RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 RRP15Q9Y3B9 282 aaKnown RBP20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 MMP2P08253 660 aa20.14■□□□□ 0.81
PDLIM5-205ENST00000380180 ITGA2BP08514 1039 aa20.14■□□□□ 0.81
PDLIM5-205ENST00000380180 MBL2P11226 248 aaPredicted RBP20.14■□□□□ 0.81
PDLIM5-205ENST00000380180 GP5P40197 560 aa20.14■□□□□ 0.81
PDLIM5-205ENST00000380180 CREMQ03060 361 aa20.14■□□□□ 0.81
PDLIM5-205ENST00000380180 GNA12Q03113 381 aa20.14■□□□□ 0.81
PDLIM5-205ENST00000380180 PPIGQ13427 754 aaKnown RBP eCLIP20.14■□□□□ 0.81
PDLIM5-205ENST00000380180 IHHQ14623 411 aa20.14■□□□□ 0.81
PDLIM5-205ENST00000380180 GRTP1Q5TC63 336 aa20.14■□□□□ 0.81
PDLIM5-205ENST00000380180 CCDC117Q8IWD4 279 aaPredicted RBP20.14■□□□□ 0.81
PDLIM5-205ENST00000380180 ANKS4BQ8N8V4 417 aa20.14■□□□□ 0.81
PDLIM5-205ENST00000380180 MAGEH1Q9H213 219 aa20.14■□□□□ 0.81
PDLIM5-205ENST00000380180 IL21Q9HBE4 155 aa20.14■□□□□ 0.81
PDLIM5-205ENST00000380180 TRPC7Q9HCX4 862 aa20.14■□□□□ 0.81
PDLIM5-205ENST00000380180 PCMTD2Q9NV79 361 aa20.14■□□□□ 0.81
PDLIM5-205ENST00000380180 SSX2IPQ9Y2D8 614 aa20.14■□□□□ 0.81
PDLIM5-205ENST00000380180 PLLPQ9Y342 182 aa20.14■□□□□ 0.81
PDLIM5-205ENST00000380180 CXCL14O95715 111 aa20.14■□□□□ 0.81
PDLIM5-205ENST00000380180 ALDOAP04075 364 aaKnown RBP20.14■□□□□ 0.81
PDLIM5-205ENST00000380180 ALADP13716 330 aa20.14■□□□□ 0.81
PDLIM5-205ENST00000380180 CHRNA4P43681 627 aa20.14■□□□□ 0.81
PDLIM5-205ENST00000380180 CGB2Q6NT52 195 aa20.14■□□□□ 0.81
PDLIM5-205ENST00000380180 POTEHQ6S545 545 aa20.14■□□□□ 0.81
PDLIM5-205ENST00000380180 OR7D4Q8NG98 312 aa20.14■□□□□ 0.81
PDLIM5-205ENST00000380180 CLP1Q92989 425 aaKnown RBP20.14■□□□□ 0.81
PDLIM5-205ENST00000380180 PDFQ9HBH1 243 aa20.14■□□□□ 0.81
PDLIM5-205ENST00000380180 SLCO1B3Q9NPD5 702 aa20.14■□□□□ 0.81
PDLIM5-205ENST00000380180 VPS45Q9NRW7 570 aa20.14■□□□□ 0.81
PDLIM5-205ENST00000380180 INSL6Q9Y581 213 aa20.14■□□□□ 0.81
PDLIM5-205ENST00000380180 ANKRD36A6QL64 1941 aa20.13■□□□□ 0.81
PDLIM5-205ENST00000380180 TSPAN3O60637 253 aa20.13■□□□□ 0.81
PDLIM5-205ENST00000380180 CLDN11O75508 207 aa20.13■□□□□ 0.81
PDLIM5-205ENST00000380180 ITIH4Q14624 930 aa20.13■□□□□ 0.81
PDLIM5-205ENST00000380180 PABPC1LQ4VXU2 614 aaKnown RBP20.13■□□□□ 0.81
PDLIM5-205ENST00000380180 STRA8Q7Z7C7 330 aa20.13■□□□□ 0.81
PDLIM5-205ENST00000380180 ARL14EPQ8N8R7 260 aaPredicted RBP20.13■□□□□ 0.81
PDLIM5-205ENST00000380180 ARRDC2Q8TBH0 407 aa20.13■□□□□ 0.81
PDLIM5-205ENST00000380180 ZFRQ96KR1 1074 aaKnown RBP20.13■□□□□ 0.81
PDLIM5-205ENST00000380180 ALG13Q9NP73 1137 aaKnown RBP20.13■□□□□ 0.81
PDLIM5-205ENST00000380180 MKS1Q9NXB0 559 aa20.13■□□□□ 0.81
PDLIM5-205ENST00000380180 USP15Q9Y4E8 981 aaPredicted RBP20.13■□□□□ 0.81
PDLIM5-205ENST00000380180 GOLGA8TH3BQL2 631 aa20.12■□□□□ 0.81
PDLIM5-205ENST00000380180 HOXD9P28356 352 aaPredicted RBP20.12■□□□□ 0.81
PDLIM5-205ENST00000380180 SMAD3P84022 425 aaKnown RBP20.12■□□□□ 0.81
PDLIM5-205ENST00000380180 PDE1BQ01064 536 aa20.12■□□□□ 0.81
PDLIM5-205ENST00000380180 FPGSQ05932 587 aa20.12■□□□□ 0.81
PDLIM5-205ENST00000380180 TMCO4Q5TGY1 634 aa20.12■□□□□ 0.81
PDLIM5-205ENST00000380180 TXNDC8Q6A555 127 aa20.12■□□□□ 0.81
PDLIM5-205ENST00000380180 IL31Q6EBC2 164 aa20.12■□□□□ 0.81
PDLIM5-205ENST00000380180 TMC7Q7Z402 723 aa20.12■□□□□ 0.81
PDLIM5-205ENST00000380180 SLC25A41Q8N5S1 370 aa20.12■□□□□ 0.81
PDLIM5-205ENST00000380180 PPHLN1Q8NEY8 458 aaKnown RBP20.12■□□□□ 0.81
PDLIM5-205ENST00000380180 ARNT2Q9HBZ2 717 aa20.12■□□□□ 0.81
PDLIM5-205ENST00000380180 ATP13A1Q9HD20 1204 aa20.12■□□□□ 0.81
PDLIM5-205ENST00000380180 IARS2Q9NSE4 1012 aaKnown RBP20.12■□□□□ 0.81
PDLIM5-205ENST00000380180 PRKAG2Q9UGJ0 569 aa20.12■□□□□ 0.81
PDLIM5-205ENST00000380180 PHTF1Q9UMS5 762 aa20.12■□□□□ 0.81
PDLIM5-205ENST00000380180 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.12■□□□□ 0.81
PDLIM5-205ENST00000380180 TPP1O14773 563 aa20.12■□□□□ 0.81
PDLIM5-205ENST00000380180 KIAA0754O94854 1291 aa20.12■□□□□ 0.81
PDLIM5-205ENST00000380180 F7P08709 466 aaPredicted RBP20.12■□□□□ 0.81
PDLIM5-205ENST00000380180 CRHR1P34998 444 aa20.12■□□□□ 0.81
PDLIM5-205ENST00000380180 LILRA6Q6PI73 481 aa20.12■□□□□ 0.81
PDLIM5-205ENST00000380180 SPATA21Q7Z572 469 aa20.12■□□□□ 0.81
PDLIM5-205ENST00000380180 YTHDF3Q7Z739 585 aaKnown RBP20.12■□□□□ 0.81
PDLIM5-205ENST00000380180 RBBP8Q99708 897 aa20.12■□□□□ 0.81
PDLIM5-205ENST00000380180 SPON2Q9BUD6 331 aa20.12■□□□□ 0.81
PDLIM5-205ENST00000380180 MANSC1Q9H8J5 431 aa20.12■□□□□ 0.81
PDLIM5-205ENST00000380180 TCAF1Q9Y4C2 921 aa20.12■□□□□ 0.81
PDLIM5-205ENST00000380180 ACTL7AQ9Y615 435 aa20.12■□□□□ 0.81
PDLIM5-205ENST00000380180 ATXN2Q99700 1313 aaKnown RBP20.11■□□□□ 0.81
PDLIM5-205ENST00000380180 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.11■□□□□ 0.81
PDLIM5-205ENST00000380180 MUSKO15146 869 aa20.11■□□□□ 0.81
PDLIM5-205ENST00000380180 GJB3O75712 270 aa20.11■□□□□ 0.81
PDLIM5-205ENST00000380180 HDCP19113 662 aa20.11■□□□□ 0.81
PDLIM5-205ENST00000380180 SPRP35270 261 aaPredicted RBP20.11■□□□□ 0.81
PDLIM5-205ENST00000380180 ZXDBP98169 803 aa20.11■□□□□ 0.81
PDLIM5-205ENST00000380180 ZNF177Q13360 481 aaPredicted RBP20.11■□□□□ 0.81
PDLIM5-205ENST00000380180 PDPK2PQ6A1A2 396 aa20.11■□□□□ 0.81
PDLIM5-205ENST00000380180 HERC6Q8IVU3 1022 aa20.11■□□□□ 0.81
PDLIM5-205ENST00000380180 ACMSDQ8TDX5 336 aa20.11■□□□□ 0.81
PDLIM5-205ENST00000380180 TADA1Q96BN2 335 aa20.11■□□□□ 0.81
PDLIM5-205ENST00000380180 GRAMD1AQ96CP6 724 aa20.11■□□□□ 0.81
PDLIM5-205ENST00000380180 ZNF599Q96NL3 588 aa20.11■□□□□ 0.81
PDLIM5-205ENST00000380180 SEMA3CQ99985 751 aa20.11■□□□□ 0.81
PDLIM5-205ENST00000380180 ASB3Q9Y575 518 aa20.11■□□□□ 0.81
PDLIM5-205ENST00000380180 A0A1B0GVM2 712 aa20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 TCAF2A6NFQ2 919 aa20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 SCAMP3O14828 347 aaKnown RBP20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 EDF1O60869 148 aaKnown RBP20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 EN2P19622 333 aaPredicted RBP20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 GABRR2P28476 465 aa20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 SERPINB4P48594 390 aa20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 ZNF235Q14590 738 aa20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 TMEM240Q5SV17 173 aa20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 RNF187Q5TA31 235 aaPredicted RBP20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 ESRP1Q6NXG1 681 aaKnown RBP20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 GAREM2Q75VX8 874 aa20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 CHST9Q7L1S5 443 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms