22■■□□□ 1.95
MSX1-201ENST00000382723 CASS4Q9NQ75 786 aa27.22■■□□□ 1.95
MSX1-201ENST00000382723 HAUS2Q9NVX0 235 aa27.22■■□□□ 1.95
MSX1-201ENST00000382723 INTS6Q9UL03 887 aaKnown RBP27.22■■□□□ 1.95
MSX1-201ENST00000382723 NUP210Q8TEM1 1887 aaPredicted RBP27.22■■□□□ 1.95
MSX1-201ENST00000382723 TMCC1O94876 653 aa27.22■■□□□ 1.95
MSX1-201ENST00000382723 CYP17A1P05093 508 aa27.22■■□□□ 1.95
MSX1-201ENST00000382723 MPP3Q13368 585 aa27.22■■□□□ 1.95
MSX1-201ENST00000382723 CASC4Q6P4E1 433 aa27.22■■□□□ 1.95
MSX1-201ENST00000382723 MRGPRX2Q96LB1 330 aa27.22■■□□□ 1.95
MSX1-201ENST00000382723 MARK1Q9P0L2 795 aa27.22■■□□□ 1.95
MSX1-201ENST00000382723 SDR42E2A6NKP2 422 aa27.21■■□□□ 1.95
MSX1-201ENST00000382723 SOX1O00570 391 aaPredicted RBP27.21■■□□□ 1.95
MSX1-201ENST00000382723 MT-CO1P00395 513 aa27.21■■□□□ 1.95
MSX1-201ENST00000382723 ARSAP15289 507 aa27.21■■□□□ 1.95
MSX1-201ENST00000382723 RGRP47804 291 aa27.21■■□□□ 1.95
MSX1-201ENST00000382723 EIF3BP55884 814 aaKnown RBP27.21■■□□□ 1.95
MSX1-201ENST00000382723 WNT3AP56704 352 aa27.21■■□□□ 1.95
MSX1-201ENST00000382723 CBLBQ13191 982 aa27.21■■□□□ 1.95
MSX1-201ENST00000382723 IHHQ14623 411 aa27.21■■□□□ 1.95
MSX1-201ENST00000382723 HSP90B2PQ58FF3 399 aa27.21■■□□□ 1.95
MSX1-201ENST00000382723 PITRM1Q5JRX3 1037 aa27.21■■□□□ 1.95
MSX1-201ENST00000382723 C3orf62Q6ZUJ4 267 aa27.21■■□□□ 1.95
MSX1-201ENST00000382723 LINC00523Q86TU6 105 aa27.21■■□□□ 1.95
MSX1-201ENST00000382723 GOLGA6L1Q8N7Z2 621 aa27.21■■□□□ 1.95
MSX1-201ENST00000382723 LRRC39Q96DD0 335 aa27.21■■□□□ 1.95
MSX1-201ENST00000382723 MGME1Q9BQP7 344 aa27.21■■□□□ 1.95
MSX1-201ENST00000382723 EBF3Q9H4W6 596 aa27.21■■□□□ 1.95
MSX1-201ENST00000382723 ZC3H7BQ9UGR2 993 aaKnown RBP27.21■■□□□ 1.95
MSX1-201ENST00000382723 SMIM23A6NLE4 172 aa27.2■■□□□ 1.95
MSX1-201ENST00000382723 H3BQF6 201 aa27.2■■□□□ 1.95
MSX1-201ENST00000382723 SYF2O95926 243 aaKnown RBP27.2■■□□□ 1.95
MSX1-201ENST00000382723 KDELC1Q6UW63 502 aa27.2■■□□□ 1.95
MSX1-201ENST00000382723 MSLNLQ96KJ4 702 aa27.2■■□□□ 1.95
MSX1-201ENST00000382723 TRIM56Q9BRZ2 755 aaKnown RBP27.2■■□□□ 1.95
MSX1-201ENST00000382723 POMKQ9H5K3 350 aa27.2■■□□□ 1.95
MSX1-201ENST00000382723 SYBUQ9NX95 663 aa27.2■■□□□ 1.95
MSX1-201ENST00000382723 FAM53CQ9NYF3 392 aa27.2■■□□□ 1.95
MSX1-201ENST00000382723 GGA2Q9UJY4 613 aa27.2■■□□□ 1.95
MSX1-201ENST00000382723 FCF1Q9Y324 198 aaKnown RBP27.2■■□□□ 1.95
MSX1-201ENST00000382723 C5orf42Q9H799 3197 aa27.2■■□□□ 1.94
MSX1-201ENST00000382723 A0A087WUV0 522 aaPredicted RBP27.2■■□□□ 1.94
MSX1-201ENST00000382723 K7ERQ8 282 aa27.2■■□□□ 1.94
MSX1-201ENST00000382723 ADH5P11766 374 aa27.2■■□□□ 1.94
MSX1-201ENST00000382723 TPH1P17752 444 aa27.2■■□□□ 1.94
MSX1-201ENST00000382723 SKOR1P84550 965 aa27.2■■□□□ 1.94
MSX1-201ENST00000382723 SLC12A1Q13621 1099 aa27.2■■□□□ 1.94
MSX1-201ENST00000382723 FUT11Q495W5 492 aa27.2■■□□□ 1.94
MSX1-201ENST00000382723 RETSATQ6NUM9 610 aa27.2■■□□□ 1.94
MSX1-201ENST00000382723 VITQ6UXI7 678 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms