RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 SLC15A2Q16348 729 aa5.93□□□□□ -1.46
RFX3-204ENST00000382004 HKDC1Q2TB90 917 aa5.93□□□□□ -1.46
RFX3-204ENST00000382004 ZNF549Q6P9A3 640 aa5.93□□□□□ -1.46
RFX3-204ENST00000382004 SPESP1Q6UW49 350 aa5.93□□□□□ -1.46
RFX3-204ENST00000382004 USP45Q70EL2 814 aa5.93□□□□□ -1.46
RFX3-204ENST00000382004 SLC4A11Q8NBS3 891 aa5.93□□□□□ -1.46
RFX3-204ENST00000382004 CXorf40AQ8TE69 158 aa5.93□□□□□ -1.46
RFX3-204ENST00000382004 SYN2Q92777 582 aaPredicted RBP5.93□□□□□ -1.46
RFX3-204ENST00000382004 RNF31Q96EP0 1072 aa5.93□□□□□ -1.46
RFX3-204ENST00000382004 TDRD1Q9BXT4 1180 aaKnown RBP5.93□□□□□ -1.46
RFX3-204ENST00000382004 CDHR2Q9BYE9 1310 aa5.93□□□□□ -1.46
RFX3-204ENST00000382004 TUBE1Q9UJT0 475 aa5.93□□□□□ -1.46
RFX3-204ENST00000382004 H0Y858 1186 aa5.93□□□□□ -1.46
RFX3-204ENST00000382004 KRT36O76013 467 aa5.93□□□□□ -1.46
RFX3-204ENST00000382004 PGAM1P18669 254 aa5.93□□□□□ -1.46
RFX3-204ENST00000382004 RRM1P23921 792 aa5.93□□□□□ -1.46
RFX3-204ENST00000382004 RPA3P35244 121 aaPredicted RBP5.93□□□□□ -1.46
RFX3-204ENST00000382004 GALNT3Q14435 633 aa5.93□□□□□ -1.46
RFX3-204ENST00000382004 DEPDC4Q8N2C3 294 aa5.93□□□□□ -1.46
RFX3-204ENST00000382004 CXorf40BQ96DE9 158 aa5.93□□□□□ -1.46
RFX3-204ENST00000382004 ZNF184Q99676 751 aaPredicted RBP5.93□□□□□ -1.46
RFX3-204ENST00000382004 TTLL2Q9BWV7 592 aa5.93□□□□□ -1.46
RFX3-204ENST00000382004 CKLFQ9UBR5 152 aa5.93□□□□□ -1.46
RFX3-204ENST00000382004 C15orf38-AP3S2A0A0A6YYH1 394 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 NCAM2O15394 837 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 RGS10O43665 173 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 AMPD1P23109 780 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 TCEA1P23193 301 aaKnown RBP5.92□□□□□ -1.46
RFX3-204ENST00000382004 ACAT1P24752 427 aaKnown RBP5.92□□□□□ -1.46
RFX3-204ENST00000382004 RPA1P27694 616 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 S100A2P29034 98 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 PPP1R26Q5T8A7 1209 aaPredicted RBP5.92□□□□□ -1.46
RFX3-204ENST00000382004 ARMC12Q5T9G4 340 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 CXorf57Q6NSI4 855 aaKnown RBP5.92□□□□□ -1.46
RFX3-204ENST00000382004 RAB11FIP2Q7L804 512 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 APTXQ7Z2E3 356 aaKnown RBP5.92□□□□□ -1.46
RFX3-204ENST00000382004 ARPINQ7Z6K5 226 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 TTC7BQ86TV6 843 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 AKAP14Q86UN6 197 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 RP9Q8TA86 221 aaKnown RBP5.92□□□□□ -1.46
RFX3-204ENST00000382004 FBXO25Q8TCJ0 367 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 TSEN15Q8WW01 171 aaKnown RBP5.92□□□□□ -1.46
RFX3-204ENST00000382004 FAIM2Q9BWQ8 316 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 KDM6AO15550 1401 aaPredicted RBP5.92□□□□□ -1.46
RFX3-204ENST00000382004 TSPAN4O14817 238 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 TPD52L2O43399 206 aaKnown RBP5.92□□□□□ -1.46
RFX3-204ENST00000382004 ULK1O75385 1050 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 CDH3P22223 829 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 SSTR1P30872 391 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 PDX1P52945 283 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 HSPA14Q0VDF9 509 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 RETSATQ6NUM9 610 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 TMED8Q6PL24 325 aaPredicted RBP5.92□□□□□ -1.46
RFX3-204ENST00000382004 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.92□□□□□ -1.46
RFX3-204ENST00000382004 ZFP28Q8NHY6 868 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 PIH1D2Q8WWB5 315 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 FAM84BQ96KN1 310 aaPredicted RBP5.92□□□□□ -1.46
RFX3-204ENST00000382004 FCRL4Q96PJ5 515 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 ALG9Q9H6U8 611 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 PLGRKTQ9HBL7 147 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 CISHQ9NSE2 258 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 VPS4AQ9UN37 437 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 ZNF780BQ9Y6R6 833 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 ZMPSTE24O75844 475 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 CST1P01037 141 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 CYP1A1P04798 512 aaPredicted RBP5.92□□□□□ -1.46
RFX3-204ENST00000382004 ZNF806P0C7X5 589 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 IGFBP4P22692 258 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 GSTT1P30711 240 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 POLR2LP62875 67 aaKnown RBP5.92□□□□□ -1.46
RFX3-204ENST00000382004 PFKPQ01813 784 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 IRF8Q02556 426 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 TNK2Q07912 1038 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 TBX2Q13207 712 aaPredicted RBP5.92□□□□□ -1.46
RFX3-204ENST00000382004 ACAP2Q15057 778 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 MPPE1Q53F39 396 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 BHLHB9Q6PI77 547 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 KIAA1324Q6UXG2 1013 aaKnown RBP5.92□□□□□ -1.46
RFX3-204ENST00000382004 C3orf67Q6ZVT6 689 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 HTRA1Q92743 480 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 NELL1Q92832 810 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 NKD1Q969G9 470 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 APOPT1Q96IL0 206 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 AIFM2Q9BRQ8 373 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 MARCH7Q9H992 704 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 OSGEPQ9NPF4 335 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 PRDM8Q9NQV8 689 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 GNPTGQ9UJJ9 305 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 IKZF2Q9UKS7 526 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 GSAPA4D1B5 854 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 TBC1D3BA6NDS4 549 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 ATF4P18848 351 aaPredicted RBP5.92□□□□□ -1.46
RFX3-204ENST00000382004 PSMD5Q16401 504 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 SCIMPQ6UWF3 145 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 SGMS1Q86VZ5 419 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 DNAAF5Q86Y56 855 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 C12orf56Q8IXR9 622 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 CHST13Q8NET6 341 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 OR10G6Q8NH81 332 aa5.92□□□□□ -1.46
RFX3-204ENST00000382004 ELMO3Q96BJ8 720 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms