RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 SLC8A2Q9UPR5 921 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 TARSL2A2RTX5 802 aaKnown RBP12.87□□□□□ -0.35
SMN1-202ENST00000380707 PRR33A8MZF0 331 aa12.87□□□□□ -0.35
SMN1-202ENST00000380707 HACD1B0YJ81 288 aa12.87□□□□□ -0.35
SMN1-202ENST00000380707 MCF2LO15068 1137 aa12.87□□□□□ -0.35
SMN1-202ENST00000380707 JCHAINP01591 159 aa12.87□□□□□ -0.35
SMN1-202ENST00000380707 RBL1P28749 1068 aa12.87□□□□□ -0.35
SMN1-202ENST00000380707 AVPR2P30518 371 aa12.87□□□□□ -0.35
SMN1-202ENST00000380707 MMP13P45452 471 aa12.87□□□□□ -0.35
SMN1-202ENST00000380707 RGRP47804 291 aa12.87□□□□□ -0.35
SMN1-202ENST00000380707 RENBPP51606 427 aa12.87□□□□□ -0.35
SMN1-202ENST00000380707 RHOAP61586 193 aa12.87□□□□□ -0.35
SMN1-202ENST00000380707 ZBTB17Q13105 803 aa12.87□□□□□ -0.35
SMN1-202ENST00000380707 STARD3Q14849 445 aa12.87□□□□□ -0.35
SMN1-202ENST00000380707 ATXN7L2Q5T6C5 722 aaPredicted RBP12.87□□□□□ -0.35
SMN1-202ENST00000380707 DARS2Q6PI48 645 aaKnown RBP12.87□□□□□ -0.35
SMN1-202ENST00000380707 MAMSTRQ6ZN01 415 aa12.87□□□□□ -0.35
SMN1-202ENST00000380707 DPY19L3Q6ZPD9 716 aa12.87□□□□□ -0.35
SMN1-202ENST00000380707 PGBD5Q8N414 524 aa12.87□□□□□ -0.35
SMN1-202ENST00000380707 NSMCE1Q8WV22 266 aa12.87□□□□□ -0.35
SMN1-202ENST00000380707 EXOC2Q96KP1 924 aa12.87□□□□□ -0.35
SMN1-202ENST00000380707 PSKH2Q96QS6 385 aa12.87□□□□□ -0.35
SMN1-202ENST00000380707 CINPQ9BW66 212 aaPredicted RBP12.87□□□□□ -0.35
SMN1-202ENST00000380707 AP1M1Q9BXS5 423 aa12.87□□□□□ -0.35
SMN1-202ENST00000380707 CEP41Q9BYV8 373 aa12.87□□□□□ -0.35
SMN1-202ENST00000380707 MKRN2Q9H000 416 aaKnown RBP12.87□□□□□ -0.35
SMN1-202ENST00000380707 RBM22Q9NW64 420 aaKnown RBP eCLIP12.87□□□□□ -0.35
SMN1-202ENST00000380707 SPATA6Q9NWH7 488 aaPredicted RBP12.87□□□□□ -0.35
SMN1-202ENST00000380707 SEPT10Q9P0V9 454 aa12.87□□□□□ -0.35
SMN1-202ENST00000380707 SEPT3Q9UH03 358 aa12.87□□□□□ -0.35
SMN1-202ENST00000380707 CACNA1IQ9P0X4 2223 aa12.86□□□□□ -0.35
SMN1-202ENST00000380707 TTC24A2A3L6 582 aaPredicted RBP12.86□□□□□ -0.35
SMN1-202ENST00000380707 BCLAF3A2AJT9 711 aaKnown RBP12.86□□□□□ -0.35
SMN1-202ENST00000380707 DLL1O00548 723 aa12.86□□□□□ -0.35
SMN1-202ENST00000380707 LIASO43766 372 aa12.86□□□□□ -0.35
SMN1-202ENST00000380707 GJB3O75712 270 aa12.86□□□□□ -0.35
SMN1-202ENST00000380707 TUBB4AP04350 444 aa12.86□□□□□ -0.35
SMN1-202ENST00000380707 CXCL12P48061 93 aa12.86□□□□□ -0.35
SMN1-202ENST00000380707 DGKEP52429 567 aa12.86□□□□□ -0.35
SMN1-202ENST00000380707 COPAP53621 1224 aa12.86□□□□□ -0.35
SMN1-202ENST00000380707 NRLP54845 237 aa12.86□□□□□ -0.35
SMN1-202ENST00000380707 IFI35P80217 286 aaPredicted RBP12.86□□□□□ -0.35
SMN1-202ENST00000380707 WASHC5Q12768 1159 aa12.86□□□□□ -0.35
SMN1-202ENST00000380707 SNX1Q13596 522 aa12.86□□□□□ -0.35
SMN1-202ENST00000380707 BYSLQ13895 437 aaKnown RBP12.86□□□□□ -0.35
SMN1-202ENST00000380707 ZNF235Q14590 738 aa12.86□□□□□ -0.35
SMN1-202ENST00000380707 OASLQ15646 514 aaKnown RBP12.86□□□□□ -0.35
SMN1-202ENST00000380707 CARD16Q5EG05 197 aa12.86□□□□□ -0.35
SMN1-202ENST00000380707 TMEM31Q5JXX7 168 aa12.86□□□□□ -0.35
SMN1-202ENST00000380707 PLPP6Q8IY26 295 aa12.86□□□□□ -0.35
SMN1-202ENST00000380707 STK40Q8N2I9 435 aa12.86□□□□□ -0.35
SMN1-202ENST00000380707 CNTD1Q8N815 330 aa12.86□□□□□ -0.35
SMN1-202ENST00000380707 PRELID2Q8N945 189 aa12.86□□□□□ -0.35
SMN1-202ENST00000380707 DTWD2Q8NBA8 298 aa12.86□□□□□ -0.35
SMN1-202ENST00000380707 CHST14Q8NCH0 376 aa12.86□□□□□ -0.35
SMN1-202ENST00000380707 OR2AP1Q8NGE2 309 aa12.86□□□□□ -0.35
SMN1-202ENST00000380707 OR6K2Q8NGY2 324 aa12.86□□□□□ -0.35
SMN1-202ENST00000380707 MAIP1Q8WWC4 291 aa12.86□□□□□ -0.35
SMN1-202ENST00000380707 HTR3CQ8WXA8 447 aa12.86□□□□□ -0.35
SMN1-202ENST00000380707 ZNF592Q92610 1267 aa12.86□□□□□ -0.35
SMN1-202ENST00000380707 VOPP1Q96AW1 172 aa12.86□□□□□ -0.35
SMN1-202ENST00000380707 HHIPQ96QV1 700 aa12.86□□□□□ -0.35
SMN1-202ENST00000380707 FAM129BQ96TA1 746 aa12.86□□□□□ -0.35
SMN1-202ENST00000380707 NAP1L3Q99457 506 aaPredicted RBP12.86□□□□□ -0.35
SMN1-202ENST00000380707 IL12RB2Q99665 862 aa12.86□□□□□ -0.35
SMN1-202ENST00000380707 FRMD8P1Q9BZ68 369 aaPredicted RBP12.86□□□□□ -0.35
SMN1-202ENST00000380707 SLC6A17Q9H1V8 727 aa12.86□□□□□ -0.35
SMN1-202ENST00000380707 USP29Q9HBJ7 922 aa12.86□□□□□ -0.35
SMN1-202ENST00000380707 NT5MQ9NPB1 228 aa12.86□□□□□ -0.35
SMN1-202ENST00000380707 CKAP5Q14008 2032 aa12.86□□□□□ -0.35
SMN1-202ENST00000380707 TCRBV21S2A2A0A5A6 115 aa12.85□□□□□ -0.35
SMN1-202ENST00000380707 KIF2AO00139 706 aaPredicted RBP12.85□□□□□ -0.35
SMN1-202ENST00000380707 RNF103O00237 685 aa12.85□□□□□ -0.35
SMN1-202ENST00000380707 PDE2AO00408 941 aaPredicted RBP12.85□□□□□ -0.35
SMN1-202ENST00000380707 GSRP00390 522 aa12.85□□□□□ -0.35
SMN1-202ENST00000380707 HLA-DQB2P05538 268 aa12.85□□□□□ -0.35
SMN1-202ENST00000380707 CTSLP07711 333 aa12.85□□□□□ -0.35
SMN1-202ENST00000380707 PTPN3P26045 913 aa12.85□□□□□ -0.35
SMN1-202ENST00000380707 GKP32189 559 aa12.85□□□□□ -0.35
SMN1-202ENST00000380707 CCR3P51677 355 aa12.85□□□□□ -0.35
SMN1-202ENST00000380707 CCNHP51946 323 aaPredicted RBP12.85□□□□□ -0.35
SMN1-202ENST00000380707 MAXP61244 160 aa12.85□□□□□ -0.35
SMN1-202ENST00000380707 SNRPD1P62314 119 aaKnown RBP12.85□□□□□ -0.35
SMN1-202ENST00000380707 NSUN2Q08J23 767 aaKnown RBP eCLIP12.85□□□□□ -0.35
SMN1-202ENST00000380707 ELAVL3Q14576 367 aaKnown RBP12.85□□□□□ -0.35
SMN1-202ENST00000380707 CCNG2Q16589 344 aa12.85□□□□□ -0.35
SMN1-202ENST00000380707 MYLK3Q32MK0 819 aa12.85□□□□□ -0.35
SMN1-202ENST00000380707 HEATR6Q6AI08 1181 aaKnown RBP12.85□□□□□ -0.35
SMN1-202ENST00000380707 CDKL3Q8IVW4 592 aaPredicted RBP12.85□□□□□ -0.35
SMN1-202ENST00000380707 C1orf210Q8IVY1 113 aa12.85□□□□□ -0.35
SMN1-202ENST00000380707 MAML2Q8IZL2 1156 aaPredicted RBP12.85□□□□□ -0.35
SMN1-202ENST00000380707 NKD2Q969F2 451 aaPredicted RBP12.85□□□□□ -0.35
SMN1-202ENST00000380707 NSMCE3Q96MG7 304 aa12.85□□□□□ -0.35
SMN1-202ENST00000380707 AGAP3Q96P47 875 aa12.85□□□□□ -0.35
SMN1-202ENST00000380707 TMEM121Q9BTD3 319 aa12.85□□□□□ -0.35
SMN1-202ENST00000380707 C1QTNF1Q9BXJ1 281 aa12.85□□□□□ -0.35
SMN1-202ENST00000380707 POLMQ9NP87 494 aaPredicted RBP12.85□□□□□ -0.35
SMN1-202ENST00000380707 SARDHQ9UL12 918 aa12.85□□□□□ -0.35
SMN1-202ENST00000380707 SSUH2Q9Y2M2 353 aa12.85□□□□□ -0.35
SMN1-202ENST00000380707 K7ESF4 209 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms